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Report for CCDS10269.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
10269.1 Public Homo sapiens 15 CSK 24 110 108 CCDS HistoryNCBI Gene:1445Re-query CCDS DB by CCDS ID:10269.1See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 10269.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000220003.14 ENSP00000220003.9 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000220003.14Link to Ensembl Protein Viewer:ENSP00000220003.9Re-query CCDS DB by Nucleotide ID:ENST00000220003Re-query CCDS DB by Protein ID:ENSP00000220003
Original member Current member EBI ENST00000439220.6 ENSP00000414764.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000439220.6Link to Ensembl Protein Viewer:ENSP00000414764.2Re-query CCDS DB by Nucleotide ID:ENST00000439220Re-query CCDS DB by Protein ID:ENSP00000414764
Original member Current member EBI ENST00000567571.5 ENSP00000454906.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000567571.5Link to Ensembl Protein Viewer:ENSP00000454906.1Re-query CCDS DB by Nucleotide ID:ENST00000567571Re-query CCDS DB by Protein ID:ENSP00000454906
Original member Current member NCBI NM_001127190.2 NP_001120662.1 Accepted alive Link to Nucleotide Sequence:NM_001127190.2Link to Protein Sequence:NP_001120662.1Re-query CCDS DB by Nucleotide ID:NM_001127190Re-query CCDS DB by Protein ID:NP_001120662Link to BLAST:NP_001120662.1
Original member Current member NCBI NM_001354988.2 NP_001341917.1 Accepted alive Link to Nucleotide Sequence:NM_001354988.2Link to Protein Sequence:NP_001341917.1Re-query CCDS DB by Nucleotide ID:NM_001354988Re-query CCDS DB by Protein ID:NP_001341917Link to BLAST:NP_001341917.1
Original member Current member NCBI NM_001387089.1 NP_001374018.1 Accepted alive Link to Nucleotide Sequence:NM_001387089.1Link to Protein Sequence:NP_001374018.1Re-query CCDS DB by Nucleotide ID:NM_001387089Re-query CCDS DB by Protein ID:NP_001374018Link to BLAST:NP_001374018.1
Original member Current member NCBI NM_001387090.1 NP_001374019.1 Accepted alive Link to Nucleotide Sequence:NM_001387090.1Link to Protein Sequence:NP_001374019.1Re-query CCDS DB by Nucleotide ID:NM_001387090Re-query CCDS DB by Protein ID:NP_001374019Link to BLAST:NP_001374019.1
Original member Current member NCBI NM_001387091.1 NP_001374020.1 Accepted alive Link to Nucleotide Sequence:NM_001387091.1Link to Protein Sequence:NP_001374020.1Re-query CCDS DB by Nucleotide ID:NM_001387091Re-query CCDS DB by Protein ID:NP_001374020Link to BLAST:NP_001374020.1
Original member Current member NCBI NM_001387092.1 NP_001374021.1 Accepted alive Link to Nucleotide Sequence:NM_001387092.1Link to Protein Sequence:NP_001374021.1Re-query CCDS DB by Nucleotide ID:NM_001387092Re-query CCDS DB by Protein ID:NP_001374021Link to BLAST:NP_001374021.1
Original member Current member NCBI NM_001387093.1 NP_001374022.1 Accepted alive Link to Nucleotide Sequence:NM_001387093.1Link to Protein Sequence:NP_001374022.1Re-query CCDS DB by Nucleotide ID:NM_001387093Re-query CCDS DB by Protein ID:NP_001374022Link to BLAST:NP_001374022.1
Original member Current member NCBI NM_004383.3 NP_004374.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_004383.3Link to Protein Sequence:NP_004374.1Re-query CCDS DB by Nucleotide ID:NM_004383Re-query CCDS DB by Protein ID:NP_004374Link to BLAST:NP_004374.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001120662.1 450 P41240 450 100% 0 0
