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Report for CCDS39928.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
39928.1 Public Mus musculus 7 Zfp715 23 108 98 CCDS HistoryNCBI Gene:69930Re-query CCDS DB by CCDS ID:39928.1Re-query CCDS DB by GeneID:69930See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 39928.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000048015.13 ENSMUSP00000040282.7 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000048015.13Link to Ensembl Protein Viewer:ENSMUSP00000040282.7Re-query CCDS DB by Nucleotide ID:ENSMUST00000048015Re-query CCDS DB by Protein ID:ENSMUSP00000040282
Original member Current member EBI ENSMUST00000107986.8 ENSMUSP00000103620.2 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000107986.8Link to Ensembl Protein Viewer:ENSMUSP00000103620.2Re-query CCDS DB by Nucleotide ID:ENSMUST00000107986Re-query CCDS DB by Protein ID:ENSMUSP00000103620
Original member Current member NCBI NM_001357811.1 NP_001344740.1 Accepted alive Link to Nucleotide Sequence:NM_001357811.1Link to Protein Sequence:NP_001344740.1Re-query CCDS DB by Nucleotide ID:NM_001357811Re-query CCDS DB by Protein ID:NP_001344740Link to BLAST:NP_001344740.1
Original member Current member NCBI NM_001357812.1 NP_001344741.1 Accepted alive Link to Nucleotide Sequence:NM_001357812.1Link to Protein Sequence:NP_001344741.1Re-query CCDS DB by Nucleotide ID:NM_001357812Re-query CCDS DB by Protein ID:NP_001344741Link to BLAST:NP_001344741.1
Original member Current member NCBI NM_027264.4 NP_081540.3 Accepted alive Link to Nucleotide Sequence:NM_027264.4Link to Protein Sequence:NP_081540.3Re-query CCDS DB by Nucleotide ID:NM_027264Re-query CCDS DB by Protein ID:NP_081540Link to BLAST:NP_081540.3

Chromosomal Locations for CCDS 39928.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 43297874 43300176 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 43301170 43301265 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 43301611 43301737 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 43311031 43311165 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2661 nt):
ATGACTCTTGAGGGATTTGGATTTGCTACGAAGAAAACGTCAAGAACAGAAGACAGAGGGGCCATGGCTG
CAGATCCAAATTTCCAACAGAAGAGCCAGCCATTGGGTGCAGAGGAGCAGCCTGAGTCCTGTGAGAGATG
GATGTCCTTTGAGGATGTAACTGTGAACTTCAGCCAGGAGGAGTGGCAGCATCTGGACTCCGCCCAGAGA
TGCCTGTACCAGGAGGTGATGCTGGAGATCTACAGCCACCTCTTGGCAGTGGGGTATTCCATTCCCAGTC
CTGGAGTCATCTTTAGGATGGAAAAAGGAAAGGAGGCACAGACAGCAAAGGCTGAATTCCCAGGCCAGAG
ATGTCAAGAAAAATCAGGAAATGATACCTTACCACAGAAAGCATCTGGGAAAACATCAGTTTATAGCAAT
GTGGCAAGTGAAGTGACAAGAGATGGTTCATGGTGTTCCCTTTTACAAGAACTATGGCAGGGTGCTGACA
TTACAAAGAGAGGTCAACAAAACCAGATTCTACTCTTCCCTCCTGGTTCTTTCCTCAAGAAAACTCTGAG
CAAAAATAGTGATCATGAATATCAAAAGCCCAGGGAAACCATTCCTTTGGGACCCTACCTCATTTCAACA
CAAGAGGGTCTTCCACAATATCACTCACTTCCAAAAAGTTTGGATGTAAGCCTAGGAGCAAATGGTCATA
ATGAAAGAGATCAGCTCATTGACATTGTTGCATCCAGTCAACTCCTTATACCAGGCTCCTGTAATGCTAA
