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Report for CCDS5509.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
5509.1 Public Homo sapiens 7 ZPBP 24 110 108 CCDS HistoryNCBI Gene:11055Re-query CCDS DB by CCDS ID:5509.1Re-query CCDS DB by GeneID:11055See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 5509.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000046087.7 ENSP00000046087.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000046087.7Link to Ensembl Protein Viewer:ENSP00000046087.2Re-query CCDS DB by Nucleotide ID:ENST00000046087Re-query CCDS DB by Protein ID:ENSP00000046087
Original member Current member NCBI NM_007009.3 NP_008940.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_007009.3Link to Protein Sequence:NP_008940.2Re-query CCDS DB by Nucleotide ID:NM_007009Re-query CCDS DB by Protein ID:NP_008940Link to BLAST:NP_008940.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_008940.2 351 Q9BS86-1 351 100% 0 0

Chromosomal Locations for CCDS 5509.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 7 (NC_000007.14)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 49937528 49937622 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 49983342 49983519 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 50018240 50018316 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 50031092 50031310 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 50057989 50058141 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 50081774 50081899 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 50089629 50089709 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 50093068 50093194 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1056 nt):
ATGGAGGCCTTCGCCCTTGGCCCAGCGCGGCGGGGCAGGCGGCGGACCCGGGCCGCCGGCTCCCTGCTCT
CTCGGGCCGCCATCCTCCTCTTTATCTCCGCCTTCCTGGTGCGGGTGCCCTCATCAGTTGGACACTTGGT
TCGATTACCAAGAGCTTTTCGCTTGACCAAAGATTCAGTGAAAATAGTGGGATCAACAAGTTTTCCAGTG
AAAGCGTATGTCATGCTCCATCAAAAGAGTCCACACGTGTTATGTGTAACGCAACAACTGCGAAATGCTG
AACTGATAGACCCATCATTCCAATGGTATGGGCCTAAAGGAAAAGTTGTTTCAGTAGAAAACCGCACTGC
ACAAATAACATCCACAGGAAGCCTTGTATTCCAAAATTTTGAGGAGAGTATGAGTGGAATTTATACATGT
TTCCTCGAATATAAACCTACTGTGGAAGAAATTGTTAAACGTCTTCAACTAAAATATGCTATATATGCTT
ATCGTGAGCCTCATTATTATTATCAGTTCACAGCTCGATATCATGCAGCTCCCTGCAATAGCATTTATAA
TATTTCTTTTGAGAAGAAACTTCTTCAGATTTTAAGCAAACTGCTTCTTGACCTTTCATGTGAAATTTCC
TTACTTAAGTCTGAATGCCATCGCGTTAAAATGCAAAGAGCTGGTTTGCAAAATGAATTGTTCTTTGCAT
TTTCAGTTTCATCTCTAGACACTGAAAAAGGACCCAAGCGATGTACAGACCATAACTGTGAACCTTACAA
AAGACTTTTTAAGGCTAAAAATCTCATAGAGAGATTTTTTAATCAACAAGTAGAAATTCTTGGCAGACGT
GCAGAACAATTACCTCAAATATACTATATTGAAGGTACTCTCCAAATGGTTTGGATTAATCGCTGCTTTC
CAGGATATGGAATGAATGTCCAGCAACATCCAAAATGTCCTGAGTGCTGTGTGATCTGCAGCCCTGGATC
ATATAACCCCCGTGATGGAATTCATTGCCTTCAATGCAATAGCAGCCTGGTGTATGGAGCAAAAACGTGC
TTATAA

Translation (351 aa):
MEAFALGPARRGRRRTRAAGSLLSRAAILLFISAFLVRVPSSVGHLVRLPRAFRLTKDSVKIVGSTSFPV
KAYVMLHQKSPHVLCVTQQLRNAELIDPSFQWYGPKGKVVSVENRTAQITSTGSLVFQNFEESMSGIYTC
FLEYKPTVEEIVKRLQLKYAIYAYREPHYYYQFTARYHAAPCNSIYNISFEKKLLQILSKLLLDLSCEIS
LLKSECHRVKMQRAGLQNELFFAFSVSSLDTEKGPKRCTDHNCEPYKRLFKAKNLIERFFNQQVEILGRR
AEQLPQIYYIEGTLQMVWINRCFPGYGMNVQQHPKCPECCVICSPGSYNPRDGIHCLQCNSSLVYGAKTC
L


Links Key
 Links to:   History report
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  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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