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Report for CCDS7354.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
7354.1 Public Homo sapiens 10 POLR3A 24 110 108 CCDS HistoryNCBI Gene:11128Re-query CCDS DB by CCDS ID:7354.1Re-query CCDS DB by GeneID:11128See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 7354.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000372371.8 ENSP00000361446.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000372371.8Link to Ensembl Protein Viewer:ENSP00000361446.3Re-query CCDS DB by Nucleotide ID:ENST00000372371Re-query CCDS DB by Protein ID:ENSP00000361446
Original member Current member NCBI NM_007055.4 NP_008986.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_007055.4Link to Protein Sequence:NP_008986.2Re-query CCDS DB by Nucleotide ID:NM_007055Re-query CCDS DB by Protein ID:NP_008986Link to BLAST:NP_008986.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_008986.2 1390 O14802 1390 100% 0 0

Chromosomal Locations for CCDS 7354.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 10 (NC_000010.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 77977478 77977626 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 77980141 77980273 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 77981428 77981559 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 77982154 77982318 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 77982653 77982817 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 77983920 77984012 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 77984205 77984298 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 77985170 77985340 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 77985903 77985985 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 77986073 77986159 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 77991054 77991167 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 77993197 77993367 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 77999981 78000118 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 78000976 78001094 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 78002197 78002308 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 78004716 78004888 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 78007702 78007866 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 78009537 78009675 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 78009864 78009991 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 78010471 78010540 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 78013650 78013790 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 78017575 78017716 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 78019162 78019265 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 78021546 78021682 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 78021860 78022022 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 78022145 78022384 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 78024549 78024703 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 78024971 78025142 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 78025622 78025759 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 78026094 78026229 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 78029364 78029407 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (4173 nt):
