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Report for CCDS15152.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
15152.1 Public Mus musculus 1 Ackr3 23 108 98 CCDS HistoryNCBI Gene:12778Re-query CCDS DB by CCDS ID:15152.1See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 15152.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000065587.4 ENSMUSP00000069114.4 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000065587.4Link to Ensembl Protein Viewer:ENSMUSP00000069114.4Re-query CCDS DB by Nucleotide ID:ENSMUST00000065587Re-query CCDS DB by Protein ID:ENSMUSP00000069114
Original member Current member NCBI NM_001271607.1 NP_001258536.1 Accepted alive Link to Nucleotide Sequence:NM_001271607.1Link to Protein Sequence:NP_001258536.1Re-query CCDS DB by Nucleotide ID:NM_001271607Re-query CCDS DB by Protein ID:NP_001258536Link to BLAST:NP_001258536.1
Original member Current member NCBI NM_007722.4 NP_031748.2 Accepted alive Link to Nucleotide Sequence:NM_007722.4Link to Protein Sequence:NP_031748.2Re-query CCDS DB by Nucleotide ID:NM_007722Re-query CCDS DB by Protein ID:NP_031748Link to BLAST:NP_031748.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001258536.1 362 P56485 362 100% 0 0
NP_031748.2 362 P56485 362 100% 0 0

Chromosomal Locations for CCDS 15152.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 1 (NC_000067.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 90213821 90214909 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1089 nt):
ATGGATGTGCACTTGTTTGACTATGCAGAGCCTGGCAACTACTCTGACATCAACTGGCCATGTAACAGCA
GCGACTGCATTGTGGTGGACACTGTGCAGTGTCCCACCATGCCTAACAAGAACGTGCTTCTGTATACCCT
CTCCTTCATCTACATTTTCATCTTCGTGATCGGCATGATTGCCAACTCTGTGGTGGTCTGGGTGAATATC
CAGGCTAAGACCACAGGCTACGACACGCACTGCTACATCTTGAACCTGGCCATTGCAGACCTGTGGGTCG
TCATCACCATCCCCGTCTGGGTGGTCAGTCTCGTGCAGCATAACCAGTGGCCCATGGGGGAGCTCACATG
CAAGATCACACACCTCATTTTCTCCATCAACCTCTTTGGGAGCATCTTCTTCCTCGCCTGCATGAGCGTG
GACCGCTATCTCTCCATCACCTACTTCACCGGCACCTCCAGCTATAAGAAGAAGATGGTACGCCGTGTTG
TATGCATCTTGGTGTGGCTGCTGGCCTTCTTTGTGTCCCTGCCTGATACCTACTACCTGAAGACGGTCAC
ATCTGCTTCCAACAATGAGACCTACTGCAGGTCCTTCTACCCCGAGCACAGCATCAAGGAGTGGCTGATC
GGCATGGAGCTGGTCTCTGTCATCTTGGGCTTTGCTGTCCCCTTCACTATCATTGCGATCTTCTACTTCC
TGCTCGCTAGAGCCATGTCAGCATCAGGCGACCAGGAGAAGCACAGTAGCCGGAAGATCATCTTCTCCTA
CGTGGTGGTCTTCCTGGTATGTTGGCTGCCGTACCATTTTGTGGTTCTGCTGGACATCTTCTCCATCTTA
CACTACATCCCGTTTACCTGTCAGCTGGAGAATGTGCTCTTTACAGCGTTGCATGTCACCCAGTGCCTGT
CCTTGGTGCACTGCTGTGTCAACCCCGTGCTCTACAGCTTCATCAACCGCAACTACAGGTACGAGCTGAT
GAAGGCCTTCATCTTCAAGTACTCGGCCAAAACAGGTCTCACCAAGCTCATTGATGCCTCCAGAGTGTCA
GAGACAGAGTACTCTGCCCTGGAACAGAACACCAAGTGA

Translation (362 aa):
MDVHLFDYAEPGNYSDINWPCNSSDCIVVDTVQCPTMPNKNVLLYTLSFIYIFIFVIGMIANSVVVWVNI
QAKTTGYDTHCYILNLAIADLWVVITIPVWVVSLVQHNQWPMGELTCKITHLIFSINLFGSIFFLACMSV
DRYLSITYFTGTSSYKKKMVRRVVCILVWLLAFFVSLPDTYYLKTVTSASNNETYCRSFYPEHSIKEWLI
GMELVSVILGFAVPFTIIAIFYFLLARAMSASGDQEKHSSRKIIFSYVVVFLVCWLPYHFVVLLDIFSIL
HYIPFTCQLENVLFTALHVTQCLSLVHCCVNPVLYSFINRNYRYELMKAFIFKYSAKTGLTKLIDASRVS
ETEYSALEQNTK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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