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Report for CCDS26069.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
26069.1 Public Mus musculus 12 Tmem63c 23 108 98 CCDS HistoryNCBI Gene:217733Re-query CCDS DB by CCDS ID:26069.1Re-query CCDS DB by GeneID:217733See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 26069.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000110187.7 ENSMUSP00000105816.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000110187.7Link to Ensembl Protein Viewer:ENSMUSP00000105816.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000110187Re-query CCDS DB by Protein ID:ENSMUSP00000105816
Original member Current member EBI ENSMUST00000131878.1 ENSMUSP00000117023.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000131878.1Link to Ensembl Protein Viewer:ENSMUSP00000117023.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000131878Re-query CCDS DB by Protein ID:ENSMUSP00000117023
Original member Current member EBI ENSMUST00000146292.7 ENSMUSP00000119872.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000146292.7Link to Ensembl Protein Viewer:ENSMUSP00000119872.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000146292Re-query CCDS DB by Protein ID:ENSMUSP00000119872
Original member Current member NCBI NM_001361704.1 NP_001348633.1 Accepted alive Link to Nucleotide Sequence:NM_001361704.1Link to Protein Sequence:NP_001348633.1Re-query CCDS DB by Nucleotide ID:NM_001361704Re-query CCDS DB by Protein ID:NP_001348633Link to BLAST:NP_001348633.1
Original member Current member NCBI NM_172583.3 NP_766171.1 Accepted alive Link to Nucleotide Sequence:NM_172583.3Link to Protein Sequence:NP_766171.1Re-query CCDS DB by Nucleotide ID:NM_172583Re-query CCDS DB by Protein ID:NP_766171Link to BLAST:NP_766171.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001348633.1 802 Q8CBX0 802 100% 0 0
NP_766171.1 802 Q8CBX0 802 100% 0 0

Chromosomal Locations for CCDS 26069.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 12 (NC_000078.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 87056454 87056597 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 87057123 87057202 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 87057631 87057712 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 87061521 87061558 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 87065473 87065615 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 87066896 87066944 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 87069123 87069231 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 87071268 87071341 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 87071907 87071987 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 87072098 87072221 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 87072858 87072991 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 87075078 87075200 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 87075611 87075764 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 87076399 87076505 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 87077192 87077278 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 87077893 87077958 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 87081798 87081960 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 87082199 87082304 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 87082690 87082857 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 87084462 87084571 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 87086355 87086426 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 87089226 87089420 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2409 nt):
ATGTCTGCCTTTCCAGACAGCATGGACCAGAAGTTTCATAACATGACGGTGAATGAGTGCTTCCAGTCGC
GGAGCACTGTCCTCCAGGGGCAGCCCTTTGGGGGGATCCCCACCGTGCTCGTACTCAACATCATCTTATG
GGTGTTCGTTGTCCTGCTTTATTCCTTCCTCCGGAAAGCTGCGTGGGACTACGGGAGGCTGGCACTGCTG
ATACACAACGACAGCCTGACCTCACTGATCTACGGGGAGCAAAGTGAGAAGTCATCTCCGTCAGAGGTTT
CCTTGGAGGCGGAACGCAGGGACAGGGGCTTCTCTTCCTGGTTCTTCAACAGCCTAACCATGAGGGACCG
GGACCTGATCAACAAATGCGGGGATGATGCGCGAATTTACATCACGTTCCAGTATCACCTCATCATCTTT
GTGCTCATCCTCTGCATCCCCTCCCTGGGCATCATTTTGCCTGTTAACTACATTGGAACTGTTCTGGACT
GGAACAGTCACTTTGGCCGGACCACCATTGTCAATGTCTCTACAGAGAGCAAGTTCCTGTGGCTGCATAG
CCTCTTCGCGTTCTTGTACTTCCTCATCAACCTTGCCTTCATGGGTCATCACTGCTTGGGATTTGTGCCA
AAGAAGAGCCTCCACTTCACGAGGACACTGATGATCACCTATGTACCCACTGAAATCCAGGATCCCGAGA
TCATCAGCAAGCACTTCCATGAGGCCTATCCTGGATGTGTGGTGACCAGAGTCCATTTCTGCTATGATGT
CAGGAACCTGATTGACTTGGATGATCAAAGGCGCCATGCCATGCGGGGCAGGCTCTACTACACGGCCAAG
GCTAAGAAGACTGGGAAGGTCATGATCAAGACACATCCCTGTTCCCGCCTGTGCTTCTGCAAATGTTGGA
CCTGCTTCAAGGAGGTAGATGCGGAGCAGTACTACAGTGAGCTGGAGGAGCAGCTGACAGACGAGTTCAA
TGCTGAGCTTAATCGTGTCCAGCTGAAGAGGCTTGACCTGATCTTTGTCACCTTCCAGGATGCCAGGACA
GTGAGACGCATCTATGATGATTACAAGTACATCCATTGTGGTAGACACCCCAAGCAGTCTTCAGTCACGA
CCATCGTCAAAAACTACCACTGGAGGGTTGCTCATGCCCCTCACCCCAAAGACATCATCTGGAAGCACCT
GTCCATCCGCCGCTTCAGTTGGTGGACTCGCTTTATCGCCATCAATACCTTCCTGTTCTTCCTCTTCTTC
TTTCTCACCACACCTGCCATCATCATCAACACCATCGACATATACAATGTCACCCGCCCCATTGAGAAAT
TGCAGAGCCCAATCGTGACTCAGTTCTTCCCCTCTGTACTGCTCTGGGCCTTCACTGTGACAATGCCTCT
GCTGGTCTACTTATCGGCCTTCCTAGAGGCCCACTGGACAAGATCAAGTCAGAACCTGATCATAGTGCAC
AAATGCTACATCTTCCTGGTGTTTATGGTGGTCATTCTTCCCTCCATGGGGCTGACCAGTCTGCATGTGT
TTTTACGATGGCTCTTTGACATCTACTATCTTGAACATGCGACCATCAGGTTCCAGTGCGTGTTCCTCCC
AGACAATGGTGCATTCTTCATCAACTACGTGATCACAGCGGCTCTGCTTGGGACAGGCATGGAGCTGATG
CGCCTGGGGTCACTCTGCACATATTGTACCCGCCTCTTCTTATCCAAATCAGAGCCAGAAAGAGTTCACA
TCAGAAAGAACCAAGCCACAGATTTCCAGTTTGGACGAGAGTATGCATGGATGTTGAACGTCTTCAGCGT
GGTGATGGCGTATAGCATCACTTGCCCTATCATTGTCCCGTTTGGGCTGCTGTATCTGTGCATGAAGCAC
ATTACAGACCGCTATAACATGTACTACTCCTACGCGCCCACCAAACTCAACGCGCAGATCCACATGGCCG
CAGTCTACCAGGCCATTTTTGCCCCACTCTTGGGGCTCTTCTGGATGCTCTTCTTCTCCATCCTGCGAGT
AGGTTCCCTCCACAGCATCACCTTATTCTCCATGTCTTCCCTCATCATCTCCGTGGTCATTGCCTTTTCT
GGTGTTTTTCTGGGGAAGCTCCGGATTGCCCAACGGTATGAGCAGCCTGAGGAAGAAACAGAGACTGTGT
TTGATGTGGAACCAAGCAGCACCACCTCCACTCCCACCTCCCTTCTGTACGTGGCCACCGTGCTACAGGA
GCCAGAGCTGAACCTGACCCCCGCCTCCTCCCCAGCCCGGCACACCTATGGCACCATCAACAGCCAGCCA
GAAGAGGGAGAAGAAGAGAGCGGTCTGAGGGGCTTTGCAAGGGAGCTGGACTCAGCCCAGTTCCAGGAAG
GGCTGGAAATGGAGGGCCAGAGTCACTGA

