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Report for CCDS5859.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
5859.1 Public Homo sapiens 7 SLC37A3 24 110 108 CCDS HistoryNCBI Gene:84255Re-query CCDS DB by CCDS ID:5859.1Re-query CCDS DB by GeneID:84255See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 5859.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000326232.14 ENSP00000321498.9 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000326232.14Link to Ensembl Protein Viewer:ENSP00000321498.9Re-query CCDS DB by Nucleotide ID:ENST00000326232Re-query CCDS DB by Protein ID:ENSP00000321498
Original member Current member NCBI NM_207113.3 NP_996996.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_207113.3Link to Protein Sequence:NP_996996.1Re-query CCDS DB by Nucleotide ID:NM_207113Re-query CCDS DB by Protein ID:NP_996996Link to BLAST:NP_996996.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_996996.1 494 Q8NCC5-1 494 100% 0 0

Chromosomal Locations for CCDS 5859.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 7 (NC_000007.14)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 140335412 140335504 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 140337284 140337349 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 140343412 140343563 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 140345216 140345263 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 140345869 140345970 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 140348626 140348767 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 140351273 140351451 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 140352062 140352146 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 140355668 140355764 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 140358640 140358785 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 140364408 140364491 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 140369590 140369682 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 140380282 140380390 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 140382438 140382526 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1485 nt):
ATGGCCTGGCCAAATGTTTTTCAAAGAGGGTCTCTGCTGTCCCAGTTCAGCCATCATCATGTTGTAGTGT
TCCTGCTCACTTTCTTCAGTTATTCGTTGCTCCATGCTTCACGAAAAACATTTAGCAATGTCAAAGTCAG
TATCTCTGAGCAGTGGACCCCAAGTGCTTTTAACACGTCAGTTGAGCTGCCTGTGGAGATCTGGAGCAGC
AACCATTTGTTCCCCAGTGCAGAGAAAGCGACTCTTTTCCTCGGCACACTGGATACCATTTTCCTCTTCT
CCTATGCTGTGGGCCTATTCATCAGTGGCATCGTTGGGGATCGGTTGAATTTGCGATGGGTTCTGTCTTT
TGGCATGTGCTCTTCTGCATTAGTGGTGTTTGTCTTTGGTGCGCTCACAGAATGGCTGCGTTTCTACAAC
AAATGGCTGTACTGCTGCCTGTGGATTGTGAACGGCCTGCTGCAGTCCACTGGTTGGCCCTGTGTGGTTG
CTGTTATGGGCAACTGGTTTGGGAAAGCCGGACGAGGAGTTGTTTTTGGTCTCTGGAGTGCCTGTGCTTC
GGTGGGCAACATTTTGGGAGCGTGCCTAGCTTCTTCTGTTCTTCAGTATGGTTATGAGTATGCCTTTCTG
GTGACGGCGTCTGTGCAGTTTGCTGGTGGGATCGTTATCTTCTTTGGACTCCTGGTGTCACCAGAAGAAA
TTGGTCTCTCGGGTATTGAGGCAGAAGAAAACTTTGAAGAAGACTCACACAGGCCATTAATTAATGGTGG
TGAAAATGAAGACGAATATGAGCCGAATTATTCAATCCAAGATGATAGTTCTGTTGCCCAAGTCAAGGCG
ATAAGCTTCTACCAGGCATGTTGCCTTCCTGGAGTCATACCGTACTCACTGGCCTACGCCTGCTTGAAGT
TAGTGAATTACTCCTTCTTCTTCTGGCTCCCCTTTTATCTGAGTAACAACTTCGGCTGGAAGGAGGCGGA
AGCCGACAAGCTGTCCATTTGGTACGACGTTGGAGGGATCATAGGTGGAACTTTGCAAGGCTTCATCTCT
GATGTACTACAGAAGAGAGCGCCGGTTCTTGCCCTGAGTCTGCTTCTGGCAGTTGGGTCCCTCATCGGGT
ATAGTCGTTCTCCAAATGATAAGTCCATCAATGCCCTTCTGATGACTGTTACAGGATTTTTTATTGGTGG
ACCTTCTAATATGATTAGTTCTGCTATTTCTGCGGACTTGGGTCGCCAGGAGCTCATCCAAAGGAGCAGT
GAAGCTTTGGCCACTGTCACAGGAATTGTGGATGGTTCGGGGAGCATTGGAGCTGCAGTGGGCCAGTATT
TAGTGTCTCTGATCCGGGACAAGCTAGGATGGATGTGGGTTTTCTACTTTTTCATTCTCATGACAAGTTG
TACAATTGTGTTTATCTCGCCATTAATAGTGAGGGAAATATTCTCTCTCGTGCTAAGGAGACAGGCTCAC
ATATTGAGGGAGTGA

Translation (494 aa):
MAWPNVFQRGSLLSQFSHHHVVVFLLTFFSYSLLHASRKTFSNVKVSISEQWTPSAFNTSVELPVEIWSS
NHLFPSAEKATLFLGTLDTIFLFSYAVGLFISGIVGDRLNLRWVLSFGMCSSALVVFVFGALTEWLRFYN
KWLYCCLWIVNGLLQSTGWPCVVAVMGNWFGKAGRGVVFGLWSACASVGNILGACLASSVLQYGYEYAFL
VTASVQFAGGIVIFFGLLVSPEEIGLSGIEAEENFEEDSHRPLINGGENEDEYEPNYSIQDDSSVAQVKA
ISFYQACCLPGVIPYSLAYACLKLVNYSFFFWLPFYLSNNFGWKEAEADKLSIWYDVGGIIGGTLQGFIS
DVLQKRAPVLALSLLLAVGSLIGYSRSPNDKSINALLMTVTGFFIGGPSNMISSAISADLGRQELIQRSS
EALATVTGIVDGSGSIGAAVGQYLVSLIRDKLGWMWVFYFFILMTSCTIVFISPLIVREIFSLVLRRQAH
ILRE


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
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