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Report for CCDS17201.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
17201.1 Public Mus musculus 2 Eef1a2 23 108 98 CCDS HistoryNCBI Gene:13628Re-query CCDS DB by CCDS ID:17201.1Re-query CCDS DB by GeneID:13628See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 17201.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000055990.7 ENSMUSP00000054556.7 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000055990.7Link to Ensembl Protein Viewer:ENSMUSP00000054556.7Re-query CCDS DB by Nucleotide ID:ENSMUST00000055990Re-query CCDS DB by Protein ID:ENSMUSP00000054556
Original member Current member NCBI NM_007906.3 NP_031932.1 Accepted alive Link to Nucleotide Sequence:NM_007906.3Link to Protein Sequence:NP_031932.1Re-query CCDS DB by Nucleotide ID:NM_007906Re-query CCDS DB by Protein ID:NP_031932Link to BLAST:NP_031932.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_031932.1 463 P62631 463 100% 0 0

Chromosomal Locations for CCDS 17201.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 2 (NC_000068.7)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 181147979 181148106 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 181148598 181148832 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 181149676 181149932 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 181150919 181151069 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 181152784 181153080 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 181153651 181153830 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 181155263 181155406 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1392 nt):
ATGGGCAAGGAGAAGACACACATCAACATTGTGGTCATTGGCCACGTGGACTCAGGCAAGTCCACCACGA
CA
GGCCACCTCATCTACAAGTGTGGTGGCATCGACAAGCGGACCATCGAGAAGTTTGAGAAGGAGGCAGC
A
GAGATGGGGAAGGGCTCTTTTAAATATGCCTGGGTGCTGGACAAGCTGAAGGCCGAGCGGGAACGAGGC
ATC
ACCATCGACATCTCCCTCTGGAAGTTTGAGACCACCAAGTACTACATCACCATCATCGATGCTCCAG
GA
CACCGAGACTTCATCAAGAATATGATTACAGGCACATCCCAGGCGGACTGCGCAGTGCTGATCGTGGC
A
GCCGGTGTGGGCGAGTTTGAGGCGGGCATCTCCAAGAACGGGCAAACCCGGGAACACGCACTCCTGGCC
TAC
ACTCTGGGTGTGAAGCAGCTCATTGTGGGTGTCAACAAGATGGACTCCACGGAACCAGCCTACAGCG
AG
AAGCGCTATGATGAGATTGTTAAGGAGGTCAGCGCCTACATCAAGAAGATCGGCTACAACCCAGCCAC
G
GTGCCCTTCGTGCCCATCTCGGGCTGGCATGGTGACAACATGCTGGAGCCTTCACCTAATATGCCATGG
TTC
AAGGGCTGGAAAGTAGAGCGTAAGGAAGGAAATGCAAGCGGCGTGTCCCTGCTGGAAGCCCTGGACA
CA
ATCCTGCCCCCCACCCGCCCCACTGACAAGCCCCTTCGTCTGCCTCTGCAGGATGTGTACAAGATTGG
G
GGCATTGGGACCGTGCCTGTGGGCCGAGTGGAGACCGGTATCCTCCGGCCTGGTATGGTGGTGACCTTT
GCG
CCAGTCAACATCACCACAGAGGTGAAGTCTGTGGAAATGCACCATGAGGCACTTAGCGAGGCCCTGC
CT
GGTGACAATGTCGGGTTCAATGTGAAGAATGTGTCCGTTAAGGATATTCGCCGGGGCAATGTCTGCGG
G
GACAGCAAAGCTGACCCGCCTCAGGAGGCTGCCCAGTTCACCTCTCAGGTTATCATCCTGAACCACCCT
GGG
CAAATCAGCGCTGGCTACTCGCCAGTCATCGACTGTCACACGGCCCACATTGCCTGCAAGTTTGCCG
AG
CTAAAGGAGAAGATTGACCGTCGTTCTGGCAAGAAGCTGGAGGATAACCCCAAGTCCCTGAAGTCTGG
T
GATGCAGCCATTGTTGAGATGGTCCCTGGAAAACCCATGTGTGTGGAGAGCTTCTCACAGTACCCACCT
CTC
GGCCGCTTCGCCGTGCGCGACATGCGGCAGACTGTGGCCGTGGGCGTCATCAAGAACGTGGAGAAGA
AG
AGCGGCGGCGCAGGCAAGGTCACCAAGTCCGCACAGAAGGCTCAGAAAGCGGGCAAGTGA


Translation (463 aa):
MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAAEMGKGSFKYAWVLDKLKAERERG
I
TIDISLWKFETTKYYITIIDAPGHRDFIKNMITGTSQ
ADCAVLIVAAGVGEFEAGISKNGQTREHALLA
Y
TLGVKQLIVGVNKMDSTEPAYSEKRYDEIVKEVSAYIKKIGYNPATVPFVPISGWHGDNMLEPSPN
MPW
F
KGWKVERKEGNASGVSLLEALDTILPPTRPTDKPLRLPLQDVYKIG
GIGTVPVGRVETGILRPGMVVTF
A
PVNITTEVKSVEMHHEALSEALPGDNVGFNVKNVSVKDIRRGNVCGDSKADPPQEAAQFTSQ
VIILNHP
G
QISAGYSPVIDCHTAHIACKFAELKEKIDRRSGKKLEDNPKSLKSGDAAIVEMVPGKPMCVESFSQYPP
L
GRFAVRDMRQTVAVGVIKNVEKKSGGAGKVTKSAQKAQKAGK



Links Key
 Links to:   History report
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 Genome Browser Links:   Ensembl Genome Browser
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