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Report for CCDS87406.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
87406.1 Public Homo sapiens 6 MEA1 24 110 108 CCDS HistoryNCBI Gene:4201Re-query CCDS DB by CCDS ID:87406.1Re-query CCDS DB by GeneID:4201See the combined annotation on chromosome 6 in Sequence Viewer

Public since: CCDS release 22, NCBI annotation release 109, Ensembl annotation release 92

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 87406.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000642748.1 ENSP00000495612.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000642748.1Link to Ensembl Protein Viewer:ENSP00000495612.1Re-query CCDS DB by Nucleotide ID:ENST00000642748Re-query CCDS DB by Protein ID:ENSP00000495612
Original member Current member NCBI NM_001363578.1 NP_001350507.1 Accepted alive Link to Nucleotide Sequence:NM_001363578.1Link to Protein Sequence:NP_001350507.1Re-query CCDS DB by Nucleotide ID:NM_001363578Re-query CCDS DB by Protein ID:NP_001350507Link to BLAST:NP_001350507.1

Chromosomal Locations for CCDS 87406.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 6 (NC_000006.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6See the combined annotation on chromosome 6 in Sequence Viewer

Chromosome Start Stop Links
6 43012470 43012621 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 43012926 43013028 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 43013115 43013389 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 43014062 43014098 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (567 nt):
ATGTGCAAATATGTGTCGAGACCGAGGAGGCCACTGGCCCCTGCCCGGATGGCAACAGTAGTTCTAGGAG
GAGACACCATGGGCCCTGAGCGTATCTTCCCCAATCAGACTGAGGAACTGGGACATCAGGGCCCTTCAGA
AGGCACTGGGGATTGGAGCAGTGAGGAGCCTGAGGAAGAGCAGGAGGAAACGGGGTCGGGCCCAGCTGGC
TACTCCTACCAGCCCCTGAACCAAGATCCTGAACAAGAGGAGGTGGAACTGGCACCAGTGGGGGATGGAG
ATGTAGTTGCTGACATCCAGGATCGAATCCAGGCCCTGGGGCTTCATTTGCCAGACCCACCATTAGAGAG
TGAAGATGAAGATGAGGAGGGAGCTACAGCGTTGAACAACCACAGCTCTATTCCCATGGACCCAGAACAT
GTAGAGCTGGTGAAAAGGACAATGGCTGGAGTAAGCCTGCCTGCGCCAGGGGTTCCTGCCTGGGCTCGGG
AGATATCGGATGCCCAGTGGGAAGATGTGGTACAGAAAGCCCTCCAAGCCCGGCAGGCATCCCCTGCCTG
GAAGTGA

Translation (188 aa):
MCKYVSRPRRPLAPARMATVVLGGDTMGPERIFPNQTEELGHQGPSEGTGDWSSEEPEEEQEETGSGPAG
YSYQPLNQDPEQEEVELAPVGDGDVVADIQDRIQALGLHLPDPPLESEDEDEEGATALNNHSSIPMDPEH
VELVKRTMAGVSLPAPGVPAWAREISDAQWEDVVQKALQARQASPAWK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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