CCDS Home FTP Process Releases & Statistics
Collaborators EBI HGNC MGI NCBI
Contact Us email CCDS
Genome Displays Related Resources Gene HomoloGene MANE RefSeq
|
|
Report for CCDS2082.1 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
2082.1 |
Public |
Homo sapiens |
2 |
RGPD5 |
24 |
110 |
108 |
|
Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23
Review status: Reviewed (by RefSeq and Havana) Sequence IDs included in CCDS 2082.1
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
MANE |
Status in CCDS |
Seq. Status |
Links |
---|
|
|
EBI |
ENST00000016946.8 |
ENSP00000016946.3 |
MANE Select |
Accepted |
alive |
|
|
|
NCBI |
NM_005054.3 |
NP_005045.2 |
MANE Select |
Accepted |
alive |
|
RefSeq |
Length |
Related UniProtKB/SwissProt |
Length |
Identity |
Gaps |
Mismatches |
NP_005045.2 |
1765 |
Q99666-1 |
1765 |
100% |
0 |
0 |
Chromosomal Locations for CCDS 2082.1
Assembly GRCh38.p14 (GCF_000001405.40)
CCDS Sequence Data |
---|
Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (5298 nt): ATGAGGCGCAGCAAGGCCGATGTGGAGCGGTACGTCGCCTCGGTGCTGGGTCTCACCCCGTCGCCTCGAC AGAAGTCAATGAAAGGATTCTATTTTGCAAAGCTGTATTATGAAGCTAAAGAATATGATCTTGCTAAAAA ATACATATGTACTTACATTAATGTGCAAGAGAGGGATCCCAAAGCTCACAGATTTCTGGGTCTTCTTTAT GAATTGGAAGAAAACACAGAGAAAGCCGTTGAATGTTACAGGCGTTCAGTGGAATTAAACCCAACACAAA AAGATCTTGTGTTGAAGATTGCAGAATTGCTTTGTAAAAATGATGTTACTGATGGAAGAGCAAAATACTG GGTCGAAAGAGCAGCAAAACTTTTCCCAGGAAGTCCTGCAATTTATAAACTAAAGGAACAGCTTCTAGAT TGTGAAGGTGAAGATGGATGGAATAAACTTTTTGACTTGATTCAGTCAGAACTTTATGTAAGACCTGATG ACGTCCATGTGAACATCCGGCTAGTGGAGTTGTATCGCTCAACTAAAAGATTGAAGGATGCTGTGGCCCA CTGCCATGAGGCAGAGAGGAACATAGCTTTGCGTTCAAGTTTAGAGTGGAATTCGTGTGTTGTACAGACC CTTAAGGAATATCTGGAGTCTTTACAGTGTTTGGAGTCTGATAAAAGTGACTGGCAAGCAACCAATACAG ACTTACTGCTGGCCTATGCTAATCTTATGCTTCTTACGCTTTCCACTAGAGATGTGCAGGAAAATAGAGA ATTACTGGAAAGTTTTGATAGTGCTCTTCAGTCTGCGAAATCTTCTTTGGGTGGAAATGATGAACTGTCA GCTACTTTCTTAGAAATGAAAGGACATTTCTATATGTATGCTGGTTCTCTGCTCTTGAAGATGGGTCAGC ATGGTAATAATGTTCAATGGCGAGCTCTTTCTGAGCTGGCTGCATTGTGCTATCTCATAGCATTTCAGGT TCCAAGACCAAAGATTAAATTAAGAGAAGGTAAAGCTGGACAAAATCTGCTGGAAATGATGGCCTGTGAC