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Report for CCDS91708.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
91708.1 Public Homo sapiens 12 NACA 24 110 108 CCDS HistoryNCBI Gene:4666Re-query CCDS DB by CCDS ID:91708.1Re-query CCDS DB by GeneID:4666See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108

Review status: Reviewed (by RefSeq and Havana)


Attributes
Inferred exon combination

Sequence IDs included in CCDS 91708.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000454682.6 ENSP00000403817.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000454682.6Link to Ensembl Protein Viewer:ENSP00000403817.1Re-query CCDS DB by Nucleotide ID:ENST00000454682Re-query CCDS DB by Protein ID:ENSP00000403817
Original member Current member NCBI NM_001365896.1 NP_001352825.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001365896.1Link to Protein Sequence:NP_001352825.1Re-query CCDS DB by Nucleotide ID:NM_001365896Re-query CCDS DB by Protein ID:NP_001352825Link to BLAST:NP_001352825.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001352825.1 2078 E9PAV3-1 2078 100% 0 0

Chromosomal Locations for CCDS 91708.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 12 (NC_000012.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 56712538 56712552 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 56712786 56712908 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 56713062 56713190 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 56713537 56713683 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 56714362 56714439 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 56714602 56714687 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 56715871 56721459 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 56724452 56724521 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (6237 nt):
ATGCCCGGCGAAGCCACAGAAACCGTCCCTGCTACAGAGCAGGAGTTGCCGCAGCCCCAGGCTGAGACAG
CTGTGCTACCTATGTCTTCAGCCTTGAGTGTCACTGCTGCCTTAGGGCAGCCTGGACCTACCCTCCCCCC
TCCTTGCTCTCCTGCCCCACAACAGTGCCCTCTCTCAGCTGCTAACCAGGCTTCCCCATTCCCTTCCCCC