Translation (802 aa):
MSAFPDSMDQKFHNMTVNECFQSRSTVLQGQPFGGIPTVLVLNIILWVFVVLLYSFLRKAAWDYGRLALL
IHNDSLTSLIYGEQSEKSSPSEVSLEAERRDRGFSSWFFNSLTMRDRDLINKCGDDARIYITFQYHLIIF
VLILCIPSLGIILPVNYIGTVLDWNSHFGRTTIVNVSTESKFLWLHSLFAFLYFLINLAFMGHHCLGFVP
KKSLHFTRTLMITYVPTEIQDPEIISKHFHEAYPGCVVTRVHFCYDVRNLIDLDDQRRHAMRGRLYYTAK
AKKTGKVMIKTHPCSRLCFCKCWTCFKEVDAEQYYSELEEQLTDEFNAELNRVQLKRLDLIFVTFQDART
VRRIYDDYKYIHCGRHPKQSSVTTIVKNYHWRVAHAPHPKDIIWKHLSIRRFSWWTRFIAINTFLFFLFF
FLTTPAIIINTIDIYNVTRPIEKLQSPIVTQFFPSVLLWAFTVTMPLLVYLSAFLEAHWTRSSQNLIIVH
KCYIFLVFMVVILPSMGLTSLHVFLRWLFDIYYLEHATIRFQCVFLPDNGAFFINYVITAALLGTGMELM
RLGSLCTYCTRLFLSKSEPERVHIRKNQATDFQFGREYAWMLNVFSVVMAYSITCPIIVPFGLLYLCMKH
ITDRYNMYYSYAPTKLNAQIHMAAVYQAIFAPLLGLFWMLFFSILRVGSLHSITLFSMSSLIISVVIAFS
GVFLGKLRIAQRYEQPEEETETVFDVEPSSTTSTPTSLLYVATVLQEPELNLTPASSPARHTYGTINSQP
EEGEEESGLRGFARELDSAQFQEGLEMEGQSH


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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