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Report for CCDS43333.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
43333.1 Public Homo sapiens 5 S100Z 24 110 108 CCDS HistoryNCBI Gene:170591Re-query CCDS DB by CCDS ID:43333.1Re-query CCDS DB by GeneID:170591See the combined annotation on chromosome 5 in Sequence Viewer

Public since: CCDS release 5, NCBI annotation release 36.3, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 43333.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000317593.9 ENSP00000320430.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000317593.9Link to Ensembl Protein Viewer:ENSP00000320430.4Re-query CCDS DB by Nucleotide ID:ENST00000317593Re-query CCDS DB by Protein ID:ENSP00000320430
Original member Current member EBI ENST00000513010.5 ENSP00000426768.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000513010.5Link to Ensembl Protein Viewer:ENSP00000426768.1Re-query CCDS DB by Nucleotide ID:ENST00000513010Re-query CCDS DB by Protein ID:ENSP00000426768
Original member Current member EBI ENST00000613039.1 ENSP00000483535.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000613039.1Link to Ensembl Protein Viewer:ENSP00000483535.1Re-query CCDS DB by Nucleotide ID:ENST00000613039Re-query CCDS DB by Protein ID:ENSP00000483535
Original member Current member NCBI NM_130772.4 NP_570128.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_130772.4Link to Protein Sequence:NP_570128.2Re-query CCDS DB by Nucleotide ID:NM_130772Re-query CCDS DB by Protein ID:NP_570128Link to BLAST:NP_570128.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_570128.2 99 Q8WXG8 99 100% 0 0

Chromosomal Locations for CCDS 43333.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 5 (NC_000005.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5See the combined annotation on chromosome 5 in Sequence Viewer

Chromosome Start Stop Links
5 76875360 76875500 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 76877674 76877832 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (300 nt):
ATGCCCACCCAGCTCGAGATGGCCATGGACACCATGATTAGAATCTTCCACCGCTATTCTGGCAAGGAAA
GGAAGAGATTCAAGCTCAGCAAGGGGGAACTGAAACTGCTCCTGCAGCGAGAGCTCACGGAATTCCTCTC
GTGCCAAAAGGAAACCCAGTTGGTTGATAAGATAGTGCAGGACCTGGATGCCAATAAGGACAACGAAGTG
GATTTTAATGAATTCGTGGTCATGGTGGCAGCTCTGACAGTTGCTTGTAATGATTACTTTGTAGAACAAT
TGAAGAAGAAAGGAAAATAA

Translation (99 aa):
MPTQLEMAMDTMIRIFHRYSGKERKRFKLSKGELKLLLQRELTEFLSCQKETQLVDKIVQDLDANKDNEV
DFNEFVVMVAALTVACNDYFVEQLKKKGK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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