TCTACTATTGCCTCGACCCCTTTAGAAGTTCCTTTTCCCCAGTCATCCTCTGGAACAGCCCTACCTTTGG
GAACTGCCCCTGAAGCCCCAACCTTCCTACCAAACCTAATAGGGCCTCCCATCTCCCCAGCTGCCTTAGC
TCTAGCCTCTCCCATGATAGCTCCAACTCTGAAAGGGACCCCTTCCTCTTCAGCTCCCTTAGCTCTGGTT
GCCCTGGCTCCCCACTCAGTTCAGAAGAGTTCTGCTTTTCCACCTAACCTTCTTACTTCACCTCCTTCAG
TGGCTGTAGCTGAGTCAGGGTCAGTGATAACTCTGTCAGCTCCCATTGCTCCCTCAGAACCAAAGACTAA
TCTTAATAAAGTTCCCTCTGAGGTAGTCCCTAATCCAAAAGGCACCCCCAGCCCTCCATGTATAGTCAGT
ACTGTTCCTTACCACTGTGTGACTCCCATGGCCTCTATTCAATCTGGAGTGGCCTCCCTTCCTCAGACAA
CACCCACAACTACCCTAGCCATCGCTTCCCCTCAAGTCAAAGATACCACCATTTCCTCAGTTCTGATTTC
TCCACAAAACCCAGGAAGCCTCAGCCTGAAGGGGCCTGTTAGTCCACCTGCTGCCTTATCTCTTTCAACT
CAGTCTCTTCCTGTGGTGACCTCTTCTCAAAAGACTGCGGGTCCCAACACCCCCCCAGATTTTCCCATTT
CTCTGGGCTCTCATCTTGCACCTTTACATCAGAGTTCTTTTGGTTCTGTCCAACTTTTAGGTCAAACAGG
TCCTAGTGCTTTGTCAGACCCTACAGTGAAGACCATTTCTGTAGATCATTCTTCCACAGGGGCCTCTTAT
CCTTCTCAGAGATCTGTAATTCCTCCCCTTCCTTCCAGAAATGAGGTAGTTCCTGCTACTGTGGCTGCCT
TTCCAGTGGTGGCTCCATCTGTTGACAAAGGTCCCTCTACCATCTCTAGCATAACCTGCAGCCCTTCTGG
CTCCTTAAATGTAGCTACCTCTTTTTCATTATCTCCTACAACCTCTCTCATTCTCAAAAGCTCTCCTAAT
GCCACTTATCATTATCCTTTAGTGGCCCAAATGCCCGTTTCTTCTGTTGGAACCACCCCACTTGTGGTGA
CTAACCCCTGTACAATTGCTGCAGCACCTACTACTACCTTTGAGGTAGCTACTTGTGTTTCTCCTCCAAT
GTCATCAGGTCCCATAAGTAACATAGAACCAACTTCCCCTGCTGCCTTGGTTATGGCACCTGTGGCTCCC
AAAGAGCCTTCTACTCAAGTAGCAACCACTCTGAGGATACCAGTCTCTCCTCCTCTGCCAGACCCTGAAG
ACCTCAAAAATCTCCCCAGTTCAGTATTGGTTAAATTTCCAACACAAAAAGACCTCCAAACTGTACCTGC
CTCTCTTGAAGGAGCCCCTTTCTCTCCAGCCCAAGCAGGACTCACCACCAAGAAAGACCCTACTGTATTA
CCGTTAGTCCAGGCAGCCCCTAAAAATTCCCCTTCTTTCCAAAGTACATCCTCTTCTCCAGAGATACCTC
TTTCTCCTGAAGCCACCCTAGCAAAGAAAAGCCTTGGGGAGCCTCTCCCTATAGGTAAGCCAGCCAGCAG
TATGACCTCCCCTCTGGGTGTTAACTCCTCGGCCTCTGTAATCAAGACAGATTCTTATGCAGGCCCAGAC
TCTGCTGGTCCGCTTCTCAAAAGTTCTCTCATTACCCCAACAGTGGCTGCATTTCCTTTGGAAAGTGCTG
ACCCTGCCGGGGTGGCTCCCACAACTGCCAAAGGTACCTCAACTTATACAACTACAGCCAGCCCTTTTCT
AGAAGGAACTGTCTCTTTAGCTCCTAAAAACCACCCAGTTAAGGAAGGTACTCTTACTACTTTACCCTTG
GTTCCTACAGCTTCAGAAAATTGCCCTGTGGCTCCATCCCCCCAGAATACCTGTGCTCCTCTGGCTACCT
TAGTGCTGGCCCCTGAAATCCCAAAGTCTGTGCCCTCACCCTCTCTTCCCCCAGCTGGGACTCCTCCAGG
TACAAAAAAGGTTGATGGTATTTCTCATACTTCAGCATTGGCACCTGTTGCTTCCTCTCCCAAAGAGTGC
