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Report for CCDS10117.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
10117.1 Public Homo sapiens 15 DUOX2 24 110 108 CCDS HistoryNCBI Gene:50506Re-query CCDS DB by CCDS ID:10117.1Re-query CCDS DB by GeneID:50506See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 10117.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000603300.1 ENSP00000475084.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000603300.1Link to Ensembl Protein Viewer:ENSP00000475084.1Re-query CCDS DB by Nucleotide ID:ENST00000603300Re-query CCDS DB by Protein ID:ENSP00000475084
Original member Current member NCBI NM_014080.5 NP_054799.4 Accepted alive Link to Nucleotide Sequence:NM_014080.5Link to Protein Sequence:NP_054799.4Re-query CCDS DB by Nucleotide ID:NM_014080Re-query CCDS DB by Protein ID:NP_054799Link to BLAST:NP_054799.4

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_054799.4 1548 Q9NRD8 1548 100% 0 0

Chromosomal Locations for CCDS 10117.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 15 (NC_000015.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 45094150 45094272 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 45094563 45094691 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 45094936 45095091 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 45095437 45095595 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 45095828 45096060 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 45097238 45097391 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 45097614 45097741 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 45098009 45098058 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 45099383 45099482 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 45099662 45099892 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 45100050 45100228 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 45100755 45100838 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 45101205 45101274 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 45101793 45101989 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 45103960 45104053 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 45104140 45104365 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 45105643 45105828 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 45106125 45106327 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 45106528 45106641 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 