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Report for CCDS14592.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
14592.1 Public Homo sapiens X NKAP 24 110 108 CCDS HistoryNCBI Gene:79576Re-query CCDS DB by CCDS ID:14592.1Re-query CCDS DB by GeneID:79576See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 14592.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000371410.5 ENSP00000360464.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000371410.5Link to Ensembl Protein Viewer:ENSP00000360464.3Re-query CCDS DB by Nucleotide ID:ENST00000371410Re-query CCDS DB by Protein ID:ENSP00000360464
Original member Current member NCBI NM_024528.4 NP_078804.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_024528.4Link to Protein Sequence:NP_078804.2Re-query CCDS DB by Nucleotide ID:NM_024528Re-query CCDS DB by Protein ID:NP_078804Link to BLAST:NP_078804.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_078804.2 415 Q8N5F7 415 100% 0 0

Chromosomal Locations for CCDS 14592.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome X (NC_000023.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 119925220 119925394 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 119930016 119930165 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 119931936 119932011 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 119932107 119932216 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 119934494 119934557 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 119936297 119936431 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 119936612 119936682 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 119938730 119938810 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 119943220 119943605 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1248 nt):
ATGGCTCCGGTGTCCGGCTCACGCAGCCCGGATAGGGAGGCCTCGGGCTCGGGGGGAAGACGTCGCAGTT
CGTCGAAGAGTCCGAAGCCCAGCAAATCTGCCCGCTCCCCGCGGGGCCGCCGCTCTCGCTCGCACTCTTG
CTCTCGGTCCGGGGACCGGAATGGACTCACCCATCAGCTGGGTGGCCTCAGCCAAGGCTCCCGAAACCAG
TCCTACCGCTCACGCTCGCGGTCGCGTTCTAGAGAGCGGCCCTCTGCGCCCCGGGGCATCCCCTTCGCTT
CTGCCTCCTCGTCAGTCTATTACGGCAGCTACTCGCGCCCCTACGGGAGCGACAAGCCTTGGCCTAGCCT
CCTCGACAAGGAGAGGGAGGAGAGCCTGCGGCAGAAGAGATTAAGTGAGAGAGAGAGAATTGGAGAATTG
GGAGCTCCTGAAGTATGGGGACTTTCTCCAAAGAATCCTGAACCAGATTCTGATGAACATACACCAGTGG
AGGATGAAGAGCCAAAGAAAAGCACTACTTCAGCTTCTACTTCAGAAGAAGAAAAAAAGAAGAAGTCTAG
CCGTTCAAAAGAAAGGTCCAAGAAAAGGAGAAAGAAAAAATCATCGAAAAGAAAACATAAGAAGTATTCT
GAAGATAGCGACAGTGACTCTGATTCTGAAACAGACTCCAGTGATGAAGATAACAAAAGGAGAGCAAAGA
AAGCCAAGAAAAAGGAAAAGAAGAAGAAACACAGATCGAAGAAATATAAGAAAAAGAGGTCTAAGAAGAG
CAGAAAAGAGTCCAGTGATTCAAGCTCTAAAGAATCCCAAGAAGAGTTTCTGGAAAATCCCTGGAAGGAT
CGAACAAAGGCTGAAGAACCATCAGATTTAATTGGCCCAGAGGCTCCAAAAACACTTACCTCTCAAGATG
ATAAACCTTTGAACTATGGCCATGCTCTGTTACCTGGTGAAGGTGCAGCTATGGCTGAATATGTAAAAGC
TGGAAAACGTATCCCACGAAGAGGTGAAATTGGCTTGACAAGTGAAGAAATTGCATCATTTGAATGCTCA
GGTTATGTAATGAGTGGTAGCAGGCATCGCCGAATGGAGGCTGTGCGACTGCGAAAAGAGAACCAGATCT
ACAGTGCTGATGAGAAGAGAGCCCTTGCATCCTTTAACCAAGAAGAGAGACGAAAGAGAGAGAACAAGAT
TCTGGCCAGTTTTCGAGAAATGGTTTACAGAAAGACCAAAGGGAAGGATGACAAATAA

Translation (415 aa):
MAPVSGSRSPDREASGSGGRRRSSSKSPKPSKSARSPRGRRSRSHSCSRSGDRNGLTHQLGGLSQGSRNQ
SYRSRSRSRSRERPSAPRGIPFASASSSVYYGSYSRPYGSDKPWPSLLDKEREESLRQKRLSERERIGEL
GAPEVWGLSPKNPEPDSDEHTPVEDEEPKKSTTSASTSEEEKKKKSSRSKERSKKRRKKKSSKRKHKKYS
EDSDSDSDSETDSSDEDNKRRAKKAKKKEKKKKHRSKKYKKKRSKKSRKESSDSSSKESQEEFLENPWKD
RTKAEEPSDLIGPEAPKTLTSQDDKPLNYGHALLPGEGAAMAEYVKAGKRIPRRGEIGLTSEEIASFECS
GYVMSGSRHRRMEAVRLRKENQIYSADEKRALASFNQEERRKRENKILASFREMVYRKTKGKDDK


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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