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Report for CCDS44275.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
44275.1 Public Homo sapiens 1 NTMT2 24 110 108 CCDS HistoryNCBI Gene:149281Re-query CCDS DB by CCDS ID:44275.1See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 44275.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000439373.3 ENSP00000408058.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000439373.3Link to Ensembl Protein Viewer:ENSP00000408058.3Re-query CCDS DB by Nucleotide ID:ENST00000439373Re-query CCDS DB by Protein ID:ENSP00000408058
Original member Current member NCBI NM_001136107.2 NP_001129579.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001136107.2Link to Protein Sequence:NP_001129579.1Re-query CCDS DB by Nucleotide ID:NM_001136107Re-query CCDS DB by Protein ID:NP_001129579Link to BLAST:NP_001129579.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001129579.1 283 Q5VVY1 283 100% 0 0

Chromosomal Locations for CCDS 44275.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 170146108 170146261 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 170160518 170160693 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 170166502 170166751 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 170167486 170167757 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (852 nt):
ATGGCCCACCGGGGAGCCCATTTTGCCTTTAGATCCCGCTGGCAGAAGACCGACGATGAACTCTGTAGAC
ATAGCATGTCTTTTATCCTTCACAAAGCCATTCGCAATGACTTCTTTCAGAGCTATCTCTACCTGCTGGA
AAAAATTCCCCTGGTGAAATTGTACGCTTTAACAAGCCAAGTCATCAATGGTGAGATGCAGTTCTATGCC
AGAGCTAAACTTTTCTACCAAGAAGTACCAGCCACAGAAGAGGGTATGATGGGAAATTTCATTGAACTGT
CCAGCCCAGACATCCAGGCCTCTCAGAAATTTCTTAGGAAATTTGTTGGGGGGCCTGGGAGAGCTGGAAC
AGACTGCGCCTTGGACTGCGGCTCCGGGATAGGAAGGGTCAGCAAACACGTCTTATTGCCTGTTTTCAAC
AGTGTGGAGCTGGTGGATATGATGGAATCCTTTCTCCTTGAAGCCCAGAACTACCTGCAGGTCAAAGGTG
ACAAAGTAGAAAGCTACCACTGCTACAGCCTGCAGGAATTCACACCCCCCTTCAGGAGATATGATGTCAT
CTGGATTCAGTGGGTCTCTGGGCACCTGACTGATAAGGACCTTCTTGCATTTCTTTCCCGGTGCCGAGAT
GGCCTGAAAGAAAATGGCATCATCATATTGAAGGACAATGTGGCCCGGGAGGGCTGTATCCTTGATCTCT
CTGACAGCAGTGTGACTCGGGACATGGACATCCTCCGGAGCCTAATAAGGAAGAGTGGGCTGGTGGTGCT
GGGCCAGGAGAAGCAGGATGGCTTCCCAGAGCAGTGCATCCCCGTGTGGATGTTCGCACTGCACAGCGAC
AGACACTCCTGA

Translation (283 aa):
MAHRGAHFAFRSRWQKTDDELCRHSMSFILHKAIRNDFFQSYLYLLEKIPLVKLYALTSQVINGEMQFYA
RAKLFYQEVPATEEGMMGNFIELSSPDIQASQKFLRKFVGGPGRAGTDCALDCGSGIGRVSKHVLLPVFN
SVELVDMMESFLLEAQNYLQVKGDKVESYHCYSLQEFTPPFRRYDVIWIQWVSGHLTDKDLLAFLSRCRD
GLKENGIIILKDNVAREGCILDLSDSSVTRDMDILRSLIRKSGLVVLGQEKQDGFPEQCIPVWMFALHSD
RHS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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