45106832 45106969 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 45107345 45107463 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 45108047 45108222 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 45108789 45108952 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 45109524 45109626 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 45109890 45109980 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 45110428 45110524 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 45110650 45110710 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 45111111 45111277 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 45111384 45111585 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 45111768 45111955 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 45112554 45112718 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 45112987 45113072 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 45113338 45113411 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (4647 nt):
ATGCTCCGTGCAAGACCAGAGGCACTGATGCTCCTGGGAGCTCTTCTGACTGGATCCCTGGGTCCATCGG
GCAATCAGGACGCACTCTCACTGCCCTGGGAAGTGCAGCGCTATGACGGCTGGTTTAACAACCTGAGGCA
CCACGAGCGTGGTGCTGTTGGCTGCCGGTTGCAGCGCCGCGTACCAGCCAATTACGCCGACGGTGTGTAT
CAGGCTCTGGAGGAGCCGCAGCTGCCCAACCCGCGCCGGCTCAGCAACGCAGCCACGCGGGGCATAGCCG
GCCTGCCGTCGCTCCACAACCGCACCGTACTGGGGGTCTTCTTTGGCTACCATGTTCTTTCCGACGTGGT
GAGCGTGGAAACGCCCGGTTGCCCCGCCGAGTTCCTCAACATCCGCATCCCACCTGGAGACCCCGTGTTC
GACCCCGACCAGCGCGGGGACGTGGTGCTGCCCTTCCAGAGGAGCCGCTGGGACCCCGAGACCGGACGGA
GTCCCAGCAACCCCCGGGACCTGGCCAACCAGGTGACGGGCTGGCTGGACGGCAGCGCCATCTATGGCTC
CTCGCACTCCTGGAGCGACGCGCTGCGGAGCTTCTCGGGGGGACAGCTGGCGTCGGGGCCCGACCCCGCT
TTCCCCCGAGACTCGCAGAACCCCCTGCTCATGTGGGCGGCGCCCGACCCCGCCACCGGGCAGAACGGGC
CCCGGGGGCTGTACGCCTTCGGGGCAGAGAGAGGGAACCGGGAACCCTTCCTGCAGGCGCTGGGCCTGCT
CTGGTTCCGCTACCACAACCTGTGGGCGCAGAGGCTGGCCCGCCAGCACCCAGACTGGGAGGACGAGGAG
CTGTTCCAGCACGCACGCAAGAGGGTCATCGCCACCTACCAGAACATCGCTGTGTATGAGTGGCTGCCCA
GCTTCCTGCAGAAAACACTCCCGGAGTATACAGGATACCGTCCTTTCCTAGACCCCAGCATCTCCCCGGA
ATTTGTGGTGGCCTCTGAGCAGTTCTTCTCTACCATGGTGCCCCCTGGTGTCTACATGAGAAATGCCAGC
TGTCATTTCCGGAAGGTCCTGAACAAGGGTTTTCAAAGCTCCCAAGCTCTCAGGGTCTGCAACAACTACT
GGATTCGGGAGAACCCCAATCTGAACAGTACCCAGGAGGTGAATGAGCTGCTGCTGGGAATGGCCTCCCA
GATTTCGGAGTTGGAGGACAACATAGTGGTTGAAGATCTGAGGGATTACTGGCCTGGCCCTGGCAAATTC
TCCCGTACAGACTATGTGGCCAGCAGCATCCAACGTGGCCGAGATATGGGGCTGCCCAGCTATAGCCAGG
CCCTGCTGGCCTTTGGGCTGGACATCCCAAGGAACTGGAGTGATCTCAACCCTAATGTGGACCCCCAGGT