CCAACTGAGGACTCTGGTGCTTCTGCTACTGCATCTTCCAAAGGAACTCTGACTTACCTAGCTGATTCCC
CATCTCCTTTAGGGGTTAGTGTGTCTCCTCAGACTAAAAGACCTCCAACCAAGAAGGGTTCTGCTGGCCC
TGATACTCCTATTGGAAATCTCTCATCCCCTGTTTCTCCAGTTGAAGCTTCATTTCTTCCAGAGAATAGT
CTTTCTTTCCAAGGCTCTAAAGACTCACCAGCCACGACGCATTCTCCCACTCCTCCATCCCCCAAAGGGG
CCCCTACTCCCTCAGCTGTGACTCCTCTGTCTCCCAAAGGAGTAACACTACCCCCCAAAGAGACCCCCAC
TCCTTCAGTGGTGAATCTGCCCTTCCCCAAAGAGGGTCCAGCTACTCCAGCACCCAAACAGGCTCCTGCT
CTATCCATGACTTCTTCCTCCCCCAAAAAGGCCCGAGCAACTCCAGCCCCTAAAGGAATCCCAGCTTCCC
CATCCCCCAAAGGGGCCCCCACACCCCCAGCTGCAACTCCTCCCTCCCCTAAAGGAGGCCCAGCTACCCC
ATCCCCGAAATGGGCCCCCACACCCCCAGCTGCAACTCCTCCCTCCCCAAAAGGAGGTCCAGCTACTCCA
TCCCCCAAAGGGGCCCCCACACCCCCAGCTGCAACTCCTCCCTCCCCCAAAGGAGGTCCAGCTACTCCAT
CCCCCAAAGGGGCCCCCACACCCCCAGCTGTGACTCCTCCCTCCCCCAAAGGAAGTCCAGCAGCTACCCC
ATTCCCCAAAGGGGCATCCACACCCCCAGCTGCAACTCCTCCCTCCCCCAAAGGAAGTCCAGCAGCTACC
CCACTCCCCAAAGGGGCCCCCACAACCCCAGCTGCAACTCTTCCCTCCCCAAAAGGAGGTCCAGCTACCC
CATCCCTCAAGGGGGCCCCCACTCCCCCAGCTGCGACTCCTCCCTCCCCAAAAGGAGGCCCAGCTACCCC
ATCCCCCAAAGGGGCCCCCATGCCCCCAGCTGCAACTCCTCCCTCCCCAAAAGGAGGTCTAGCTACCCCA
CCCCACAAAGGGGCACCCACAACCCCAGCTGCAACTCCTCCCTCCCCAAAAGGAGGTCTAGCTACCCCAC
CCCCAAAAGGGGCCCCCACAACCCCAGCTGCAACTCCTCCTTCCCCAAAAGGAGGTCTAGCTACCCCACC
CCCAAAAGGGGCCCCCACAACCCCAGCTGCAACTCCTCCTTCCCCAAAAGGAGGTCTAGCTACCCCATCC
CCCAAAGGGGCCCCCACAACCCCAGCTGCAACTCCTCCCTCCCCAAAAGGAGGTCTAGCTACCCCATCCC
CCAAAGGGGCCCCCACAACCCCAGCTGCAACTCCTCCCTCCCCAAAAGGAGGTCTGGCTACCCCATCCCC
CAAAGGGGCCCCCACAACCCCAGCTGCAACTCCTCCCTCCCCAAAAGGAGGCCCAGCTACCCCACCCCCC
AAAGGGGCCCCCACTCCCCCAGCTGCAACTCCTCCCTCCCTAAAAGGAGGTCTAGCTACCCCACCCCACA
AAGGGGCCCCCAATCCCGCAGTTGTAACTCCTCCCTCTCCAAAAGGAGGCCCAGCTACCTCACCCCCCAA
AGGGGCCCCCACTCCTCCAGCTGCAACTCCTCCCTCCCCAAAAGGAAGCCCAGGTACCCCACCCCCCAAA
GGGGCCCCCACTCCCCCAGCTGTAACTCCTCCCTCCCCTAAAGGGACCCCTACTCTCCCAGCTACAACTC
CCTCCTCTAAAGGAGGCCCAACTACTCCATCCTCCAAAGAGGGCCCCACTCCCCCAGCTGCAACCCCCTC
CCACAAAGGAGGTCCCGCTATGACTCCTCCCTCCCCCAAAAGAGGACCAGCTATCCCATCTCCCAAAGGG
GACCCCACTTCCCCAGCAGTGATTCCTCTCTCCCCCAAAAAGGCTCCAGCAACTCCAGTCACCAGAGAAG
GCGCAGCCACCCCATCCAAAGGAGATCTCACTCCCCCAGCAGTGACTCCTGTCTCCCTCAAAAAGGCCCC