CGACTGAGCCAATCAGGGCACATGTTGCTAAGCTTAAGTCGTGGCAAGCAAGATTTCTTAAAAGAGGTTG TTGAAACTTTTGCCAACAAAATTGGGCAGTCTGCGTTATATGATGCTCTGTTTTCTAGTCAGTCACCTAA GGATACATCTTTTCTTGGTAGCGATGATATTGGAAAAATTGATGTACAAGAACCAGAGCTTGAAGATTTG GCTAGATACGATGTTGGTGCTATTCGAGCACATAATGGTAGTCTTCAGCATCTTACTTGGCTTGGCTTAC AGTGGAATTCATTGCCTGCTTTACCTGGAATCCGAAAATGGCTAAAACAGCTTTTCCATCGTTTGCCCCA TGAAACCTCAAGGCTTGAAACAAATGCGCCTGAATCAATATGTATTTTAGATCTTGAAGTATTTCTCCTT GGAGTAGTATATACCAGCCACTTACAATTAAAGGAGAAATGTAATTCTCACCATAGCTCCTATCAGCCGT TATGCCTGCCCTTTCCTGTGTGTAAACAGCTTTGTACAGAAAGACAAAAATCTTGGTGGGATGCGGTTTG TACTCTGATTCACAGAAAAGCAGTACCTGGAAACTTGGCAAAATTGAGACTTCTAGTTCAGCATGAAATA AACACTCTAAGAGCCCAGGAAAAACATGGCCTTCAACCTGCTCTGCTTGTACATTGGGCAAAATACCTTC AGAAAACGGGCAGCGGTCTTAATTCTTTTTATGGTCAACTAGAATACATAGGGAGAAGTGTTCATTATTG GAAGAAAGTTTTGCCATTGTTGAAGATAATAAAGAAGAACAGTATTCCTGAACCTATTGATCCTCTGTTT AAACATTTTCATAGTGTAGACATTCAGGCATCAGAAATTGTTGAATATGAAGAAGACGCACACATAACTT TTGCTATGTTGGATGCAGTAAATGGAAATATAGAAGATGCTGTGACTGCTTTTGAATCTATAAAAAGTGT TGTTTCTTATTGGAATCTTGCACTGATTTTTCACAGGAAGGCAGAAGACATTGAAAATGATGCCCTTTCT CCTGAAGAACAAGAAGAATGCAGAAATTATCTGACAAAGACCAGGGACTACCTAATAAAGATTATAGATG ACGGTGATTCAAATCTTTCAGTGGTCAAGAAATTGCCTGTGCCCCTGGAGTCTGTAAAACAGATGCTTAA TTCAGTCATGCAGGAACTCGAAGACTATAGTGAAGGAGGTCCTCTCTATAAAAATGGTTCTTTGCGAAAT GCAGATTCAGAAATAAAACATTCTACACCGTCTCCTACCAAATATTCACTATCACCAAGTAAAAGTTACA AGTATTCTCCCGAAACACCACCTCGATGGACAGAAGATCGGAATTCTTTACTGAATATGATTTGCCAACA AGTAGAGGCCATTAAGAAAGAAATGCAGGAGTTGAAACTAAATAGCAGTAAGTCAGCATCCCGTCATCGT TGGCCCACAGAGAATTATGGACCAGACTCGGTGCCTGATGGATATCAGGGGTCACAGACATTTCATGGGG CTCCACTAACAGTTGCAACTACTGGCCCTTCAGTATATTATAGTCAGTCACCAGCATATAATTCCCAGTA TCTTCTCAGACCAGCAGCTAATGTTACTCCCACAAAGGGTTCTTCTAATACAGAATTTAAGTCAACCAAA GAAGGATTTTCCATCCCTGTGTCTGCTGATGGATTTAAATTTGGCATTTCGGAACCAGGAAATCAAGAAA AGAAAAGGGAAAAGCCTCTTGAAAATGATACTGGCTTCCAGGCTCAGGATATTAGTGGCCGGAAGAAGGG CCGTGGTGTGATTTTTGGCCAAACAAGTAGCACTTTTACATTTGCAGATGTTGCAAAATCAACTTCAGGA GAAGGATTTCAGTTTGGCAAAAAAGACCTCAATTTCAAGGGATTTTCAGGTGCTGGAGAAAAATTATTCT