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Report for CCDS37218.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
37218.1 Public Mus musculus 15 Krt86 23 108 98 CCDS HistoryNCBI Gene:16679Re-query CCDS DB by CCDS ID:37218.1Re-query CCDS DB by GeneID:16679See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 37218.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000088049.4 ENSMUSP00000085365.3 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000088049.4Link to Ensembl Protein Viewer:ENSMUSP00000085365.3Re-query CCDS DB by Nucleotide ID:ENSMUST00000088049Re-query CCDS DB by Protein ID:ENSMUSP00000085365
Original member Current member NCBI NM_010667.2 NP_034797.1 Accepted alive Link to Nucleotide Sequence:NM_010667.2Link to Protein Sequence:NP_034797.1Re-query CCDS DB by Nucleotide ID:NM_010667Re-query CCDS DB by Protein ID:NP_034797Link to BLAST:NP_034797.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_034797.1 486 P97861 486 100% 0 0

Chromosomal Locations for CCDS 37218.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 15 (NC_000081.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 101473551 101473919 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 101474540 101474748 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 101475405 101475465 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 101476201 101476296 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 101476463 101476627 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 101476851 101476976 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 101477252 101477472 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 101479212 101479243 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 101479376 101479557 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1461 nt):
ATGACTTGCGGATCCTACTGTGGTGGCCGTGCCTTCAGCTGCGCCTCAGCCTGTGGGCCCAGGCCCGGCC
GCTGCTGCATCTCTGCAGCTCCCTACAGGGGCATCTCCTGCTACCGAGGACTCTCAGGGGGCTTCGGCAG
CCAGAGTGTCTGTGGGGCCTTCCGCTCTGGCTCCTGTGGACGCAGCTTCGGGTACCGCTCTGGAGGCATC
TGCGGGCCCAGCCCACCCTGCATCACCACAGTCTCTGTCAATGAGAGCCTGCTCACACCCCTGAACCTGG
AGATCGACCCCAATGCTCAGTGTGTGAAGCATGAGGAGAAGGAGCAGATCAAGTGTCTCAACAGCAAGTT
CGCGGCCTTCATCGACAAGGTGCGCTTCCTGGAGCAGCAGAACAAGCTGCTGGAGACCAAGTGGCAGTTC
TACCAGAACCGCAAGTGCTGTGAGAGCAACATGGAGCCTCTGTTCGAGGGCTACATCGAGGCGCTGAGGC
GGGAGGCTGAGTGTGTGGAGGCCGACAGCGGGAGGCTGGCAGCCGAGCTCAACCATGCGCAGGAGTCCAT
GGAGGGCTACAAGAAGAGGTACGAGGAGGAAGTTTCTCTGAGAGCTACAGCTGAGAATGAGTTTGTGGCT
CTGAAGAAGGATGTGGACTGTGCCTACCTGCGCAAGTCAGACCTGGAGGCCAACGCAGAGGCACTGACCC
AGGAGACCGACTTCCTGAGGAGAATGTATGACGAGGAGACCCGCATCCTCCATTCCCACATCTCAGACAC
CTCCATCGTCGTCAAGATGGACAACAGCCGGGACCTGAACATGGACTGTGTCGTGGCTGAGATCAAGGCT
CAGTATGATGACATTGCCAGCCGCAGCCGTGCTGAGGCTGAGTCCTGGTACCGCACCAAGTGTGAGGAGA
TAAAGGCCACAGTGATCCGGCATGGAGAGACTCTGCGCCGCACCAGAGAGGAGATCAATGAGCTGAACAG
AATGATCCAGAGGCTGACTGCTGAGATCGAGAATGCCAAGTGCCAGAACACCAAGCTGGAGGCTGCCGTG
ACCCAATCTGAGCAGCAGGGAGAGGCTGCCCTTGCTGATGCCCGCTGCAAGCTGGCTGAGCTGGAGGGTG
CCCTGCAGAAGGCCAAGCAGGACATGGCCTGCCTGCTCAAGGAGTACCAGGAGGTGATGAACTCCAAGCT
GGGGCTGGACGTTGAGATCACCACCTACAGGCGCCTGCTGGAGGGCGAGGAGCAGAGGTTGTGTGAGGGC
GTTGGCTCCGTGAATGTGTGTGTGAGCAGCTCCCGCGGTGGCGTCGTCTGTGGCGATCTCTGCGTCTCTG
GTACTGCCCCTGCTGTCAACACAAGAGTGTGCAGCGCCCCCTGCAGCGGAAACGTGGTGGTGGGCACCCC
CAATGCCTGCGCCCCCTGCGCCGGGGCAGGCGCCTGCAGCGGAGGCTGTAAGAAGTGCTAG

Translation (486 aa):
MTCGSYCGGRAFSCASACGPRPGRCCISAAPYRGISCYRGLSGGFGSQSVCGAFRSGSCGRSFGYRSGGI
CGPSPPCITTVSVNESLLTPLNLEIDPNAQCVKHEEKEQIKCLNSKFAAFIDKVRFLEQQNKLLETKWQF
YQNRKCCESNMEPLFEGYIEALRREAECVEADSGRLAAELNHAQESMEGYKKRYEEEVSLRATAENEFVA
LKKDVDCAYLRKSDLEANAEALTQETDFLRRMYDEETRILHSHISDTSIVVKMDNSRDLNMDCVVAEIKA
QYDDIASRSRAEAESWYRTKCEEIKATVIRHGETLRRTREEINELNRMIQRLTAEIENAKCQNTKLEAAV
TQSEQQGEAALADARCKLAELEGALQKAKQDMACLLKEYQEVMNSKLGLDVEITTYRRLLEGEEQRLCEG
VGSVNVCVSSSRGGVVCGDLCVSGTAPAVNTRVCSAPCSGNVVVGTPNACAPCAGAGACSGGCKKC


Links Key
 Links to:   History report
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  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
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