ATGGTGAAGGAGCAGTTCCGGGAGACGGATGTGGCCAAGAAAATAAGCCACATCTGTTTTGGAATGAAGT
CACCTGAGGAGATGCGCCAGCAGGCGCACATCCAAGTTGTGAGTAAGAACCTGTACAGCCAGGACAACCA
ACATGCCCCCTTGCTATATGGGGTGCTCGACCATAGGATGGGTACGAGTGAGAAGGATCGTCCATGTGAA
ACCTGTGGGAAAAACTTGGCTGACTGTCTAGGCCACTATGGGTATATCGACCTGGAGTTGCCGTGTTTTC
ATGTAGGGTACTTCAGAGCAGTCATAGGCATCTTACAGATGATCTGCAAAACCTGCTGCCACATCATGCT
GTCCCAAGAGGAGAAGAAGCAGTTTCTGGACTATCTAAAGAGGCCCGGCCTGACCTACCTTCAGAAGCGA
GGACTGAAAAAGAAAATCTCTGACAAGTGCCGGAAGAAAAACATCTGCCATCACTGTGGCGCTTTTAATG
GTACCGTAAAGAAGTGTGGACTGCTGAAAATAATTCATGAGAAATACAAGACCAACAAAAAAGTGGTGGA
TCCCATTGTATCAAATTTCCTTCAGTCTTTTGAAACAGCCATTGAACATAATAAAGAAGTGGAGCCTCTG
CTGGGAAGGGCACAGGAAAACTTGAATCCCTTAGTAGTTCTGAATTTATTTAAACGAATCCCAGCTGAAG
ATGTTCCTCTACTTCTGATGAACCCAGAAGCCGGAAAGCCGTCTGATTTGATTCTCACACGACTTTTGGT
GCCTCCTTTGTGTATCAGACCCTCCGTTGTGAGTGATTTGAAGTCTGGCACCAATGAAGATGATCTGACA
ATGAAACTGACAGAAATCATTTTCCTAAACGATGTTATTAAAAAGCATCGGATCTCAGGAGCCAAGACCC
AGATGATCATGGAGGACTGGGATTTCCTGCAGCTGCAGTGTGCCCTCTACATTAACAGTGAGCTCTCGGG
CATTCCCCTCAACATGGCACCCAAGAAGTGGACCAGAGGCTTCGTCCAACGCCTGAAGGGAAAACAGGGT
CGATTTAGAGGAAATCTCTCAGGAAAGAGAGTGGATTTTTCTGGCAGAACAGTCATCTCGCCCGACCCCA
ACCTCCGGATTGATGAGGTAGCTGTGCCAGTTCATGTGGCCAAAATTCTAACTTTTCCTGAGAAGGTAAA
CAAAGCAAACATCAATTTCTTGAGGAAACTGGTTCAAAACGGCCCTGAGGTTCACCCAGGAGCAAACTTC
ATTCAGCAGAGACATACGCAGATGAAAAGGTTTTTGAAATACGGAAATCGAGAAAAGATGGCTCAAGAGC
TCAAGTATGGTGACATCGTAGAGAGACACCTCATCGATGGAGATGTGGTGCTGTTCAATCGGCAGCCCTC
GCTGCACAAATTGAGCATTATGGCTCATCTGGCCAGGGTCAAGCCCCACCGGACCTTCAGATTTAATGAG
TGTGTCTGTACACCCTATAATGCTGACTTTGATGGTGATGAAATGAACCTTCATCTTCCTCAAACAGAAG
AAGCTAAAGCAGAGGCCCTTGTTCTGATGGGGACTAAAGCAAATCTTGTAACCCCGAGGAATGGGGAACC
GCTGATTGCTGCTATTCAGGATTTTCTAACAGGTGCCTATCTCCTCACTCTCAAGGACACTTTCTTTGAT
CGAGCCAAGGCTTGCCAAATCATTGCTTCAATACTGGTTGGCAAGGATGAGAAAATTAAAGTTCGCCTCC
CACCGCCTACAATCCTAAAGCCTGTCACCCTGTGGACGGGAAAGCAGATCTTCAGTGTCATCCTCAGGCC
TAGCGATGACAATCCAGTGAGGGCCAACCTGCGAACCAAGGGCAAGCAGTACTGTGGCAAAGGGGAAGAT
CTCTGTGCCAATGATTCCTATGTTACAATCCAGAACAGTGAGTTGATGAGTGGCAGCATGGACAAAGGAA
CCCTAGGGTCAGGATCCAAGAACAATATTTTTTACATTTTGCTGCGAGACTGGGGACAGAATGAAGCTGC
AGATGCCATGTCACGGCTCGCCAGGCTGGCTCCTGTCTACCTGTCTAACCGTGGTTTCTCAATTGGGATC
GGTGATGTCACACCTGGCCAAGGACTGCTGAAGGCCAAGTATGAGTTGCTGAATGCCGGCTACAAGAAAT
GTGATGAGTACATCGAAGCCCTGAACACGGGCAAGCTGCAGCAGCAGCCTGGCTGCACTGCTGAGGAGAC
CCTGGAGGCACTGATCCTGAAGGAGCTGTCTGTGATCCGTGACCACGCTGGCAGTGCCTGCCTCCGGGAG
CTGGACAAGAGCAACAGCCCCCTCACCATGGCTCTGTGCGGCTCCAAAGGTTCCTTCATTAACATATCAC
AGATGATTGCCTGTGTGGGACAGCAGGCCATCAGTGGCTCTCGAGTGCCAGACGGCTTTGAAAACAGGTC
CTTGCCTCATTTTGAAAAACACTCAAAGCTCCCAGCTGCCAAAGGCTTTGTGGCTAATAGCTTTTATTCC
GGTTTGACACCAACTGAGTTTTTCTTCCACACAATGGCCGGCCGGGAAGGTCTAGTCGACACGGCTGTAA
AGACAGCTGAAACGGGATACATGCAGCGAAGGCTTGTCAAATCTCTTGAAGATCTTTGCTCCCAGTATGA