AGCAACTTCAGCCCCCAAAGGAGGCCCAGCTACCCCATCCTCCAAAGGGGATCCCACCCTCCCAGCAGTG
ACTCCTCCTTCCCCCAAGGAGCCCCCAGCCCCCAAACAAGTTGCCACTTCTTCCTCTCCCAAAAAGGCCC
CAGCAACTCCAGCCCCCATGGGGGCCCCCACTCTGCCAGCTGTGATTCCTTCTTCCCCCAAAGAGGTCCC
AGCTACCCCATCCTCCAGAAGGGACCCCATTGCCCCAACAGCGACTCTTCTCTCTAAAAAGACCCCAGCA
ACTCTAGCCCCCAAAGAGGCCCTCATTCCCCCAGCTATGACTGTTCCCTCCCCTAAAAAGACCCCAGCAA
TTCCAACCCCCAAAGAAGCCCCAGCTACCCCATCCTCCAAAGAGGCCTCCAGTCCCCCAGCAGTGACTCC
TTCCACTTACAAAGGGGCCCCATCCCCCAAAGAGCTCCTCATTCCACCAGCTGTGACTTCTCCTTCCCCC
AAAGAGGCACCTACTCCTCCAGCTGTGACTCCTCCATCCCCCGAAAAGGGCCCAGCAACTCCAGCCCCCA
AAGGGACTCCCACTTCCCCACCTGTGACTCCTTCCTCCCTCAAAGACTCCCCTACTTCCCCAGCTTCTGT
CACATGTAAAATGGGGGCCACTGTTCCTCAAGCATCTAAAGGGCTTCCAGCAAAGAAAGGCCCCACAGCT
CTGAAAGAAGTACTTGTTGCCCCAGCTCCAGAAAGCACGCCAATCATCACAGCTCCCACTCGGAAAGGTC
CACAGACCAAAAAGAGTTCTGCTACTTCACCTCCTATATGCCCAGATCCCTCAGCTAAGAATGGTTCTAA
AGGACCCCTTTCCACAGTGGCTCCAGCCCCTCTACTCCCTGTTCAGAAAGACTCTTCAAAGACAGCAAAA
GGCAAAGATGCTTCTCATTCCCCAAAGGGCCCCTTGGCTCCTCCTGAGTCTAAGGCGTCCACCCCTCTAA
CAGCAGCTGCCTTTGAGAAGGTCCTTCCTAAACCTGAATCAGCATCTGTCTCTGCAGCACCCTCCCCACC
AGTCTCTCTGCCTCTTGCTCCCTCCCCAGTTCCCACTCTGCCTCCTAAACAGCAATTTCTGCCGTCCTCT
CCTGGGCTGGTGTTGGAATCACCCTCTAAACCCCTTGCCCCTGCTGATGAGGATGAGCTGCTGCCTCTGA
TTCCCCCGGAACCAATCTCTGGGGGAGTGCCTTTCCAGTCGGTCCTCGTCAACATGCCCACCCCTAAATC
TGCTGGAATCCCTGTCCCAACCCCCTCTGCCAAGCAACCTGTTACGAAGAACAACAAGGGGTCTGGAACA
GAATCTGACAGTGATGAATCAGTACCAGAGCTTGAAGAACAGGATTCCACCCAGGCAACCACACAACAAG
CCCAGCTGGCGGCAGCAGCTGAAATTGATGAAGAACCAGTCAGTAAAGCAAAACAGAGTCGGAGTGAAAA
GAAGGCACGGAAGGCTATGTCCAAACTGGGTCTTCGGCAGGTTACAGGAGTTACTAGAGTCACTATCCGG
AAATCTAAGAATATCCTCTTTGTCATCACAAAACCAGATGTCTACAAGAGCCCTGCTTCAGATACTTACA
TAGTTTTTGGGGAAGCCAAGATCGAAGATTTATCCCAGCAAGCACAACTAGCAGCTGCTGAGAAATTCAA
AGTTCAAGGTGAAGCTGTCTCAAACATTCAAGAAAACACACAGACTCCAACTGTACAAGAGGAGAGTGAA
GAGGAAGAGGTCGATGAAACAGGTGTAGAAGTTAAGGACATTGAATTGGTCATGTCACAAGCAAATGTGT
CGAGAGCAAAGGCAGTCCGAGCCCTGAAGAACAACAGTAATGATATTGTAAATGCGATTATGGAATTAAC
AATGTAA

Translation (2078 aa):
MPGEATETVPATEQELPQPQAETAVLPMSSALSVTAALGQPGPTLPPPCSPAPQQCPLSAANQASPFPSP
STIASTPLEVPFPQSSSGTALPLGTAPEAPTFLPNLIGPPISPAALALASPMIAPTLKGTPSSSAPLALV