NP_001341917.1 450 P41240 450 100% 0 0
NP_001374018.1 450 P41240 450 100% 0 0
NP_001374019.1 450 P41240 450 100% 0 0
NP_001374020.1 450 P41240 450 100% 0 0
NP_001374021.1 450 P41240 450 100% 0 0
NP_001374022.1 450 P41240 450 100% 0 0
NP_004374.1 450 P41240 450 100% 0 0

Chromosomal Locations for CCDS 10269.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 15 (NC_000015.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 74798298 74798312 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 74798615 74798728 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 74798826 74798938 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 74799272 74799491 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 74800412 74800505 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 74800681 74800746 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 74800823 74800922 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 74801012 74801102 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 74801522 74801595 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 74801695 74801890 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 74801997 74802083 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 74802331 74802513 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1353 nt):
ATGTCAGCAATACAGGCCGCCTGGCCATCCGGTACAGAATGTATTGCCAAGTACAACTTCCACGGCACTG
CCGAGCAGGACCTGCCCTTCTGCAAAGGAGACGTGCTCACCATTGTGGCCGTCACCAAGGACCCCAACTG
GTACAAAGCCAAAAACAAGGTGGGCCGTGAGGGCATCATCCCAGCCAACTACGTCCAGAAGCGGGAGGGC
GTGAAGGCGGGTACCAAACTCAGCCTCATGCCTTGGTTCCACGGCAAGATCACACGGGAGCAGGCTGAGC
GGCTTCTGTACCCGCCGGAGACAGGCCTGTTCCTGGTGCGGGAGAGCACCAACTACCCCGGAGACTACAC
GCTGTGCGTGAGCTGCGACGGCAAGGTGGAGCACTACCGCATCATGTACCATGCCAGCAAGCTCAGCATC
GACGAGGAGGTGTACTTTGAGAACCTCATGCAGCTGGTGGAGCACTACACCTCAGACGCAGATGGACTCT
GTACGCGCCTCATTAAACCAAAGGTCATGGAGGGCACAGTGGCGGCCCAGGATGAGTTCTACCGCAGCGG
CTGGGCCCTGAACATGAAGGAGCTGAAGCTGCTGCAGACCATCGGGAAGGGGGAGTTCGGAGACGTGATG
CTGGGCGATTACCGAGGGAACAAAGTCGCCGTCAAGTGCATTAAGAACGACGCCACTGCCCAGGCCTTCC
TGGCTGAAGCCTCAGTCATGACGCAACTGCGGCATAGCAACCTGGTGCAGCTCCTGGGCGTGATCGTGGA
GGAGAAGGGCGGGCTCTACATCGTCACTGAGTACATGGCCAAGGGGAGCCTTGTGGACTACCTGCGGTCT
AGGGGTCGGTCAGTGCTGGGCGGAGACTGTCTCCTCAAGTTCTCGCTAGATGTCTGCGAGGCCATGGAAT
ACCTGGAGGGCAACAATTTCGTGCATCGAGACCTGGCTGCCCGCAATGTGCTGGTGTCTGAGGACAACGT
GGCCAAGGTCAGCGACTTTGGTCTCACCAAGGAGGCGTCCAGCACCCAGGACACGGGCAAGCTGCCAGTC
AAGTGGACAGCCCCTGAGGCCCTGAGAGAGAAGAAATTCTCCACTAAGTCTGACGTGTGGAGTTTCGGAA
TCCTTCTCTGGGAAATCTACTCCTTTGGGCGAGTGCCTTATCCAAGAATTCCCCTGAAGGACGTCGTCCC
TCGGGTGGAGAAGGGCTACAAGATGGATGCCCCCGACGGCTGCCCGCCCGCAGTCTATGAAGTCATGAAG
AACTGCTGGCACCTGGACGCCGCCATGCGGCCCTCCTTCCTACAGCTCCGAGAGCAGCTTGAGCACATCA
AAACCCACGAGCTGCACCTGTGA

Translation (450 aa):
MSAIQAAWPSGTECIAKYNFHGTAEQDLPFCKGDVLTIVAVTKDPNWYKAKNKVGREGIIPANYVQKREG
VKAGTKLSLMPWFHGKITREQAERLLYPPETGLFLVRESTNYPGDYTLCVSCDGKVEHYRIMYHASKLSI
DEEVYFENLMQLVEHYTSDADGLCTRLIKPKVMEGTVAAQDEFYRSGWALNMKELKLLQTIGKGEFGDVM
LGDYRGNKVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRS
RGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPV
KWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDAPDGCPPAVYEVMK
NCWHLDAAMRPSFLQLREQLEHIKTHELHL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
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