GCTGGAGGCCACAGCTGCCCTGTACAACCAGGACCTATCCCAGCTAGAGCTGCTCCTTGGGGGGCTCCTG
GAGAGCCATGGGGACCCTGGACCCCTGTTCAGTGCCATTGTCCTCGACCAGTTTGTACGGCTGCGGGATG
GTGACCGCTACTGGTTTGAGAACACCAGGAATGGGCTGTTCTCCAAGAAGGAGATTGAAGACATCCGAAA
TACCACCCTGCGGGACGTGCTGGTCGCTGTTATCAACATTGACCCCAGTGCCCTGCAGCCCAATGTCTTT
GTCTGGCATAAAGGTGCACCCTGCCCTCAACCTAAGCAGCTCACAACTGACGGCCTGCCCCAGTGTGCAC
CCCTGACTGTGCTTGACTTCTTTGAAGGCAGCAGCCCTGGTTTTGCCATCACCATCATTGCTCTCTGCTG
CCTTCCCTTAGTGAGTCTGCTTCTCTCTGGAGTGGTGGCCTATTTCCGGGGCCGAGAACACAAGAAGCTA
CAAAAGAAACTCAAAGAGAGCGTGAAGAAGGAAGCAGCCAAAGATGGAGTGCCAGCGATGGAGTGGCCAG
GCCCCAAGGAGAGGAGCAGTCCCATCATCATCCAGCTGCTGTCAGACAGGTGTCTGCAGGTCCTGAACAG
GCATCTCACTGTGCTCCGTGTGGTCCAGCTGCAGCCTCTGCAGCAGGTCAACCTCATCCTGTCCAACAAC
CGAGGATGCCGCACCCTGCTGCTCAAGATCCCTAAGGAGTATGACCTGGTGCTGCTGTTTAGTTCTGAAG
AGGAACGGGGCGCCTTTGTGCAGCAGCTATGGGACTTCTGCGTGCGCTGGGCTCTGGGCCTCCATGTGGC
TGAGATGAGCGAGAAGGAGCTATTTAGGAAGGCTGTGACAAAGCAGCAGCGGGAACGCATCCTGGAGATC
TTCTTCAGACACCTTTTTGCTCAGGTGCTGGACATCAACCAGGCCGACGCAGGGACCCTGCCCCTGGACT
CCTCCCAGAAGGTGCGGGAGGCCCTGACCTGCGAGCTGAGCAGGGCCGAGTTTGCCGAGTCCCTGGGCCT
CAAGCCCCAGGACATGTTTGTGGAGTCCATGTTCTCTCTGGCTGACAAGGATGGCAATGGCTACCTGTCC
TTCCGAGAGTTCCTGGACATCCTGGTGGTCTTCATGAAAGGCTCCCCAGAGGATAAGTCCCGTCTAATGT
TTACCATGTATGACCTGGATGAGAATGGCTTCCTCTCCAAGGACGAATTCTTCACCATGATGCGATCCTT
CATCGAGATCTCCAACAACTGCCTGTCCAAGGCCCAGCTGGCCGAGGTGGTGGAGTCTATGTTCCGGGAG
TCGGGATTCCAGGACAAGGAGGAGCTGACATGGGAGGATTTTCACTTCATGCTGCGGGACCATGACAGCG
AGCTCCGCTTCACGCAGCTCTGTGTCAAAGGTGGAGGTGGAGGTGGAAATGGTATTAGAGATATCTTTAA
ACAAAACATCAGCTGTCGAGTCTCGTTCATCACTCGGACACCTGGGGAGCGCTCCCACCCCCAGGGACTG
GGGCCCCCTGCCCCAGAAGCCCCAGAGCTGGGAGGCCCTGGACTGAAGAAGAGGTTTGGCAAAAAGGCAG
CAGTGCCCACTCCCCGGCTGTACACAGAGGCGCTGCAAGAGAAGATGCAGCGAGGCTTCCTAGCCCAAAA
GCTGCAGCAGTACAAGCGCTTCGTGGAGAACTACCGGAGGCACATCGTGTGTGTGGCAATCTTCTCGGCC
ATCTGTGTTGGCGTGTTTGCAGATCGTGCTTACTACTATGGCTTTGCCTCGCCACCCTCGGACATTGCAC
AGACCACCCTCGTGGGCATCATCCTGTCACGAGGCACGGCGGCCAGCGTCTCCTTCATGTTCTCTTATAT
CTTGCTCACCATGTGCCGCAACCTCATAACCTTCCTGCGAGAGACTTTCCTCAACCGCTATGTGCCTTTT
GATGCCGCAGTGGACTTCCACCGCTGGATCGCCATGGCTGCTGTTGTCCTGGCCATTTTGCACAGTGCTG
GCCACGCAGTCAATGTCTACATCTTCTCAGTCAGCCCACTCAGCCTGCTGGCCTGCATATTCCCCAACGT
CTTTGTGAATGATGGGTCCAAGCTTCCCCAGAAGTTCTATTGGTGGTTCTTCCAGACCGTCCCAGGTATG
ACAGGTGTGCTTCTGCTCCTGGTCCTGGCCATCATGTATGTCTTCGCCTCCCACCACTTCCGCCGCCGCA
GCTTCCGGGGCTTCTGGCTGACCCACCACCTCTACATCCTGCTCTATGCCCTGCTCATCATCCATGGCAG
CTATGCTCTGATCCAGCTGCCCACTTTCCACATCTACTTCCTGGTCCCGGCAATCATCTATGGAGGTGAC
AAGCTGGTGAGCCTGAGCCGGAAGAAGGTGGAGATCAGCGTGGTGAAGGCGGAGCTGCTGCCCTCAGGAG
