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Report for CCDS32890.2 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
32890.2 Public Homo sapiens 19 ZNF358 24 110 108 CCDS HistoryNCBI Gene:140467Re-query CCDS DB by CCDS ID:32890.2See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq, Havana and CCDS collaboration)

Sequence IDs included in CCDS 32890.2

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000597229.2 ENSP00000472305.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000597229.2Link to Ensembl Protein Viewer:ENSP00000472305.1Re-query CCDS DB by Nucleotide ID:ENST00000597229Re-query CCDS DB by Protein ID:ENSP00000472305
Original member Current member NCBI NM_018083.5 NP_060553.4 MANE Select Accepted alive Link to Nucleotide Sequence:NM_018083.5Link to Protein Sequence:NP_060553.4Re-query CCDS DB by Nucleotide ID:NM_018083Re-query CCDS DB by Protein ID:NP_060553Link to BLAST:NP_060553.4

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_060553.4 568 Q9NW07 568 100% 0 0

Chromosomal Locations for CCDS 32890.2

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 7519243 7520949 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1707 nt):
ATGCGGCGCTCAGTCCTGGTCAGGAACCCAGGCCACAAAGGCCTGAGACCCGTTTATGAAGAGCTCGACT
CTGACTCCGAGGACCTAGACCCCAATCCTGAAGATCTGGACCCGGTTTCTGAAGACCCAGAGCCTGATCC
TGAAGACCTCAACACTGTCCCGGAAGACGTGGACCCCAGCTATGAAGATCTGGAGCCCGTCTCGGAGGAT
CTGGACCCCGACGCCGAAGCTCCGGGCTCGGAACCCCAAGATCCCGACCCCATGTCTTCGAGTTTCGACC
TCGATCCAGATGTGATTGGCCCCGTACCCCTGATTCTCGATCCTAACAGCGACACCCTCAGCCCCGGCGA
TCCAAAAGTGGACCCCATCTCCTCTGGCCTCACTGCCACCCCCCAGGTCTTGGCCACCAGCCCCGCGGTG
CTCCCCGCCCCCGCCAGCCCGCCCCGGCCCTTCTCCTGCCCGGATTGCGGGCGAGCCTTCCGCCGCAGCT
CCGGGCTGAGCCAGCATCGCCGCACGCACAGCGGCGAGAAGCCGTACCGCTGCCCCGACTGCGGGAAGTC
CTTCAGCCACGGTGCCACCCTGGCTCAGCACCGTGGCATCCACACTGGGGCGCGGCCGTACCAGTGCGCG
GCCTGCGGCAAGGCCTTCGGCTGGCGCTCCACGCTGCTGAAACATCGCAGCAGCCACAGCGGGGAGAAGC
CGCACCACTGCCCGGTGTGTGGCAAGGCCTTCGGGCACGGCTCGCTCCTGGCACAGCACCTGCGCACGCA
CGGCGGCCCGCGGCCCCACAAGTGCCCGGTGTGCGCCAAGGGCTTCGGCCAGGGCTCTGCGCTGCTCAAA
CACCTGCGCACGCACACGGGCGAGCGGCCCTACCCGTGTCCGCAGTGCGGCAAGGCCTTCGGGCAGAGCT
CGGCGCTGCTGCAGCACCAGCGCACACACACGGCCGAGCGCCCCTACCGCTGCCCCCACTGCGGCAAAGC
CTTCGGGCAGAGCTCCAACTTGCAACACCACCTGCGCATCCACACGGGCGAGCGGCCCTACGCCTGCCCG
CACTGCTCCAAGGCCTTCGGCCAGAGCTCAGCGCTGCTCCAGCACCTGCACGTGCATTCGGGCGAGCGTC
CCTATCGCTGTCAGCTCTGCGGGAAGGCCTTCGGCCAGGCCTCCAGCCTCACCAAGCACAAACGGGTGCA
TGAGGGTGCAGCCGCTGCTGCAGCTGCCGCGGCCGCTGCAGCTGCAGCAGCGGCCGCCGGCCTGGGCCTC
GGGCCTGGCCTAAGCCCTGCATCCATGATGAGGCCGGGGCAGGTCTCCCTCCTGGGTCCTGATGCTGTTT
CTGTGCTCGGCTCTGGCTTGGGCCTCAGCCCTGGCACCAGCTCTGGCCGCAACCCTGACCCTGGCTCTGG
GCCGGGCACTCTGCCGGATCCCAGCTCCAAACCCCTCCCCGGCTCCAGATCCACCCCCAGCCCTACTCCT
GTGGAATCTTCTGACCCAAAGGCTGGGCACGACGCTGGTCCCGACCTTGTGCCCAGCCCAGACCTTGATC
CTGTGCCCAGCCCAGACCCTGATCCTGTGCCCAGCCCTGATCCCAACCCTGTGTCCTGCCCTGACCCCTG
TTCTCCCACTCGTGGCACTGTCAGCCCAGCCCTCCCTACCGGCGAGAGTCCAGAGTGGGTACAGGAGCAA
GGGGCACTGCTGGGGCCTGATGGCTGA

Translation (568 aa):
MRRSVLVRNPGHKGLRPVYEELDSDSEDLDPNPEDLDPVSEDPEPDPEDLNTVPEDVDPSYEDLEPVSED
LDPDAEAPGSEPQDPDPMSSSFDLDPDVIGPVPLILDPNSDTLSPGDPKVDPISSGLTATPQVLATSPAV
LPAPASPPRPFSCPDCGRAFRRSSGLSQHRRTHSGEKPYRCPDCGKSFSHGATLAQHRGIHTGARPYQCA
ACGKAFGWRSTLLKHRSSHSGEKPHHCPVCGKAFGHGSLLAQHLRTHGGPRPHKCPVCAKGFGQGSALLK
HLRTHTGERPYPCPQCGKAFGQSSALLQHQRTHTAERPYRCPHCGKAFGQSSNLQHHLRIHTGERPYACP
HCSKAFGQSSALLQHLHVHSGERPYRCQLCGKAFGQASSLTKHKRVHEGAAAAAAAAAAAAAAAAAGLGL
GPGLSPASMMRPGQVSLLGPDAVSVLGSGLGLSPGTSSGRNPDPGSGPGTLPDPSSKPLPGSRSTPSPTP
VESSDPKAGHDAGPDLVPSPDLDPVPSPDPDPVPSPDPNPVSCPDPCSPTRGTVSPALPTGESPEWVQEQ
GALLGPDG


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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