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Report for CCDS12652.2 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
12652.2 Public Homo sapiens 19 CLASRP 24 110 108 CCDS HistoryNCBI Gene:11129Re-query CCDS DB by CCDS ID:12652.2Re-query CCDS DB by GeneID:11129See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq, Havana and CCDS collaboration)

Sequence IDs included in CCDS 12652.2

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000221455.8 ENSP00000221455.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000221455.8Link to Ensembl Protein Viewer:ENSP00000221455.3Re-query CCDS DB by Nucleotide ID:ENST00000221455Re-query CCDS DB by Protein ID:ENSP00000221455
Original member Current member NCBI NM_007056.3 NP_008987.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_007056.3Link to Protein Sequence:NP_008987.2Re-query CCDS DB by Nucleotide ID:NM_007056Re-query CCDS DB by Protein ID:NP_008987Link to BLAST:NP_008987.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_008987.2 674 Q8N2M8-1 674 100% 0 0

Chromosomal Locations for CCDS 12652.2

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 45040213 45040311 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 45052071 45052168 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 45052791 45052892 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 45053098 45053177 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 45056450 45056534 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 45057750 45057898 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 45059268 45059364 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 45060389 45060467 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 45060554 45060627 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 45062154 45062195 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 45064012 45064227 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 45064343 45064630 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 45067337 45067594 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 45068015 45068054 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 45068420 45068480 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 45069066 45069124 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 45069202 45069248 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 45070022 45070104 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 45070537 45070561 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 45070803 45070845 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2025 nt):
ATGTGGCACGAGGCTCGGAAGCATGAGCGGAAGCTTCGAGGCATGATGGTCGACTACAAGAAGAGGGCGG
AGCGGAGACGGGAGTATTATGAAAAGATCAAGAAGGACCCAGCCCAGTTCCTGCAGGTACATGGCCGAGC
TTGCAAGGTGCACCTGGATTCTGCAGTCGCCCTGGCCGCTGAGAGCCCTGTTAATATGATGCCCTGGCAG
GGGGACACCAACAACATGATTGACCGATTCGATGTCCGTGCCCACCTGGACCACATCCCCGACTACACCC
CCCCTCTGCTCACCACCATCTCCCCAGAACAGGAGTCGGACGAACGGAAGTGTAACTACGAGCGCTACAG
AGGCCTGGTGCAGAACGACTTTGCCGGCATCTCAGAGGAGCAGTGCCTGTACCAGATCTACATTGATGAG
TTGTACGGAGGCCTCCAGAGACCCAGCGAAGATGAGAAGAAGAAGCTGGCAGAGAAGAAGGCTTCCATCG
GTTATACCTACGAGGACAGCACGGTGGCCGAGGTAGAGAAGGCGGCAGAAAAGCCAGAGGAGGAGGAGTC
AGCGGCCGAGGAGGAGAGCAACTCGGACGAAGATGAGGTCATCCCCGACATCGACGTGGAGGTGGACGTG
GATGAATTGAACCAGGAGCAGGTGGCAGATCTCAACAAACAGGCCACGACTTATGGCATGGCCGACGGTG
ACTTCGTCAGGATGCTCCGGAAAGACAAGGAGGAGGCAGAGGCCATCAAGCATGCCAAGGCTCTTGAGGA
GGAGAAGGCCATGTACTCGGGACGCCGCTCTCGACGCCAGCGGAGAGAGTTTCGGGAGAAGCGGCTGAGG
GGTCGCAAGATCAGCCCACCCAGCTATGCCCGCCGAGACAGCCCCACCTATGACCCCTATAAGCGGTCAC
CCTCGGAGTCCAGCTCAGAGTCCCGCTCCCGCTCCCGCTCCCCGACCCCGGGCCGCGAGGAGAAGATCAC
GTTCATCACCAGTTTTGGGGGCAGCGATGAGGAGGCAGCCGCAGCCGCTGCTGCCGCAGCAGCATCAGGA
GTCACCACAGGGAAGCCCCCCGCACCTCCCCAGCCTGGCGGCCCCGCCCCGGGACGTAATGCCAGCGCCC
GCCGCCGCTCCTCCTCCTCCTCCTCCTCCTCTTCTGCCTCGAGGACCTCCAGCTCCCGCTCCAGCTCTCG
CTCCAGCTCCCGCTCTCGCCGTGGTGGGGGCTACTACCGTTCCGGCCGCCACGCCCGCTCCCGGTCCCGC
TCCTGGTCCCGCTCCCGCTCCCGCTCCCGGCGCTATTCCCGGTCCCGTAGCCGTGGCCGGCGGCACTCAG
GTGGGGGCTCCCGAGACGGACACCGGTACTCCCGCTCGCCCGCCCGGCGTGGTGGTTACGGGCCCCGGCG
CAGAAGCAGGAGCCGCTCCCACTCAGGGGACCGCTACAGGCGGGGCGGCCGGGGCCTCAGGCACCACAGC
AGTAGCCGCAGCCGCAGCAGCTGGTCCCTCAGCCCGTCCCGCAGTCGCAGCCTGACTCGCAGCCGCAGCC
ATAGCCCCAGCCCCAGCCAGAGCCGCAGCCGCAGCCGCAGCCGCAGCCAGAGCCCCTCGCCATCACCCGC
AAGAGAGAAGCTGACCAGGCCGGCCGCGTCCCCTGCTGTGGGCGAGAAGCTGAAAAAGACCGAACCTGCC
GCTGGTAAAGAGACAGGAGCTGCCAAACCCAAGCTGACGCCTCAGGAGAAGCTGAAACTGAGGATGCAGA
AGGCGCTGAACAGGCAGTTCAAGGCGGATAAGAAGGCGGCACAAGAAAAGATGATCCAGCAGGAGCATGA
GCGGCAGGAGCGGGAAGACGAGCTTCGAGCCATGGCCCGCAAGATCCGCATGAAGGAGCGGGAACGCCGA
GAGAAGGAGAGAGAAGAGTGGGAACGCCAGTACAGCCGGCAGAGCCGCTCACCCTCCCCCCGATACAGTC
GAGAATACAGCTCTTCTCGAAGGCGCTCAAGGTCCCGATCCCGAAGCCCCCATTACCGACATTAG