TGACCTACCTGCAATTCCAGAGGCCCCAAGGCTTTGAGTACAAGTCAGGACAGTGGGTGCGGATCGCCTG
CCTGGCTCTGGGGACCACCGAGTACCACCCCTTCACACTGACCTCCGCGCCCCATGAGGACACACTCAGC
CTGCACATCCGGGCAGTGGGGCCCTGGACCACTCGCCTCAGGGAGATCTACTCATCCCCAAAGGGCAATG
GCTGTGCTGGATACCCAAAGCTGTACCTTGATGGACCGTTTGGAGAGGGCCATCAGGAGTGGCATAAATT
TGAGGTGTCAGTGTTGGTGGGAGGGGGCATTGGGGTCACCCCCTTTGCCTCCATCCTCAAAGACCTGGTC
TTCAAGTCATCCTTGGGCAGCCAAATGCTGTGTAAGAAGATCTACTTCATCTGGGTGACACGGACCCAGC
GTCAGTTTGAGTGGCTGGCTGACATCATCCAAGAGGTGGAGGAGAACGACCACCAGGACCTGGTGTCTGT
GCACATTTATGTCACCCAGCTGGCTGAGAAGTTCGACCTCAGGACCACCATGCTATACATCTGCGAGCGG
CACTTCCAGAAAGTGCTGAACCGGAGTCTGTTCACGGGCCTGCGCTCCATCACCCACTTTGGCCGTCCCC
CCTTCGAGCCCTTCTTCAACTCCCTGCAGGAGGTCCACCCACAGGTGCGCAAGATCGGGGTGTTCAGCTG
CGGCCCTCCAGGAATGACCAAGAATGTAGAGAAGGCCTGTCAGCTCGTCAACAGGCAGGACCGAGCCCAC
TTCATGCACCACTATGAGAACTTCTGA

Translation (1548 aa):
MLRARPEALMLLGALLTGSLGPSGNQDALSLPWEVQRYDGWFNNLRHHERGAVGCRLQRRVPANYADGVY
QALEEPQLPNPRRLSNAATRGIAGLPSLHNRTVLGVFFGYHVLSDVVSVETPGCPAEFLNIRIPPGDPVF
DPDQRGDVVLPFQRSRWDPETGRSPSNPRDLANQVTGWLDGSAIYGSSHSWSDALRSFSGGQLASGPDPA
FPRDSQNPLLMWAAPDPATGQNGPRGLYAFGAERGNREPFLQALGLLWFRYHNLWAQRLARQHPDWEDEE
LFQHARKRVIATYQNIAVYEWLPSFLQKTLPEYTGYRPFLDPSISPEFVVASEQFFSTMVPPGVYMRNAS
CHFRKVLNKGFQSSQALRVCNNYWIRENPNLNSTQEVNELLLGMASQISELEDNIVVEDLRDYWPGPGKF
SRTDYVASSIQRGRDMGLPSYSQALLAFGLDIPRNWSDLNPNVDPQVLEATAALYNQDLSQLELLLGGLL
ESHGDPGPLFSAIVLDQFVRLRDGDRYWFENTRNGLFSKKEIEDIRNTTLRDVLVAVINIDPSALQPNVF
VWHKGAPCPQPKQLTTDGLPQCAPLTVLDFFEGSSPGFAITIIALCCLPLVSLLLSGVVAYFRGREHKKL
QKKLKESVKKEAAKDGVPAMEWPGPKERSSPIIIQLLSDRCLQVLNRHLTVLRVVQLQPLQQVNLILSNN
RGCRTLLLKIPKEYDLVLLFSSEEERGAFVQQLWDFCVRWALGLHVAEMSEKELFRKAVTKQQRERILEI
FFRHLFAQVLDINQADAGTLPLDSSQKVREALTCELSRAEFAESLGLKPQDMFVESMFSLADKDGNGYLS
FREFLDILVVFMKGSPEDKSRLMFTMYDLDENGFLSKDEFFTMMRSFIEISNNCLSKAQLAEVVESMFRE
SGFQDKEELTWEDFHFMLRDHDSELRFTQLCVKGGGGGGNGIRDIFKQNISCRVSFITRTPGERSHPQGL
GPPAPEAPELGGPGLKKRFGKKAAVPTPRLYTEALQEKMQRGFLAQKLQQYKRFVENYRRHIVCVAIFSA
ICVGVFADRAYYYGFASPPSDIAQTTLVGIILSRGTAASVSFMFSYILLTMCRNLITFLRETFLNRYVPF
DAAVDFHRWIAMAAVVLAILHSAGHAVNVYIFSVSPLSLLACIFPNVFVNDGSKLPQKFYWWFFQTVPGM
TGVLLLLVLAIMYVFASHHFRRRSFRGFWLTHHLYILLYALLIIHGSYALIQLPTFHIYFLVPAIIYGGD
KLVSLSRKKVEISVVKAELLPSGVTYLQFQRPQGFEYKSGQWVRIACLALGTTEYHPFTLTSAPHEDTLS
LHIRAVGPWTTRLREIYSSPKGNGCAGYPKLYLDGPFGEGHQEWHKFEVSVLVGGGIGVTPFASILKDLV
FKSSLGSQMLCKKIYFIWVTRTQRQFEWLADIIQEVEENDHQDLVSVHIYVTQLAEKFDLRTTMLYICER
HFQKVLNRSLFTGLRSITHFGRPPFEPFFNSLQEVHPQVRKIGVFSCGPPGMTKNVEKACQLVNRQDRAH
FMHHYENF


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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