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Report for CCDS37163.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
37163.1 Public Mus musculus 15 Cyp2d26 23 108 98 CCDS HistoryNCBI Gene:76279Re-query CCDS DB by CCDS ID:37163.1Re-query CCDS DB by GeneID:76279See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 37163.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000006094.5 ENSMUSP00000006094.4 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000006094.5Link to Ensembl Protein Viewer:ENSMUSP00000006094.4Re-query CCDS DB by Nucleotide ID:ENSMUST00000006094Re-query CCDS DB by Protein ID:ENSMUSP00000006094
Original member Current member NCBI NM_029562.2 NP_083838.1 Accepted alive Link to Nucleotide Sequence:NM_029562.2Link to Protein Sequence:NP_083838.1Re-query CCDS DB by Nucleotide ID:NM_029562Re-query CCDS DB by Protein ID:NP_083838Link to BLAST:NP_083838.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_083838.1 500 Q8CIM7 500 99.8% 0 1

Chromosomal Locations for CCDS 37163.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 15 (NC_000081.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 82790177 82790355 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 82790456 82790597 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 82790970 82791157 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 82791333 82791474 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 82791658 82791834 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 82792469 82792629 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 82792708 82792860 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 82793126 82793297 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 82793985 82794173 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1503 nt):
ATGGGGCTGCTGGTTGGAGATGACTTATGGGCTGTGGTCATATTCACAGCCATCTTCCTGCTTCTGGTGG
ACCTGGTGCACCGGCGCCAGCGCTGGACTGCCTGCTACCCACCAGGCCCTGTGCCATTCCCTGGGCTGGG
AAACCTGCTGCAGGTGGACTTCGAGAACATACCATACAGCTTTTACAAGCTTCAAAACCGCTATGGCAAT
GTGTTCAGCCTACAGATGGCCTGGAAGCCCGTGGTTGTGGTCAACGGACTGAAGGCAGTGCGGGAACTGC
TGGTGACCTATGGAGAGGACACTTCTGACCGCCCCCTAATGCCCATCTATAATCACATAGGCTATGGGCA
CAAATCAAAAGGTGTGATCCTTGCACCTTACGGGCCCGAGTGGCGAGAGCAGCGGCGATTTTCTGTGTCT
ACCCTGCGTGACTTCGGCCTGGGCAAGAAATCACTGGAGCAGTGGGTGACAGAGGAGGCTGGCCACCTCT
GCGATGCTTTCACCAAGGAGGCCGAACATCCCTTCAATCCCAGCCCCCTCCTAAGTAAAGCTGTGAGCAA
CGTGATCGCCTCCCTCATTTATGCTCGTCGATTTGAGTATGAAGACCCTTTCTTCAACAGGATGCTCAAA
ACATTGAAGGAAAGCTTAGGAGAAGACACTGGCTTCGTCGGAGAGGTGCTGAATGCCATCCCAATGCTAC
TACACATCCCTGGTTTGCCTGATAAAGCCTTCCCCAAGCTGAATTCATTCATAGCCTTAGTGAATAAGAT
GTTAATTGAGCACGACTCGACCTGGGATCCTGCACAGCCACCCCGAGATTTGACTGATGCCTTCCTGGCT
GAGGTGGAGAAGGCCAAGGGGAATCCTGAGAGCAGCTTCAATGATAAGAACCTGCGCATAGTGGTGATTG
ACCTGTTCATGGCAGGGATGGTGACCACCTCAACCACACTGTCCTGGGCCCTGCTGCTCATGATCCTGCA
TCCAGATGTGCAGCGCCGTGTCCACCAGGAAATCGACGAGGTCATAGGGCACGTGCGGCATCCAGAGATG
GCAGACCAGGCCCGCATGCCCTACACAAACGCGGTCATTCATGAGGTGCAACGCTTTGCAGACATCGTCC
CAACAAATTTACCACATATGACATCCCGAGACATTAAATTCCAAGACTTCTTCATCCCCAAGGGGACGAC
ACTCATTCCCAACCTGTCCTCCGTGCTGAAGGATGAGACTGTCTGGGAGAAGCCCCTCCGCTTCTATCCT
GAACACTTCCTGGATGCCCAGGGCCACTTTGTGAAGCACGAGGCCTTCATGCCATTCTCAGCAGGCCGCA
GATCATGCCTGGGGGAGCCCCTGGCCCGCATGGAGCTCTTCCTCTTCTTCACCTGCCTCCTGCAGCGCTT
TAGCTTCTCAGTGCCCGATGGACAGCCCAGACCCAGTGATTATGGCATCTATACAATGCCAGTTACTCCA
GAGCCCTATCAGCTCTGTGCAGTGGCTCGATAG

Translation (500 aa):
MGLLVGDDLWAVVIFTAIFLLLVDLVHRRQRWTACYPPGPVPFPGLGNLLQVDFENIPYSFYKLQNRYGN
VFSLQMAWKPVVVVNGLKAVRELLVTYGEDTSDRPLMPIYNHIGYGHKSKGVILAPYGPEWREQRRFSVS
TLRDFGLGKKSLEQWVTEEAGHLCDAFTKEAEHPFNPSPLLSKAVSNVIASLIYARRFEYEDPFFNRMLK
TLKESLGEDTGFVGEVLNAIPMLLHIPGLPDKAFPKLNSFIALVNKMLIEHDSTWDPAQPPRDLTDAFLA
EVEKAKGNPESSFNDKNLRIVVIDLFMAGMVTTSTTLSWALLLMILHPDVQRRVHQEIDEVIGHVRHPEM
ADQARMPYTNAVIHEVQRFADIVPTNLPHMTSRDIKFQDFFIPKGTTLIPNLSSVLKDETVWEKPLRFYP
EHFLDAQGHFVKHEAFMPFSAGRRSCLGEPLARMELFLFFTCLLQRFSFSVPDGQPRPSDYGIYTMPVTP
EPYQLCAVAR


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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