Translation (674 aa):
MWHEARKHERKLRGMMVDYKKRAERRREYYEKIKKDPAQFLQVHGRACKVHLDSAVALAAESPVNMMPWQ
GDTNNMIDRFDVRAHLDHIPDYTPPLLTTISPEQESDERKCNYERYRGLVQNDFAGISEEQCLYQIYIDE
LYGGLQRPSEDEKKKLAEKKASIGYTYEDSTVAEVEKAAEKPEEEESAAEEESNSDEDEVIPDIDVEVDV
DELNQEQVADLNKQATTYGMADGDFVRMLRKDKEEAEAIKHAKALEEEKAMYSGRRSRRQRREFREKRLR
GRKISPPSYARRDSPTYDPYKRSPSESSSESRSRSRSPTPGREEKITFITSFGGSDEEAAAAAAAAAASG
VTTGKPPAPPQPGGPAPGRNASARRRSSSSSSSSSASRTSSSRSSSRSSSRSRRGGGYYRSGRHARSRSR
SWSRSRSRSRRYSRSRSRGRRHSGGGSRDGHRYSRSPARRGGYGPRRRSRSRSHSGDRYRRGGRGLRHHS
SSRSRSSWSLSPSRSRSLTRSRSHSPSPSQSRSRSRSRSQSPSPSPAREKLTRPAASPAVGEKLKKTEPA
AGKETGAAKPKLTPQEKLKLRMQKALNRQFKADKKAAQEKMIQQEHERQEREDELRAMARKIRMKERERR
EKEREEWERQYSRQSRSPSPRYSREYSSSRRRSRSRSRSPHYRH


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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