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Report for CCDS33058.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
33058.1 Public Homo sapiens 19 IGFL3 24 110 108 CCDS HistoryNCBI Gene:388555Re-query CCDS DB by CCDS ID:33058.1Re-query CCDS DB by GeneID:388555See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 33058.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000341415.3 ENSP00000344860.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000341415.3Link to Ensembl Protein Viewer:ENSP00000344860.2Re-query CCDS DB by Nucleotide ID:ENST00000341415Re-query CCDS DB by Protein ID:ENSP00000344860
Original member Current member NCBI NM_207393.2 NP_997276.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_207393.2Link to Protein Sequence:NP_997276.1Re-query CCDS DB by Nucleotide ID:NM_207393Re-query CCDS DB by Protein ID:NP_997276Link to BLAST:NP_997276.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_997276.1 125 Q6UXB1 125 100% 0 0

Chromosomal Locations for CCDS 33058.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 46120330 46120357 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 46123886 46124156 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 46124268 46124321 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 46124625 46124649 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (378 nt):
ATGAGGCCACGATGCTGCATCTTGGCTCTTGTCTGCTGGATAACAGTCTTCCTCCTCCAGTGTTCAAAAG
GAACTACAGACGCTCCTGTTGGCTCAGGACTGTGGCTGTGCCAGCCGACACCCAGGTGTGGGAACAAGAT
CTACAACCCTTCAGAGCAGTGCTGTTATGATGATGCCATCTTATCCTTAAAGGAGACCCGCCGCTGTGGC
TCCACCTGCACCTTCTGGCCCTGCTTTGAGCTCTGCTGTCCCGAGTCTTTTGGCCCCCAGCAGAAGTTTC
TTGTGAAGTTGAGGGTTCTGGGTATGAAGTCTCAGTGTCACTTATCTCCCATCTCCCGGAGCTGTACCAG
GAACAGGAGGCACGTCCTGTACCCATAA

Translation (125 aa):
MRPRCCILALVCWITVFLLQCSKGTTDAPVGSGLWLCQPTPRCGNKIYNPSEQCCYDDAILSLKETRRCG
STCTFWPCFELCCPESFGPQQKFLVKLRVLGMKSQCHLSPISRSCTRNRRHVLYP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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