TCTGACAGTCCGAAGCTCTACTGGCGATATTATCCAGTTCATTTATGGAGGAGATGGCTTAGATCCTGCA
GCTATGGAGGGAAAAGATGAACCTTTGGAGTTTAAAAGGGTTCTGGACAACATCAAAGCAGTCTTCCCGT
GTCCCAGTGAGCCTGCTCTCAGCAAAAACGAGCTGATCCTGACCACAGAGTCCATCATGAAGAAGAGTGA
GTTCCTCTGCTGCCAGGACAGCTTCCTGCAGGAAATAAAAAAATTCATTAAGGGGGTCTCTGAGAAGATC
AAGAAAACCAGAGATAAATATGGCATCAATGATAACGGCACAACAGAGCCCCGTGTGCTGTACCAGCTGG
ACCGCATCACCCCCACCCAAGTAGAAAAGTTTCTGGAGACCTGTAGGGACAAGTACATGAGGGCACAGAT
GGAGCCAGGTTCTGCAGTGGGTGCTCTGTGTGCCCAGAGCATTGGTGAGCCAGGCACCCAGATGACCCTG
AAGACTTTCCACTTTGCAGGTGTGGCCTCCATGAACATCACCCTGGGCGTGCCCCGGATTAAAGAGATCA
TCAACGCTTCCAAGGCCATCAGCACTCCAATTATCACAGCACAGCTAGACAAGGATGACGACGCGGATTA
TGCTCGCCTCGTGAAAGGGAGAATTGAGAAAACCCTCTTGGGAGAGATTTCCGAGTATATTGAAGAAGTG
TTTCTTCCTGATGACTGCTTTATTCTCGTCAAGCTCTCCCTGGAACGGATTAGGCTTCTGAGACTGGAAG
TGAACGCTGAGACAGTGAGATATTCCATCTGCACATCCAAGCTCCGTGTGAAGCCCGGTGATGTGGCTGT
TCATGGTGAGGCTGTGGTGTGTGTCACCCCCAGAGAGAACAGCAAGAGCTCCATGTACTACGTGCTGCAG
TTCCTGAAAGAGGATCTCCCCAAGGTGGTGGTGCAGGGCATTCCAGAGGTGTCCAGAGCTGTCATCCACA
TTGACGAGCAGAGTGGAAAGGAGAAGTACAAGCTTCTGGTGGAAGGTGATAACCTGCGGGCAGTCATGGC
CACACACGGTGTGAAGGGCACCCGAACCACCTCCAATAACACCTATGAGGTGGAGAAAACTCTGGGCATC
GAGGCCGCCCGGACAACGATCATCAATGAAATCCAGTACACCATGGTGAACCACGGCATGAGCATCGACA
GGAGGCACGTGATGCTGCTCTCCGACCTCATGACCTACAAGGGTGAAGTCCTGGGCATCACTAGGTTTGG
CCTGGCCAAGATGAAGGAGAGTGTGCTGATGCTGGCCTCCTTTGAGAAGACGGCTGACCATCTCTTTGAC
GCTGCCTACTTCGGGCAGAAGGACTCTGTGTGTGGGGTGTCTGAGTGCATCATCATGGGAATCCCAATGA
ACATTGGAACCGGGCTCTTCAAGCTGCTTCACAAGGCTGACAGGGACCCGAACCCTCCCAAGAGGCCCCT
GATCTTCGACACAAATGAATTCCACATCCCCCTTGTCACATAG

Translation (1390 aa):
MVKEQFRETDVAKKISHICFGMKSPEEMRQQAHIQVVSKNLYSQDNQHAPLLYGVLDHRMGTSEKDRPCE
TCGKNLADCLGHYGYIDLELPCFHVGYFRAVIGILQMICKTCCHIMLSQEEKKQFLDYLKRPGLTYLQKR
GLKKKISDKCRKKNICHHCGAFNGTVKKCGLLKIIHEKYKTNKKVVDPIVSNFLQSFETAIEHNKEVEPL
LGRAQENLNPLVVLNLFKRIPAEDVPLLLMNPEAGKPSDLILTRLLVPPLCIRPSVVSDLKSGTNEDDLT
MKLTEIIFLNDVIKKHRISGAKTQMIMEDWDFLQLQCALYINSELSGIPLNMAPKKWTRGFVQRLKGKQG
RFRGNLSGKRVDFSGRTVISPDPNLRIDEVAVPVHVAKILTFPEKVNKANINFLRKLVQNGPEVHPGANF
IQQRHTQMKRFLKYGNREKMAQELKYGDIVERHLIDGDVVLFNRQPSLHKLSIMAHLARVKPHRTFRFNE
CVCTPYNADFDGDEMNLHLPQTEEAKAEALVLMGTKANLVTPRNGEPLIAAIQDFLTGAYLLTLKDTFFD
RAKACQIIASILVGKDEKIKVRLPPPTILKPVTLWTGKQIFSVILRPSDDNPVRANLRTKGKQYCGKGED
LCANDSYVTIQNSELMSGSMDKGTLGSGSKNNIFYILLRDWGQNEAADAMSRLARLAPVYLSNRGFSIGI
GDVTPGQGLLKAKYELLNAGYKKCDEYIEALNTGKLQQQPGCTAEETLEALILKELSVIRDHAGSACLRE
LDKSNSPLTMALCGSKGSFINISQMIACVGQQAISGSRVPDGFENRSLPHFEKHSKLPAAKGFVANSFYS
GLTPTEFFFHTMAGREGLVDTAVKTAETGYMQRRLVKSLEDLCSQYDLTVRSSTGDIIQFIYGGDGLDPA
AMEGKDEPLEFKRVLDNIKAVFPCPSEPALSKNELILTTESIMKKSEFLCCQDSFLQEIKKFIKGVSEKI
KKTRDKYGINDNGTTEPRVLYQLDRITPTQVEKFLETCRDKYMRAQMEPGSAVGALCAQSIGEPGTQMTL
KTFHFAGVASMNITLGVPRIKEIINASKAISTPIITAQLDKDDDADYARLVKGRIEKTLLGEISEYIEEV
FLPDDCFILVKLSLERIRLLRLEVNAETVRYSICTSKLRVKPGDVAVHGEAVVCVTPRENSKSSMYYVLQ
FLKEDLPKVVVQGIPEVSRAVIHIDEQSGKEKYKLLVEGDNLRAVMATHGVKGTRTTSNNTYEVEKTLGI
EAARTTIINEIQYTMVNHGMSIDRRHVMLLSDLMTYKGEVLGITRFGLAKMKESVLMLASFEKTADHLFD
AAYFGQKDSVCGVSECIIMGIPMNIGTGLFKLLHKADRDPNPPKRPLIFDTNEFHIPLVT


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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