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Report for CCDS35598.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
35598.1 Public Mus musculus 1 Cryge 23 108 98 CCDS HistoryNCBI Gene:12968Re-query CCDS DB by CCDS ID:35598.1See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 35598.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000087359.5 ENSMUSP00000084617.5 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000087359.5Link to Ensembl Protein Viewer:ENSMUSP00000084617.5Re-query CCDS DB by Nucleotide ID:ENSMUST00000087359Re-query CCDS DB by Protein ID:ENSMUSP00000084617
Original member NCBI NM_007777.3 NP_031803.3 Updated not alive Link to Nucleotide Sequence:NM_007777.3Link to Protein Sequence:NP_031803.3Re-query CCDS DB by Nucleotide ID:NM_007777Re-query CCDS DB by Protein ID:NP_031803
Current member NCBI NM_007777.4 NP_031803.3 Accepted alive Link to Nucleotide Sequence:NM_007777.4Link to Protein Sequence:NP_031803.3Re-query CCDS DB by Nucleotide ID:NM_007777Re-query CCDS DB by Protein ID:NP_031803Link to BLAST:NP_031803.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_031803.3 174 Q03740 174 100% 0 0

Chromosomal Locations for CCDS 35598.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 1 (NC_000067.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 65048624 65048896 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 65050770 65051012 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 65051105 65051113 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (525 nt):
ATGGGGAAGATCACCTTCTATGAGGACCGCGGCTTCCAGGGCCGCCACTATGAGTGCAGCACCGACCACT
CCAACCTGCAGCCCTACTTCAGCCGCTGCAACTCTGTGCGCGTGGACAGTGGCTGCTGGATGCTCTATGA
GCAGCCCAACTTCGCAGGCTGCCAGTACTTCCTGCGTCGCGGGGACTACCCTGACTACCAGCAGTGGATG
GGTTTCAGTGACTCTGTCCGCTCCTGCCGCCTCATCCCCCACTCCAGTTCTCACAGGATCAAGATCTACG
AGCGAGAGGACTACAGAGGCCAAATGGTGGAGATCACAGACGACTGCTCCCACCTGCAGGACCGCTTCCA
CTTCAGTGACTTCCACTCCTTCCACGTGATGGAGGGCTACTGGGTCCTCTACGAGATGCCCAACTACCGG
GGGCGGCAGTACCTGCTCAGGCCTGGGGAGTACAGGCGCTACCACGACTGGGGCGCCATGAATGCCAGGG
TGGGCTCTCTGAGGAGAATCATGGATTTCTATTGA

Translation (174 aa):
MGKITFYEDRGFQGRHYECSTDHSNLQPYFSRCNSVRVDSGCWMLYEQPNFAGCQYFLRRGDYPDYQQWM
GFSDSVRSCRLIPHSSSHRIKIYEREDYRGQMVEITDDCSHLQDRFHFSDFHSFHVMEGYWVLYEMPNYR
GRQYLLRPGEYRRYHDWGAMNARVGSLRRIMDFY


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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