CATCACGATACGGTAAAATGGCCAATAAAGCAAACACTTCCGGTGACTTTGAGAAAGATGATGATGCCTA TAAGACTGAGGACAGCGATGACATCCATTTTGAACCAGTAGTTCAAATGCCTGAAAAAGTAGAACTTGTA ACAGGAGAAGAAGGTGAAAAAGTTCTGTATTCACAGGGGGTAAAACTATTTAGATTTGATGCTGAGGTAA GGCAGTGGAAAGAAAGGGGCTTGGGGAACTTAAAAATTCTCAAAAACGAGGTCAATGGCAAACTAAGAAT GCTGATGCGAAGAGAACAAGTACTAAAAGTGTGTGCTAATCATTGGATAACGACTACAATGAACCTGAAG CCCCTCTCTGGATCAGATAGAGCATGGATGTGGTCAGCCAGTGATTTCTCTGACGGTGATGCCAAACTAG AGCGGTTGGCAGCAAAATTTAAAACACCAGAGCTGGCTGAAGAATTCAAGCAGAAATTTGAGGAATGCCA GCGGCTTCTGTTAGACATACCACTTCAAACTCCCCATAAACTTGTAGATACTGGCAGAGCTGCCAAGTTA ATACAGAGAGCTGAAGAAATGAAGAGTGGACTGAAAGATTTCAAAACATTTTTGACAAATGATCAAACAA AAGTCACTGAGGAAGAAAATAAGGGTTCAGGTACAGGTGCGGCCGGTGCCTCAGACACAACAATAAAACC CAATGCTGAAAACACTGGGCCCACATTAGAATGGGATAACTATGACTTAAGGGAAGATGCTTTGGATGAT AGTGTCAGTAGTAGCTCAGTACATGCTTCTCCATTGGCAAGTAGCCCTGTGAGAAAAAATCTTTTCCGCT TTGATGAGTCAACAACAGGATCTAACTTCAGTTTTAAATCTGCTTTGAGTCTATCTAAGTCTCCTGCCAA GTTGAATCAGAGTGGGACTTCAGTTGGCACTGATGAAGAATCTGTTGTTACTCAAGAAGAAGAGAGAGAT GGACAGTACTTTGAACCTGTTGTTCCTTTACCTGATCTAGTTGAAGTATCCAGTGGTGAGGAAAATGAAC AAGTTGTTTTTAGTCACAGGGCAGAAATCTACAGATATGATAAAGATGTTGGTCAATGGAAAGAAAGGGG CATTGGTGATATAAAGATTTTACAGAATTATGATAATAAGCAAGTTCGTATAGTGATGAGAAGGGACCAA GTATTAAAACTTTGTGCCAATCACAGAATAACTCCAGACATGAGTTTGCAAAATATGAAAGGGACAGAAA GAGTATGGGTGTGGACTGCATGTGATTTTGCAGATGGAGAAAGAAAAGTAGAGCATTTAGCTGTTCGTTT TAAACTACAGGATGTTGCAGACTCGTTTAAGAAAATTTTTGATGAAGCAAAAACAGCCCAGGAAAAAGAT TCTTTGATAACACCTCATGTTTCTCGGTCAAGCACTCCCAGAGAGTCACCATGTGGCAAAATTGCTGTAG CTATATTAGAAGAAACCACAAGAGAGAGGACAGATGTTATTCAGGGTGATGATGTAGCAGATGCAGCTTC AGAAGTTGAAGTGTCTAGCACATCTGAAACAACAACAAAAGCAGTGGTTTCTCCTCCAAAGTTTGTATTT GTTTCAGAGTCTGTTAAAAGAATTTTTAGTAGTGAAAAATCAAAACCATTTGTATTTGGCAACAGTTCTG CCACTGGGTCTTTGTTTGGATTTAGTTTTAATGCACCTTTGAAAAGTAACAATAGTGAAACTAGTTCAGT AGCCCAGAGTGGATCTGAAAGCAAAGTGGAACCTAAAAAATGTGAACTGTCAAAGAACTCTGATATCGAA CAGTCTTCAGATAGCAAAGTCAAAAATCTCTCTGCTTCCTTTCCAACGGAAGAATCTTCAATCAACTACA CATTTAAAACACCAGAAAAGGAGCCTCCATTATGGCATGCTGAATTTACCAAAGAAGAATTGGTTCAGAA GCTCCGTTCCACCACAAAAAGTGCAGATCACTTAAACGGCCTGCTTCGGGAAATAGAGGCAACCAATGCA GTCCTTATGGAGCAAATTAAGCTTCTCAAAAGTGAAATAAGAAGATTGGAAAGGAATCAAGAGCGAGAGA AGTCTGCAGCTAACCTGGAATACTTGAAGAACGTCTTGCTGCAGTTCATTTTCTTGAAGCCAGGTAGTGA AAGAGAGAGACTTCTTCCTGTTATAAATACGATGTTGCAGCTCAGCCCTGAAGAAAAGGGAAAACTTGCT GCGGTTGCTCAAGATGAGGAAGAAAATGCTTCCCGTTCTTCTGGATGA
