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Report for CCDS12660.2 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
12660.2 Public Homo sapiens 19 KLC3 24 110 108 CCDS HistoryNCBI Gene:147700Re-query CCDS DB by CCDS ID:12660.2See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq, Havana and CCDS collaboration)

Sequence IDs included in CCDS 12660.2

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000391946.7 ENSP00000375810.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000391946.7Link to Ensembl Protein Viewer:ENSP00000375810.2Re-query CCDS DB by Nucleotide ID:ENST00000391946Re-query CCDS DB by Protein ID:ENSP00000375810
Original member Current member NCBI NM_177417.3 NP_803136.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_177417.3Link to Protein Sequence:NP_803136.2Re-query CCDS DB by Nucleotide ID:NM_177417Re-query CCDS DB by Protein ID:NP_803136Link to BLAST:NP_803136.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_803136.2 504 Q6P597-1 504 100% 0 0

Chromosomal Locations for CCDS 12660.2

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 45345542 45345799 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 45346544 45346774 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 45347447 45347516 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 45347941 45348160 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 45348646 45348733 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 45348820 45348921 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 45349429 45349602 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 45350341 45350431 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 45350514 45350551 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 45350641 45350747 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 45350954 45351017 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 45351286 45351357 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1515 nt):
ATGTCTGTGCAGGTAGCGGCTCCTGGAAGTGCAGGGCTGGGCCCAGAGCGCCTGAGCCCTGAGGAGCTGG
TGCGGCAGACGCGGCAAGTGGTCCAGGGGCTGGAGGCGCTGCGGGCAGAGCACCATGGCCTGGCTGGGCA
CCTGGCGGAGGCCCTGGCGGGACAGGGCCCGGCAGCCGGCTTGGAGATGCTGGAGGAAAAGCAGCAGGTG
GTGAGCCACTCGCTGGAGGCCATCGAGCTGGGGCTGGGCGAGGCCCAGGTGCTGCTGGCCCTGTCGGCAC
ATGTGGGTGCACTGGAGGCAGAGAAGCAGCGGCTGCGCTCGCAGGCCCGGCGGCTGGCCCAGGAGAACGT
GTGGCTGCGGGAGGAACTGGAGGAGACGCAGCGGCGGCTTCGGGCCAGCGAGGAGTCCGTGGCCCAGCTG
GAGGAGGAGAAGCGCCACCTGGAGTTCCTGGGGCAGCTGCGACAGTACGACCCACCGGCGGAGAGCCAGC
AGTCTGAGTCCCCGCCTCGCCGAGACAGCCTGGCCTCCCTGTTCCCCAGCGAGGAGGAGGAGAGGAAAGG
TCCTGAGGCCGCAGGAGCAGCAGCTGCTCAGCAGGGTGGCTATGAGATCCCTGCCCGCCTTCGGACCCTG
CATAACCTCGTGATCCAGTACGCGGGGCAGGGCCGCTATGAGGTGGCGGTGCCTCTGTGCCGCCAGGCCT
TGGAGGACCTGGAGCGCAGCTCGGGCCACTGCCACCCTGACGTGGCCACCATGCTCAACATCCTGGCGCT
GGTGTACCGGGACCAGAACAAGTACAAAGAAGCCACAGACCTTCTCCATGATGCCCTGCAGATCCGGGAG
CAGACGCTGGGCCCTGAGCACCCCGCGGTGGCCGCCACGCTCAACAACTTGGCTGTCCTCTATGGGAAGC
GTGGGCGTTACCGGGAGGCAGAGCCCCTGTGCCAGCGCGCTTTGGAGATCCGAGAGAAGGTCCTGGGTGC
TGACCACCCAGATGTGGCCAAGCAGCTCAACAACCTGGCCCTGCTGTGCCAGAACCAGGGCAAGTTTGAG
GACGTGGAGCGGCACTATGCCCGGGCCCTGAGCATCTATGAGGCACTGGGCGGGCCCCATGACCCCAACG
TGGCCAAGACCAAGAACAACCTGGCCTCAGCCTACCTGAAACAGAACAAGTATCAACAAGCGGAAGAGCT
GTACAAAGAAATCCTCCACAAGGAGGACCTACCCGCCCCTCTCGGTGCCCCCAACACAGGCACAGCTGGT
GACGCAGAACAGGCCCTTCGCCGCAGCAGCTCACTCTCCAAGATCCGTGAGTCTATCAGGCGAGGAAGTG
AGAAGCTGGTCTCCCGGCTCCGAGGCGAGGCGGCGGCAGGAGCAGCCGGAATGAAGAGAGCCATGTCACT
CAACACACTGAACGTGGATGCTCCAAGGGCTCCTGGGACTCAGTTTCCCAGCTGGCACCTGGACAAGGCC
CCTCGGACCCTCAGCGCCAGCACCCAGGACCTGAGCCCCCACTAA

Translation (504 aa):
MSVQVAAPGSAGLGPERLSPEELVRQTRQVVQGLEALRAEHHGLAGHLAEALAGQGPAAGLEMLEEKQQV
VSHSLEAIELGLGEAQVLLALSAHVGALEAEKQRLRSQARRLAQENVWLREELEETQRRLRASEESVAQL
EEEKRHLEFLGQLRQYDPPAESQQSESPPRRDSLASLFPSEEEERKGPEAAGAAAAQQGGYEIPARLRTL
HNLVIQYAGQGRYEVAVPLCRQALEDLERSSGHCHPDVATMLNILALVYRDQNKYKEATDLLHDALQIRE
QTLGPEHPAVAATLNNLAVLYGKRGRYREAEPLCQRALEIREKVLGADHPDVAKQLNNLALLCQNQGKFE
DVERHYARALSIYEALGGPHDPNVAKTKNNLASAYLKQNKYQQAEELYKEILHKEDLPAPLGAPNTGTAG
DAEQALRRSSSLSKIRESIRRGSEKLVSRLRGEAAAGAAGMKRAMSLNTLNVDAPRAPGTQFPSWHLDKA
PRTLSASTQDLSPH


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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