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Report for CCDS36581.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
36581.1 Public Mus musculus 13 Gdi2 23 108 98 CCDS HistoryNCBI Gene:14569Re-query CCDS DB by CCDS ID:36581.1See the combined annotation on chromosome 13 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 36581.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000223396.1 ENSMUSP00000152454.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000223396.1Link to Ensembl Protein Viewer:ENSMUSP00000152454.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000223396Re-query CCDS DB by Protein ID:ENSMUSP00000152454
Original member Current member NCBI NM_008112.4 NP_032138.3 Accepted alive Link to Nucleotide Sequence:NM_008112.4Link to Protein Sequence:NP_032138.3Re-query CCDS DB by Nucleotide ID:NM_008112Re-query CCDS DB by Protein ID:NP_032138Link to BLAST:NP_032138.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_032138.3 445 Q61598-1 445 100% 0 0

Chromosomal Locations for CCDS 36581.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 13 (NC_000079.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13See the combined annotation on chromosome 13 in Sequence Viewer

Chromosome Start Stop Links
13 3538299 3538343 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 3548863 3548970 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 3550989 3551088 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 3554412 3554546 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 3556314 3556512 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 3556926 3557057 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 3559992 3560091 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 3561866 3562037 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 3564540 3564684 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 3564859 3564913 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 3564996 3565142 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1338 nt):
ATGAATGAGGAATACGACGTGATCGTGCTGGGCACCGGCCTGACGGAATGTATCCTGTCGGGGATAATGT
CAGTGAATGGGAAGAAGGTTCTTCATATGGATCAGAACCCATACTATGGAGGAGAAAGTGCGTCTATAAC
ACCGCTGGAAGATTTATACAAAAGGTTTAAATTACCAGGACAACCGCCAGCATCAATGGGAAGAGGAAGA
GACTGGAATGTTGACTTAATTCCCAAGTTCCTTATGGCCAATGGTCAGTTGGTGAAGATGCTGCTTTTCA
CAGAGGTCACTCGTTACATGGACTTCAAAGTGATTGAGGGAAGCTTTGTCTACAAGGGAGGGAAAATCTA
CAAGGTTCCTTCCACTGAAGCAGAAGCCCTGGCATCTAGCTTAATGGGACTGTTTGAGAAACGCCGTTTC
AGGAAGTTCCTGGTTTATGTTGCCAACTTTGATGAAAAAGATCCTAGAACTTTCGAGGGTGTTGATCCTA
AGAAGACCTCCATGAGAGATGTGTATAAGAAGTTTGATTTGGGCCAAGATGTTATAGACTTTACTGGCCA
TTCTCTTGCACTGTACAGAACAGATGACTACTTAGATCAGCCGTGTTGTGAAACCATTAATAGAATTAAA
CTTTACAGCGAGTCTTTGGCAAGATACGGTAAAAGCCCGTACCTGTATCCGCTTTATGGTCTTGGAGAAT
TGCCGCAAGGATTTGCAAGGTTAAGTGCCATATATGGAGGTACCTACATGTTGAATAAACCAATTGAAGA
AATCATTGTGCAAAATGGAAAAGTGGTTGGTGTAAAATCCGAAGGAGAGATTGCTCGCTGTAAACAGCTC
ATCTGTGATCCCAGCTATGTAAAAGATCGGGTTGAAAAAGTGGGCCAGGTAATCAGAGTGATCTGTATCC
TTAGCCACCCTATCAAGAACACCAACGATGCCAACTCCTGCCAGATCATCATTCCACAGAACCAAGTCAA
CCGCAAGTCAGATATCTATGTTTGCATGATCTCCTTTGCACATAATGTGGCAGCACAGGGCAAGTATATT
GCCATTGTAAGTACAACCGTGGAGACCAAGGAACCAGAGAAAGAAATCAGACCGGCTTTGGAGCTCTTGG
AACCAATTGAACAGAAATTTGTCAGCATCAGTGACCTCTTTGTACCTAAAGATTTGGGAACAGATAGTCA
GATCTTCATTTCCCGTGCCTATGATGCTACCACGCACTTTGAGACAACCTGTGATGACATTAAAGATATC
TACAAGAGGATGACAGGATCTGAGTTTGACTTTGAGGAAATGAAGCGCAAGAAGAATGACATTTATGGAG
AAGACTAA

Translation (445 aa):
MNEEYDVIVLGTGLTECILSGIMSVNGKKVLHMDQNPYYGGESASITPLEDLYKRFKLPGQPPASMGRGR
DWNVDLIPKFLMANGQLVKMLLFTEVTRYMDFKVIEGSFVYKGGKIYKVPSTEAEALASSLMGLFEKRRF
RKFLVYVANFDEKDPRTFEGVDPKKTSMRDVYKKFDLGQDVIDFTGHSLALYRTDDYLDQPCCETINRIK
LYSESLARYGKSPYLYPLYGLGELPQGFARLSAIYGGTYMLNKPIEEIIVQNGKVVGVKSEGEIARCKQL
ICDPSYVKDRVEKVGQVIRVICILSHPIKNTNDANSCQIIIPQNQVNRKSDIYVCMISFAHNVAAQGKYI
AIVSTTVETKEPEKEIRPALELLEPIEQKFVSISDLFVPKDLGTDSQIFISRAYDATTHFETTCDDIKDI
YKRMTGSEFDFEEMKRKKNDIYGED


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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