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Report for CCDS79530.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
79530.1 Public Mus musculus 17 Zfp799 23 108 98 CCDS HistoryNCBI Gene:240064Re-query CCDS DB by CCDS ID:79530.1Re-query CCDS DB by GeneID:240064See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 19, NCBI annotation release 105, Ensembl annotation release 81

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 79530.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000202988.3 ENSMUSP00000144480.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000202988.3Link to Ensembl Protein Viewer:ENSMUSP00000144480.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000202988Re-query CCDS DB by Protein ID:ENSMUSP00000144480
Original member Current member NCBI NM_177359.5 NP_796333.3 Accepted alive Link to Nucleotide Sequence:NM_177359.5Link to Protein Sequence:NP_796333.3Re-query CCDS DB by Nucleotide ID:NM_177359Re-query CCDS DB by Protein ID:NP_796333Link to BLAST:NP_796333.3

Chromosomal Locations for CCDS 79530.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 17 (NC_000083.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 32819344 32821099 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 32821778 32821838 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 32822074 32822200 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 32830089 32830091 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1947 nt):
ATGGAGTCAGTGACCTTGGAGGATGTGGCTGTGAACTTCACCTTGGAAGAGTGGACTATGCTGAATGCAT
CCCAAAAGGAGCTCTACAAAGATGTGATGCAGGACACCTTGAGGAACCTGTCCTATATAGGAAACAAATG
GGAACACCAAAATATTGAAAATGAGTATGAAACTCTCTGGAGAAAACTAAGTAGTCAGTTGTTGGAGAGA
CTCTGTGAATATACCGAAGGTCATCAGCGTGCAGAAATCTTTAACTGGACCCCAGAGTGTGCTGTGAGCC
AGAAGTCATGTCCAGTTCCCCCATATGAAAGCCCTGTCTATGAAGAAGTAGTTATTGGCCATTTATCTGT
GAATGTCTCCCCTCATCCTCACCCAGGACACAAACTGTATGCCATTCAGGAATATGGAAAAGAATTGTAT
AAACACAAAGAATCTGGGAACACCTCCATTTCTTCCACACCTTTTCAGAAGCAAAAAACAATTCGCACTG
AGGAGAAACCTGAAACTAGTCACTGTAAGGAAGATTCCAGGTGTCTCCCATCCAGTCAGAACGATGGAAA
GAGCTCCAGTGGAGAACCGCACTATGAATGTAAGCAGTGTGGGAAAGCATTCACTTCTTCTAGCTCTTTT
CGTAGGCATGAAGAATATCACAGCCGAGAAAAATCCTATGTGTGTAAGCAGTGTGGGAAAGCCTTCCCCT
TTCCTAGCTCCCTCCAAATACATGAAAGAATCCACACTGGTGAGAAGCCCTATATGTGTAAGCAGTGTGG
GAAGACCTTTGCCCGTTCGAGCTCCCTGCTGACGCATGAGAGGATTCACACTGGAGAAAAGCCCTACGTG
TGTAAGCAGTGTGGGAAGGCCTTCACCGATCGTAGTTCACTTCGATTCCATGAAATGATGCACAGTGGCG
AGAAACCGTATAAGTGTACGAAATGCAGTAAGGCGTTTGCTTCCTCGGGCGCCTTTCGAAAACATGAACG
AACTCACACAGGAGAGCAACTCTTCGTGTGTTTGCAATGTGAGAAGGTTTTTAGCTGTGAAAGCGCTTTT
CGAACACATAAAATAATTCATTCTGGAGAATGTGTCTGTAAGCAATGTGGTAAAGCCTTCACTAGTCACA
GCTCCGTTAAGTACCATGAATTGATGCATAGTGGAGAGAAACCCTATGTATGCAAGCAGTGTGGGAAAAC
CTTTAGGTCTCCAAAACAAGTTCAGATTCATAAGCGAACTCACACTGGAGAAAAACCTTACGTCTGTAAG
GAATGCGGGAAAGCTTTTACCTTTCTCGGTTCCCTTCAATACCACGAGTTGATTCATACCGGGGAGAAAC
CCTATCTATGTAAACAATGTGGGAAAGCCTTCAGGTCTTCTCGTCAAGTTCAGATACACGAACGAACTCA
CACTGGAGAGAAACCATATGTATGTAAGCAGTGTGGCAAAGCCTTCTTTTCTTTGTATCATTTAAGAAGA
CATGAAGTAATTCACAGTGGCTCGAACCCCTACGTTTGTAAGCAATGTGGGAAAGCCTTTAGTTGGTTTA
GTACCTTTCACAGTCATAAACAGACTCACACTGGTGAAAAACCCTATTTATGCAAGCAATGCGGAAAAGC
CTTCTGTAGTCGCATATCATGGAGAAGACATGAGAAGGCTCACACCACAGTGAAGCCCTATGCGTGTGTG
CAATGTGGAAAAGCCTTTCGTTCTCCTAGTTATCTCAAAATACATGAAAGGATCCACACTGGGGAGAAAC
CCTTTATATGTTCTCAGTGTGGGAAACCCTTCCGTTCTTTCCGATATGTCAAGTCACATGAAAGAAGCCA
CACTGGAGAGAAACCCTTTGTGTGTTCAGAATGTGGGAAAGCCTTCAGTTATTATAGCTCTTTCCATAGA
CATAGAAGAACTCACCAGGCAGTAACCTTGAACGCAGAACTAGAAGAGACGTCGTAA

Translation (648 aa):
MESVTLEDVAVNFTLEEWTMLNASQKELYKDVMQDTLRNLSYIGNKWEHQNIENEYETLWRKLSSQLLER
LCEYTEGHQRAEIFNWTPECAVSQKSCPVPPYESPVYEEVVIGHLSVNVSPHPHPGHKLYAIQEYGKELY
KHKESGNTSISSTPFQKQKTIRTEEKPETSHCKEDSRCLPSSQNDGKSSSGEPHYECKQCGKAFTSSSSF
RRHEEYHSREKSYVCKQCGKAFPFPSSLQIHERIHTGEKPYMCKQCGKTFARSSSLLTHERIHTGEKPYV
CKQCGKAFTDRSSLRFHEMMHSGEKPYKCTKCSKAFASSGAFRKHERTHTGEQLFVCLQCEKVFSCESAF
RTHKIIHSGECVCKQCGKAFTSHSSVKYHELMHSGEKPYVCKQCGKTFRSPKQVQIHKRTHTGEKPYVCK
ECGKAFTFLGSLQYHELIHTGEKPYLCKQCGKAFRSSRQVQIHERTHTGEKPYVCKQCGKAFFSLYHLRR
HEVIHSGSNPYVCKQCGKAFSWFSTFHSHKQTHTGEKPYLCKQCGKAFCSRISWRRHEKAHTTVKPYACV
QCGKAFRSPSYLKIHERIHTGEKPFICSQCGKPFRSFRYVKSHERSHTGEKPFVCSECGKAFSYYSSFHR
HRRTHQAVTLNAELEETS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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