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Report for CCDS22219.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
22219.1 Public Mus musculus 8 Dusp26 23 108 98 CCDS HistoryNCBI Gene:66959Re-query CCDS DB by CCDS ID:22219.1Re-query CCDS DB by GeneID:66959See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 22219.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000036631.13 ENSMUSP00000046794.7 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000036631.13Link to Ensembl Protein Viewer:ENSMUSP00000046794.7Re-query CCDS DB by Nucleotide ID:ENSMUST00000036631Re-query CCDS DB by Protein ID:ENSMUSP00000046794
Original member Current member EBI ENSMUST00000161713.1 ENSMUSP00000124949.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000161713.1Link to Ensembl Protein Viewer:ENSMUSP00000124949.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000161713Re-query CCDS DB by Protein ID:ENSMUSP00000124949
Original member Current member EBI ENSMUST00000170204.7 ENSMUSP00000126397.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000170204.7Link to Ensembl Protein Viewer:ENSMUSP00000126397.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000170204Re-query CCDS DB by Protein ID:ENSMUSP00000126397
Original member Current member NCBI NM_001357223.1 NP_001344152.1 Accepted alive Link to Nucleotide Sequence:NM_001357223.1Link to Protein Sequence:NP_001344152.1Re-query CCDS DB by Nucleotide ID:NM_001357223Re-query CCDS DB by Protein ID:NP_001344152Link to BLAST:NP_001344152.1
Original member Current member NCBI NM_025869.4 NP_080145.1 Accepted alive Link to Nucleotide Sequence:NM_025869.4Link to Protein Sequence:NP_080145.1Re-query CCDS DB by Nucleotide ID:NM_025869Re-query CCDS DB by Protein ID:NP_080145Link to BLAST:NP_080145.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001344152.1 211 Q9D700 211 100% 0 0
NP_080145.1 211 Q9D700 211 100% 0 0

Chromosomal Locations for CCDS 22219.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 8 (NC_000074.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 31091880 31092100 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 31094088 31094302 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 31096189 31096388 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (636 nt):
ATGTGCCCCGGTAACTGGCTCTGGGCCTCCATGACTTTTATGGCCCGCTTCTCTCGAGGCAGCTCAAGGT
CCCCTGTCCGTACTCGAGGGAGCCTGGAGGAGATGCCCTCTGTTCACCATCCCTTCCTCAACGTCTTTGA
GTTGGAAAGGCTCCTCTACACAGGCAAGACAGCCTGTAACCATGCTGACGAAGTCTGGCCGGGCCTCTAC
CTCGGAGACCAGGACATGGCCAACAACCGCCGTGAGCTTCGGCGCCTGGGCATCACCCACGTGCTCAACG
CCTCACACAACAGGTGGCGAGGCACCCCCGAGGCCTATGAGGGACTGGGCATCCGCTACCTGGGTGTGGA
GGCGCACGACTCTCCAGCCTTTGATATGAGCATCCACTTTCAGACGGCTGCGGACTTCATCCATCGGGCG
CTGAGCCAGCCAGGAGGGAAGATCCTGGTGCACTGTGCGGTGGGAGTGAGCAGATCCGCTACCCTGGTGC
TGGCCTACCTCATGCTGTATCACCACTTCACCCTTGTGGAGGCCATCAAGAAAGTCAAGGACCACCGAGG
CATCACCCCCAACCGGGGCTTCTTGAGGCAGCTCCTAGCCCTGGACCGTAGGCTGCGGCAGGGTCTAGAG
GCATGA

Translation (211 aa):
MCPGNWLWASMTFMARFSRGSSRSPVRTRGSLEEMPSVHHPFLNVFELERLLYTGKTACNHADEVWPGLY
LGDQDMANNRRELRRLGITHVLNASHNRWRGTPEAYEGLGIRYLGVEAHDSPAFDMSIHFQTAADFIHRA
LSQPGGKILVHCAVGVSRSATLVLAYLMLYHHFTLVEAIKKVKDHRGITPNRGFLRQLLALDRRLRQGLE
A


Links Key
 Links to:   History report
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  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
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