ALAPHSVQKSSAFPPNLLTSPPSVAVAESGSVITLSAPIAPSEPKTNLNKVPSEVVPNPKGTPSPPCIVS
TVPYHCVTPMASIQSGVASLPQTTPTTTLAIASPQVKDTTISSVLISPQNPGSLSLKGPVSPPAALSLST
QSLPVVTSSQKTAGPNTPPDFPISLGSHLAPLHQSSFGSVQLLGQTGPSALSDPTVKTISVDHSSTGASY
PSQRSVIPPLPSRNEVVPATVAAFPVVAPSVDKGPSTISSITCSPSGSLNVATSFSLSPTTSLILKSSPN
ATYHYPLVAQMPVSSVGTTPLVVTNPCTIAAAPTTTFEVATCVSPPMSSGPISNIEPTSPAALVMAPVAP
KEPSTQVATTLRIPVSPPLPDPEDLKNLPSSVLVKFPTQKDLQTVPASLEGAPFSPAQAGLTTKKDPTVL
PLVQAAPKNSPSFQSTSSSPEIPLSPEATLAKKSLGEPLPIGKPASSMTSPLGVNSSASVIKTDSYAGPD
SAGPLLKSSLITPTVAAFPLESADPAGVAPTTAKGTSTYTTTASPFLEGTVSLAPKNHPVKEGTLTTLPL
VPTASENCPVAPSPQNTCAPLATLVLAPEIPKSVPSPSLPPAGTPPGTKKVDGISHTSALAPVASSPKEC
PTEDSGASATASSKGTLTYLADSPSPLGVSVSPQTKRPPTKKGSAGPDTPIGNLSSPVSPVEASFLPENS
LSFQGSKDSPATTHSPTPPSPKGAPTPSAVTPLSPKGVTLPPKETPTPSVVNLPFPKEGPATPAPKQAPA
LSMTSSSPKKARATPAPKGIPASPSPKGAPTPPAATPPSPKGGPATPSPKWAPTPPAATPPSPKGGPATP
SPKGAPTPPAATPPSPKGGPATPSPKGAPTPPAVTPPSPKGSPAATPFPKGASTPPAATPPSPKGSPAAT
PLPKGAPTTPAATLPSPKGGPATPSLKGAPTPPAATPPSPKGGPATPSPKGAPMPPAATPPSPKGGLATP
PHKGAPTTPAATPPSPKGGLATPPPKGAPTTPAATPPSPKGGLATPPPKGAPTTPAATPPSPKGGLATPS
PKGAPTTPAATPPSPKGGLATPSPKGAPTTPAATPPSPKGGLATPSPKGAPTTPAATPPSPKGGPATPPP
KGAPTPPAATPPSLKGGLATPPHKGAPNPAVVTPPSPKGGPATSPPKGAPTPPAATPPSPKGSPGTPPPK
GAPTPPAVTPPSPKGTPTLPATTPSSKGGPTTPSSKEGPTPPAATPSHKGGPAMTPPSPKRGPAIPSPKG
DPTSPAVIPLSPKKAPATPVTREGAATPSKGDLTPPAVTPVSLKKAPATSAPKGGPATPSSKGDPTLPAV
TPPSPKEPPAPKQVATSSSPKKAPATPAPMGAPTLPAVIPSSPKEVPATPSSRRDPIAPTATLLSKKTPA
TLAPKEALIPPAMTVPSPKKTPAIPTPKEAPATPSSKEASSPPAVTPSTYKGAPSPKELLIPPAVTSPSP
KEAPTPPAVTPPSPEKGPATPAPKGTPTSPPVTPSSLKDSPTSPASVTCKMGATVPQASKGLPAKKGPTA
LKEVLVAPAPESTPIITAPTRKGPQTKKSSATSPPICPDPSAKNGSKGPLSTVAPAPLLPVQKDSSKTAK
GKDASHSPKGPLAPPESKASTPLTAAAFEKVLPKPESASVSAAPSPPVSLPLAPSPVPTLPPKQQFLPSS
PGLVLESPSKPLAPADEDELLPLIPPEPISGGVPFQSVLVNMPTPKSAGIPVPTPSAKQPVTKNNKGSGT
ESDSDESVPELEEQDSTQATTQQAQLAAAAEIDEEPVSKAKQSRSEKKARKAMSKLGLRQVTGVTRVTIR
KSKNILFVITKPDVYKSPASDTYIVFGEAKIEDLSQQAQLAAAEKFKVQGEAVSNIQENTQTPTVQEESE
EEEVDETGVEVKDIELVMSQANVSRAKAVRALKNNSNDIVNAIMELTM


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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