CTGTGTGGTTACTCATGGAGGAGAAGAATCATACAGAAGTACTGGGAATGGAGATGTTCTCAGCCATAAA
CAACCACTGATCTATGGAAACCGTTTTCAGGTGAAAGCAGATCAAAGTTCTCAGTGCCAGGAGGTACTCT
ATGCCATATCTTTGCATAAACCTGAGATCACTCTCACTGTGGACAGACCTATTGTTTCCTACAATGGTGG
AAAGGCTTTCCTTTATGTGTCAGATTCACTGAGCCATCCATTCCAGCTGAAGGTGGACCGTGTAGTTCAT
ACTGGAGGAGACCCTTACAAGTGTAGCAGCTGTGAGAAATCCTTTTGTAATGCAGCTGCACTCCAACAGC
ACGAGCAAATTCACACAGAAGAGAAACTGTATGTGTGTACTCTGTGTGGAAAAGCCTTCAGTGATGGGTC
AGCTTTCTATGAACATGAATTGATTCACAAGAATCACACACCTTTTATCTGTGACATTTGTGGGAAGGCC
TTCTTACGTAAATCAGAGTTGACATCCCATAAACAATGTCACAATGGAGAGAAGCCTTACAAATGCAATG
ACTGTGAGAAGTCATTTAAATTTCCATCCCAACTGAAGGTGCATCATCAGATTCATACGGGTGAGAAGCC
TTATGAATGCCGTGAATGTGGGAAGTCATTCAGTAAAACAGCCAAACTCAAGGTGCATCAACGGATTCAC
ACAGGGGAGAAACCTTATGTGTGTTCTCAATGTGGAAAGGCCTTCAATCAGAAATCAATACTAGACCGGC
ATGAGAAGCTTCACCCTGGGGAGAAGCCTTACAAATGCAATGACTGTGGGAAGTCATTTAATTACCCATC
CCAACTGAAGGTGCATTGCCATAGTCACACAGGGGAGAAGCCTTACAAGTGCCATGAGTGTGGGAAATCA
TTTAACTTTCCATGTGAACTAAAGGTGCATTATCAGAATCACACGGGAGAGAAGCCGTACAAATGCCGTG
AATGTTGGAAACTGTTCAGTAAAATGTCCCAACTGAAGGCACATTATCGAGTTCACACAGGAGAAAGACC
TTATAAGTGCAGCCACTGTGGGAAAGCCTTCTCTACTAAGGAACAAGTCCAAGAGCATGAGCGAATCCAC
ACAGGAGAGAAACCCTTTGTGTGCACTGAATGTGGAAAAGCCTTCAGTAGCAGGTCATCTTTTCGTAAGC
ATCAGTTAATTCACACTAAAGAGAAACCTTTTGTCTCTCAGAAATGTGAGACAGGCCTCCAGGAGGCTAC
TTTGATACCCCATCAGCAACTTCATATTGGTGAGAAGCCTTACAAATGCCCTGATTGTGGGAAGTTGTTT
AATTATCCATCCCAATTGAAGTCACATTATCAAATCCACACAGGAGAGAAGCCTTGTAAATGTCCTGACT
GTGGGAAATCATTTAGTAAAACATCTCAACTGAAGGCACATTCTCGAATACACACAGGGGAAAGGCCTTA
TGTGTGTTCTGTGTGTGGGAAGGCCTTCAAACAGTTGTCAACATTGAGTAGACATGAAAAAATTCACATG
GTGGAAAAGCCTTACAAATGTAGTTTCTGTGGGAAGTCCTTTTGCTCTCCATCTGAACTGAAGGTGCATC
TTCTAATTCACACAGGGGAGAGACCTTATAAATGCAGCAGCTGTTGGAAAGCCTTTTGTACTAAGGTCCA
ACTCCAAGAACATGAGCGAATTCACACAGGAGAGAGACCTTATGTGTGCACTCATTGTGGGAAAGCCTTT
AGAAGCAGGTCAGTTTTCTCTAAACATAAGTTGATTCACAGGAAGGAAACACCTTTTATCTGTGAGAGAT
GTGGGAAAGTGTTCTTACAGAAGTCAGAGTTGACATCTCATCTACAAACTCATATTGAAGACAAACCTTA
A

Translation (886 aa):
MTLEGFGFATKKTSRTEDRGAMAADPNFQQKSQPLGAEEQPESCERWMSFEDVTVNFSQEEWQHLDSAQR
CLYQEVMLEIYSHLLAVGYSIPSPGVIFRMEKGKEAQTAKAEFPGQRCQEKSGNDTLPQKASGKTSVYSN
VASEVTRDGSWCSLLQELWQGADITKRGQQNQILLFPPGSFLKKTLSKNSDHEYQKPRETIPLGPYLIST
QEGLPQYHSLPKSLDVSLGANGHNERDQLIDIVASSQLLIPGSCNANCVVTHGGEESYRSTGNGDVLSHK
QPLIYGNRFQVKADQSSQCQEVLYAISLHKPEITLTVDRPIVSYNGGKAFLYVSDSLSHPFQLKVDRVVH
TGGDPYKCSSCEKSFCNAAALQQHEQIHTEEKLYVCTLCGKAFSDGSAFYEHELIHKNHTPFICDICGKA
FLRKSELTSHKQCHNGEKPYKCNDCEKSFKFPSQLKVHHQIHTGEKPYECRECGKSFSKTAKLKVHQRIH
TGEKPYVCSQCGKAFNQKSILDRHEKLHPGEKPYKCNDCGKSFNYPSQLKVHCHSHTGEKPYKCHECGKS
FNFPCELKVHYQNHTGEKPYKCRECWKLFSKMSQLKAHYRVHTGERPYKCSHCGKAFSTKEQVQEHERIH
TGEKPFVCTECGKAFSSRSSFRKHQLIHTKEKPFVSQKCETGLQEATLIPHQQLHIGEKPYKCPDCGKLF
NYPSQLKSHYQIHTGEKPCKCPDCGKSFSKTSQLKAHSRIHTGERPYVCSVCGKAFKQLSTLSRHEKIHM
VEKPYKCSFCGKSFCSPSELKVHLLIHTGERPYKCSSCWKAFCTKVQLQEHERIHTGERPYVCTHCGKAF
RSRSVFSKHKLIHRKETPFICERCGKVFLQKSELTSHLQTHIEDKP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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