Translation (1765 aa): MRRSKADVERYVASVLGLTPSPRQKSMKGFYFAKLYYEAKEYDLAKKYICTYINVQERDPKAHRFLGLLY ELEENTEKAVECYRRSVELNPTQKDLVLKIAELLCKNDVTDGRAKYWVERAAKLFPGSPAIYKLKEQLLD CEGEDGWNKLFDLIQSELYVRPDDVHVNIRLVELYRSTKRLKDAVAHCHEAERNIALRSSLEWNSCVVQT LKEYLESLQCLESDKSDWQATNTDLLLAYANLMLLTLSTRDVQENRELLESFDSALQSAKSSLGGNDELS ATFLEMKGHFYMYAGSLLLKMGQHGNNVQWRALSELAALCYLIAFQVPRPKIKLREGKAGQNLLEMMACD RLSQSGHMLLSLSRGKQDFLKEVVETFANKIGQSALYDALFSSQSPKDTSFLGSDDIGKIDVQEPELEDL ARYDVGAIRAHNGSLQHLTWLGLQWNSLPALPGIRKWLKQLFHRLPHETSRLETNAPESICILDLEVFLL GVVYTSHLQLKEKCNSHHSSYQPLCLPFPVCKQLCTERQKSWWDAVCTLIHRKAVPGNLAKLRLLVQHEI NTLRAQEKHGLQPALLVHWAKYLQKTGSGLNSFYGQLEYIGRSVHYWKKVLPLLKIIKKNSIPEPIDPLF KHFHSVDIQASEIVEYEEDAHITFAMLDAVNGNIEDAVTAFESIKSVVSYWNLALIFHRKAEDIENDALS PEEQEECRNYLTKTRDYLIKIIDDGDSNLSVVKKLPVPLESVKQMLNSVMQELEDYSEGGPLYKNGSLRN ADSEIKHSTPSPTKYSLSPSKSYKYSPETPPRWTEDRNSLLNMICQQVEAIKKEMQELKLNSSKSASRHR WPTENYGPDSVPDGYQGSQTFHGAPLTVATTGPSVYYSQSPAYNSQYLLRPAANVTPTKGSSNTEFKSTK EGFSIPVSADGFKFGISEPGNQEKKREKPLENDTGFQAQDISGRKKGRGVIFGQTSSTFTFADVAKSTSG EGFQFGKKDLNFKGFSGAGEKLFSSRYGKMANKANTSGDFEKDDDAYKTEDSDDIHFEPVVQMPEKVELV TGEEGEKVLYSQGVKLFRFDAEVRQWKERGLGNLKILKNEVNGKLRMLMRREQVLKVCANHWITTTMNLK PLSGSDRAWMWSASDFSDGDAKLERLAAKFKTPELAEEFKQKFEECQRLLLDIPLQTPHKLVDTGRAAKL IQRAEEMKSGLKDFKTFLTNDQTKVTEEENKGSGTGAAGASDTTIKPNAENTGPTLEWDNYDLREDALDD SVSSSSVHASPLASSPVRKNLFRFDESTTGSNFSFKSALSLSKSPAKLNQSGTSVGTDEESVVTQEEERD GQYFEPVVPLPDLVEVSSGEENEQVVFSHRAEIYRYDKDVGQWKERGIGDIKILQNYDNKQVRIVMRRDQ VLKLCANHRITPDMSLQNMKGTERVWVWTACDFADGERKVEHLAVRFKLQDVADSFKKIFDEAKTAQEKD SLITPHVSRSSTPRESPCGKIAVAILEETTRERTDVIQGDDVADAASEVEVSSTSETTTKAVVSPPKFVF VSESVKRIFSSEKSKPFVFGNSSATGSLFGFSFNAPLKSNNSETSSVAQSGSESKVEPKKCELSKNSDIE QSSDSKVKNLSASFPTEESSINYTFKTPEKEPPLWHAEFTKEELVQKLRSTTKSADHLNGLLREIEATNA VLMEQIKLLKSEIRRLERNQEREKSAANLEYLKNVLLQFIFLKPGSERERLLPVINTMLQLSPEEKGKLA AVAQDEEENASRSSG
|