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Report for CCDS76048.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
76048.1 Public Homo sapiens X MAGEA12 24 110 108 CCDS HistoryNCBI Gene:4111Re-query CCDS DB by CCDS ID:76048.1Re-query CCDS DB by GeneID:4111See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 17, NCBI annotation release 106, Ensembl annotation release 76

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 76048.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000357916.8 ENSP00000350592.4 Accepted alive Link to Ensembl Transcript Viewer:ENST00000357916.8Link to Ensembl Protein Viewer:ENSP00000350592.4Re-query CCDS DB by Nucleotide ID:ENST00000357916Re-query CCDS DB by Protein ID:ENSP00000350592
Original member Current member EBI ENST00000393869.8 ENSP00000377447.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000393869.8Link to Ensembl Protein Viewer:ENSP00000377447.3Re-query CCDS DB by Nucleotide ID:ENST00000393869Re-query CCDS DB by Protein ID:ENSP00000377447
Original member Current member EBI ENST00000393900.4 ENSP00000377478.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000393900.4Link to Ensembl Protein Viewer:ENSP00000377478.3Re-query CCDS DB by Nucleotide ID:ENST00000393900Re-query CCDS DB by Protein ID:ENSP00000377478
Original member Current member NCBI NM_001166386.3 NP_001159858.1 Accepted alive Link to Nucleotide Sequence:NM_001166386.3Link to Protein Sequence:NP_001159858.1Re-query CCDS DB by Nucleotide ID:NM_001166386Re-query CCDS DB by Protein ID:NP_001159858Link to BLAST:NP_001159858.1
Original member Current member NCBI NM_001166387.4 NP_001159859.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001166387.4Link to Protein Sequence:NP_001159859.1Re-query CCDS DB by Nucleotide ID:NM_001166387Re-query CCDS DB by Protein ID:NP_001159859Link to BLAST:NP_001159859.1
Original member Current member NCBI NM_005367.7 NP_005358.2 Accepted alive Link to Nucleotide Sequence:NM_005367.7Link to Protein Sequence:NP_005358.2Re-query CCDS DB by Nucleotide ID:NM_005367Re-query CCDS DB by Protein ID:NP_005358Link to BLAST:NP_005358.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001159858.1 314 P43365 314 100% 0 0
NP_001159859.1 314 P43365 314 100% 0 0
NP_005358.2 314 P43365 314 100% 0 0

Chromosomal Locations for CCDS 76048.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome X (NC_000023.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 152736162 152737106 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (945 nt):
ATGCCACTTGAGCAGAGGAGTCAGCACTGCAAGCCTGAGGAAGGCCTTGAGGCCCAAGGAGAGGCCCTGG
GCTTGGTGGGTGCGCAGGCTCCTGCTACTGAGGAGCAGGAGACTGCCTCCTCCTCCTCTACTCTAGTGGA
AGTCACCCTGCGGGAGGTGCCTGCTGCCGAGTCACCAAGTCCTCCCCACAGTCCTCAGGGAGCCTCCACC
CTCCCCACTACCATCAACTATACTCTCTGGAGTCAATCCGATGAGGGCTCCAGCAACGAAGAACAGGAAG
GGCCAAGCACCTTTCCTGACCTGGAGACGAGCTTCCAAGTAGCACTCAGTAGGAAGATGGCTGAGTTGGT
TCATTTTCTGCTCCTCAAGTATCGAGCCAGGGAGCCATTCACAAAGGCAGAAATGCTGGGGAGTGTCATC
AGAAATTTCCAGGACTTCTTTCCTGTGATCTTCAGCAAAGCCTCCGAGTACTTGCAGCTGGTCTTTGGCA
TCGAGGTGGTGGAAGTGGTCCGCATCGGCCACTTGTACATCCTTGTCACCTGCCTGGGCCTCTCCTACGA
TGGCCTGCTGGGCGACAATCAGATCGTGCCCAAGACAGGCCTCCTGATAATCGTCCTGGCCATAATCGCA
AAAGAGGGCGACTGTGCCCCTGAGGAGAAAATCTGGGAGGAGCTGAGTGTGTTGGAGGCATCTGATGGGA
GGGAGGACAGTGTCTTTGCGCATCCCAGGAAGCTGCTCACCCAAGATTTGGTGCAGGAAAACTACCTGGA
GTACCGGCAGGTCCCCGGCAGTGATCCTGCATGCTACGAGTTCCTGTGGGGTCCAAGGGCCCTCGTTGAA
ACCAGCTATGTGAAAGTCCTGCACCATTTGCTAAAGATCAGTGGAGGACCTCACATTTCCTACCCACCCC
TGCATGAATGGGCTTTTAGAGAGGGGGAAGAGTGA

Translation (314 aa):
MPLEQRSQHCKPEEGLEAQGEALGLVGAQAPATEEQETASSSSTLVEVTLREVPAAESPSPPHSPQGAST
LPTTINYTLWSQSDEGSSNEEQEGPSTFPDLETSFQVALSRKMAELVHFLLLKYRAREPFTKAEMLGSVI
RNFQDFFPVIFSKASEYLQLVFGIEVVEVVRIGHLYILVTCLGLSYDGLLGDNQIVPKTGLLIIVLAIIA
KEGDCAPEEKIWEELSVLEASDGREDSVFAHPRKLLTQDLVQENYLEYRQVPGSDPACYEFLWGPRALVE
TSYVKVLHHLLKISGGPHISYPPLHEWAFREGEE


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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