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Report for CCDS40205.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
40205.1 Public Mus musculus 8 Zfp358 23 108 98 CCDS HistoryNCBI Gene:140482Re-query CCDS DB by CCDS ID:40205.1Re-query CCDS DB by GeneID:140482See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 40205.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000061508.7 ENSMUSP00000060344.7 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000061508.7Link to Ensembl Protein Viewer:ENSMUSP00000060344.7Re-query CCDS DB by Nucleotide ID:ENSMUST00000061508Re-query CCDS DB by Protein ID:ENSMUSP00000060344
Original member Current member EBI ENSMUST00000208423.1 ENSMUSP00000146953.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000208423.1Link to Ensembl Protein Viewer:ENSMUSP00000146953.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000208423Re-query CCDS DB by Protein ID:ENSMUSP00000146953
Original member Current member NCBI NM_080461.2 NP_536709.2 Accepted alive Link to Nucleotide Sequence:NM_080461.2Link to Protein Sequence:NP_536709.2Re-query CCDS DB by Nucleotide ID:NM_080461Re-query CCDS DB by Protein ID:NP_536709Link to BLAST:NP_536709.2

Chromosomal Locations for CCDS 40205.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 8 (NC_000074.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 3495420 3497135 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1716 nt):
ATGAGGCGCTCAGTTCTGGTTAGGAATCCGGGCCATAAGAATCTTAGGCCCCTTTATGGAGACCTTCACT
CAGACCCAGAAGACCTGGACTCCAGTCCCAAAGATCCTGATCCTATTTCTGAAAGCCCTGAGCCAGAGCC
AGAAGACCTCAACACTGTCTCAGAAGATGGAGACGCCAGCTTAGAAGATCTGGACCCTGAAGCAGACGAA
GCTCCACGATCCATCTTGGGGAAGCCAGACTTGGATTCCCAAGATCTGGATCCCATGTCTTCGAGTTTCG
ACCTCGATCCTGATCCTGACGTGATTGGCCCGGTGCCACTAGTTCTCGACCCAAGCAATGACACCCCCAG
CCCTGCTGCTCCAGATGTGGATTCCCTTCCTTCTGGCCTCACTGCCACCCCCGAAATCTTGGCCACCAGT
CCAGCGGTGCTTCCTGCCCCTGCCAGTCCACCTCGTCCGTTCTCTTGTCCTGATTGTGGGCGAGCCTTCC
GTCGCAGCTCTGGGCTGAGCCAGCACCGACGCACACACAGTGGAGAGAAGCCTTACCGCTGTCCCGACTG
TGGCAAGTCATTCAGCCATGGCGCCACACTGGCCCAGCATCGTGGCATCCACACAGGTGCACGGCCCTAC
CAGTGTGCTGCCTGCGGCAAGGCCTTTGGCTGGCGATCCACACTGCTCAAGCATCGAAGCAGCCACAGTG
GGGAGAAGCCACACCACTGTCCCGTGTGTGGCAAGGCCTTCGGTCATGGCTCGTTGCTGGCCCAACACCT
GCGCACGCACGGCGGCCCTCGTCCCCACAAGTGCCCAGTGTGTGCCAAAGGCTTTGGGCAGGGCTCTGCG
CTACTTAAACACCTGCGCACCCACACAGGCGAGCGTCCCTACCCATGCCCGCAGTGCGGCAAGGCCTTTG
GGCAGAGCTCAGCGTTGCTCCAGCATCAGCGCACCCACACTGCTGAGCGTCCCTACCGCTGTCCCCACTG
TGGCAAAGCCTTTGGGCAGAGCTCCAACTTGCAGCACCACCTCCGAATCCACACTGGTGAGCGACCTTAT
GCCTGCCCACACTGCTCCAAGGCCTTTGGGCAGAGTTCAGCACTCCTACAACACCTCCACGTGCATTCTG
GCGAGCGCCCCTACCGTTGTCAGCTCTGTGGCAAAGCCTTTGGCCAAGCCTCCAGCCTCACCAAACATAA
GCGTGTGCATGAGGGAGCTGCAGCAGCCGCCGCCGCTGCTGCTGCTGCCGCCGCTGCAGCGGCCGCAGCA
GCTGGGCTGGGCCTCGGGTCTGGTTTGAGCCCAGTATCTATGATGAGGCCAGGGCAGATCTCTTTCCTGG
GTCCTGATGCTGTTTCTGTGCTGGAATCTGGCCTGGGCCTCAGTTCTGGAGCCAGCTCTGCCCGAAGTTC
TGCCCCTACTTCTGTACTGGGTTCACTCCAAAATCCCATCCTTCAGACCCACTCAGGATCTATCTCTAGT
CCCGATCTTGTTTTGTCTTCTGACCCTAAGCCAGGCCATGTTGCTGATCCTGATGTGGTACCCAGTCCTG
ACCAAGAATCTGATCCCAGCCCTAACCCCGATCTTGTCCCCAGTCCTGACCCCAAACCCAAGTCCCAAAC
TGACCCCTGCTCTCCGACTCACGACAGTTCCAGCCCAGCCCTTCCAACTGGAGAAAGTCCCAAGTGGGTA
AAGGAGGAAGGGGCATTGCTGGGGCCTGATGGATAA

Translation (571 aa):
MRRSVLVRNPGHKNLRPLYGDLHSDPEDLDSSPKDPDPISESPEPEPEDLNTVSEDGDASLEDLDPEADE
APRSILGKPDLDSQDLDPMSSSFDLDPDPDVIGPVPLVLDPSNDTPSPAAPDVDSLPSGLTATPEILATS
PAVLPAPASPPRPFSCPDCGRAFRRSSGLSQHRRTHSGEKPYRCPDCGKSFSHGATLAQHRGIHTGARPY
QCAACGKAFGWRSTLLKHRSSHSGEKPHHCPVCGKAFGHGSLLAQHLRTHGGPRPHKCPVCAKGFGQGSA
LLKHLRTHTGERPYPCPQCGKAFGQSSALLQHQRTHTAERPYRCPHCGKAFGQSSNLQHHLRIHTGERPY
ACPHCSKAFGQSSALLQHLHVHSGERPYRCQLCGKAFGQASSLTKHKRVHEGAAAAAAAAAAAAAAAAAA
AGLGLGSGLSPVSMMRPGQISFLGPDAVSVLESGLGLSSGASSARSSAPTSVLGSLQNPILQTHSGSISS
PDLVLSSDPKPGHVADPDVVPSPDQESDPSPNPDLVPSPDPKPKSQTDPCSPTHDSSSPALPTGESPKWV
KEEGALLGPDG


Links Key
 Links to:   History report
  BLAST report
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  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
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  VEGA Genome Browser

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