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Report for CCDS34644.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
34644.1 Public Homo sapiens 7 ZNF680 24 110 108 CCDS HistoryNCBI Gene:340252Re-query CCDS DB by CCDS ID:34644.1Re-query CCDS DB by GeneID:340252See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 34644.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000309683.11 ENSP00000309330.6 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000309683.11Link to Ensembl Protein Viewer:ENSP00000309330.6Re-query CCDS DB by Nucleotide ID:ENST00000309683Re-query CCDS DB by Protein ID:ENSP00000309330
Original member Current member NCBI NM_178558.5 NP_848653.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_178558.5Link to Protein Sequence:NP_848653.2Re-query CCDS DB by Nucleotide ID:NM_178558Re-query CCDS DB by Protein ID:NP_848653Link to BLAST:NP_848653.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_848653.2 530 Q8NEM1-1 530 100% 0 0

Chromosomal Locations for CCDS 34644.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 7 (NC_000007.14)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 64521161 64522500 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 64543707 64543802 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 64544306 64544432 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 64562925 64562954 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1593 nt):
ATGCCAGGACCACCTGGAAGCCTAGAAATGGGACCACTGACATTTAGGGATGTGGCCATAGAATTCTCTC
TGGAGGAGTGGCAATGCCTGGACACTGCACAACGGAATTTATATAGGAAAGTGATGTTTGAGAACTACAG
AAACCTGGTCTTCCTGGGTATTGCTGTCTCTAAGCCTCACCTGATAACCTGTTTGGAGCAAGGAAAAGAG
CCCTGGAATAGGAAGAGACAGGAGATGGTAGCCAAACCCCCAGTTATATATTCTCATTTCACTGAAGACC
TTTGGCCAGAGCATAGCATAAAAGATTCTTTTCAAAAAGTGATACTGAGAGGATATGGAAAATGTGGACA
TGAGAATTTACAATTAAGAATAAGTTGTAAAAGTGTGGATGAGTCTAAGGTGTTCAAAGAAGGTTATAAT
GAACTTAACCAATGTTTGAGAACTACCCAGAGCAAAATATTTCAATGTGATAAATACGTGAAAGTCTTTC
ATAAATTTTCAAATTCAAACAGTCATAAGAAAAGAAATACTGGAAAGAAGGTTTTCAAATGTAAAGAATG
TGGCAAATCATTTTGCATGCTTTCACATCTAACACAACATATAAGAATTCACACTAGAGAGAATTCTTAC
AAATGTGAGGAATGTGGCAAAGTTCTTAACTGGTTCTCAGAGCTTATTAAACATAAGGGAATTCATATGG
GAGAGAAACCCTACAAATGTGAGGAATGTGGCAAAGCCTTTAACCAATCCTCAACCCTTATTAAACATAA
GAAAATTCATATTGAAGAGAAACCCTTCAAATGTGAAGAATGTGGCAAAGCCTTTAGTTTATTCTCAATC
CTTAGTAAACATAAGATAATTCATACTGGAGACAAACCTTACAAATGTGATGAATGTCACAAAGCCTTTA
ACTGGTTTGCAACCCTTACTAACCATAAGAGAATTCATACTGGAGAGAAACCCTTCAAATGTGAAGAATG
TGGCAAAGACTTTAACCAGTTTTCAAACCTTACTAAACATAAGAAAATTCATACTGGAGAGAAACCCTAC
AAATGTGAAGAATGTGGCAAAGCTTTTAACCAGTTTGCAAACCTTACTAGACATAAGAAAATTCATACTG
GAGAGAAATCCTACAAATGTGAAGAATGCGGCAAAGCTTTTATACAGTCCTCAAACCTTACTGAACATAT
GAGAATTCATACTGGAGAGAAACCCTACAAATGTGAAGAATGTGGCAAAGCTTTTAATGGGTGCTCCAGC
CTTACTCGACATAAGAGAATTCACACTAGAGAGAATACCTACAAATGTGAAGAATGTGGCAAAGGCTTTA
CTTTATTTTCAACCCTTACTAACCATAAAGTAATTCATACTGGAGAGAAATCCTACAAATGTGATGAATG
TGGCAATGTTTTTAACTGGCCTGCAACTCTTGCTAATCATAAGAGAATTCATGCTAGAGAGAAACCCTAC
AAATGTGAAGAATGTGGCAAAGCTTTTAACCGGTCCTCACACCTTACTAGACATAAGAAAATTCATACTG
GTGAGAAACTCTACAAACCTGAAAAATGTGACAATAATTTTGATAACACCTAA

Translation (530 aa):
MPGPPGSLEMGPLTFRDVAIEFSLEEWQCLDTAQRNLYRKVMFENYRNLVFLGIAVSKPHLITCLEQGKE
PWNRKRQEMVAKPPVIYSHFTEDLWPEHSIKDSFQKVILRGYGKCGHENLQLRISCKSVDESKVFKEGYN
ELNQCLRTTQSKIFQCDKYVKVFHKFSNSNSHKKRNTGKKVFKCKECGKSFCMLSHLTQHIRIHTRENSY
KCEECGKVLNWFSELIKHKGIHMGEKPYKCEECGKAFNQSSTLIKHKKIHIEEKPFKCEECGKAFSLFSI
LSKHKIIHTGDKPYKCDECHKAFNWFATLTNHKRIHTGEKPFKCEECGKDFNQFSNLTKHKKIHTGEKPY
KCEECGKAFNQFANLTRHKKIHTGEKSYKCEECGKAFIQSSNLTEHMRIHTGEKPYKCEECGKAFNGCSS
LTRHKRIHTRENTYKCEECGKGFTLFSTLTNHKVIHTGEKSYKCDECGNVFNWPATLANHKRIHAREKPY
KCEECGKAFNRSSHLTRHKKIHTGEKLYKPEKCDNNFDNT


Links Key
 Links to:   History report
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  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
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