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Report for CCDS23491.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
23491.1 Public Mus musculus 9 Cyb561d2 23 108 98 CCDS HistoryNCBI Gene:56368Re-query CCDS DB by CCDS ID:23491.1Re-query CCDS DB by GeneID:56368See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 23491.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000041459.8 ENSMUSP00000044093.3 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000041459.8Link to Ensembl Protein Viewer:ENSMUSP00000044093.3Re-query CCDS DB by Nucleotide ID:ENSMUST00000041459Re-query CCDS DB by Protein ID:ENSMUSP00000044093
Original member Current member EBI ENSMUST00000195235.5 ENSMUSP00000141723.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000195235.5Link to Ensembl Protein Viewer:ENSMUSP00000141723.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000195235Re-query CCDS DB by Protein ID:ENSMUSP00000141723
Original member NCBI NM_001357289.1 NP_001344218.1 Updated not alive Link to Nucleotide Sequence:NM_001357289.1Link to Protein Sequence:NP_001344218.1Re-query CCDS DB by Nucleotide ID:NM_001357289Re-query CCDS DB by Protein ID:NP_001344218
Current member NCBI NM_001357289.2 NP_001344218.1 Accepted alive Link to Nucleotide Sequence:NM_001357289.2Link to Protein Sequence:NP_001344218.1Re-query CCDS DB by Nucleotide ID:NM_001357289Re-query CCDS DB by Protein ID:NP_001344218Link to BLAST:NP_001344218.1
Original member NCBI NM_019720.4 NP_062694.1 Updated not alive Link to Nucleotide Sequence:NM_019720.4Link to Protein Sequence:NP_062694.1Re-query CCDS DB by Nucleotide ID:NM_019720Re-query CCDS DB by Protein ID:NP_062694
Current member NCBI NM_019720.5 NP_062694.1 Accepted alive Link to Nucleotide Sequence:NM_019720.5Link to Protein Sequence:NP_062694.1Re-query CCDS DB by Nucleotide ID:NM_019720Re-query CCDS DB by Protein ID:NP_062694Link to BLAST:NP_062694.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001344218.1 222 Q9WUE3 222 100% 0 0
NP_062694.1 222 Q9WUE3 222 100% 0 0

Chromosomal Locations for CCDS 23491.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 9 (NC_000075.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 107539882 107540385 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 107541003 107541040 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 107541497 107541623 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (669 nt):
ATGGCCCTTTCTGTGGAGACGGAGTCGCATATCTACCGAGCTCTGCGCACTGCCTCTGGGGCTGCAGCCC
ACCTCGTGGCGTTAGGCTTTACCATCTTTGTTGCTGTGCTTGCCAGACCTGGCTCCAGTCTGTTCTCCTG
GCACCCCGTTCTTATGTCTCTGGCTTTCTCCTTCCTGATGACCGAGGCACTCCTGATGTTCTCTCCTGAG
AGTTCCCTGCTGCGGTCCCTCTCTCGGAAGGTCCGCGCACGCTGCCACTGGGTGCTCCAGCTGCTGGCCC
TACTCTGTGCTCTGCTGGGTCTAGGTCTTGTCATCCTCCACAAAGAGCAGCTTGGCAAAGCACACCTGAC
CACTCGGCATGGGCAGGCAGGGCTGTTAGCTGTGCTGTGGGCAGGTCTGCAGTGTTCAGGGGGCATGGGG
CTGCTCTACCCCAAGTTGCTGCCCCGATGGCCCCTGGCAAAGCTGAAACTCTACCACGCCACTTCTGGGT
TGGTGGGCTACCTGCTGGGCAGTGCCAGCCTCCTGTTGGGCATGTTCTCACTCTGGTTCACTGCCACTGT
CACTGGTGGTGCCTGGTACCTGGCTGTGTTGTGCCCCATCCTCACCAGTTTGGTAATCATGAACCAAGTG
AGCAATGCCTACCTGTACCGCAAGAGGATCCAGCCATGA

Translation (222 aa):
MALSVETESHIYRALRTASGAAAHLVALGFTIFVAVLARPGSSLFSWHPVLMSLAFSFLMTEALLMFSPE
SSLLRSLSRKVRARCHWVLQLLALLCALLGLGLVILHKEQLGKAHLTTRHGQAGLLAVLWAGLQCSGGMG
LLYPKLLPRWPLAKLKLYHATSGLVGYLLGSASLLLGMFSLWFTATVTGGAWYLAVLCPILTSLVIMNQV
SNAYLYRKRIQP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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