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Report for CCDS22695.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
22695.1 Public Mus musculus 8 1700030J22Rik 23 108 98 CCDS HistoryNCBI Gene:69528Re-query CCDS DB by CCDS ID:22695.1Re-query CCDS DB by GeneID:69528See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 22695.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000070577.6 ENSMUSP00000070601.5 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000070577.6Link to Ensembl Protein Viewer:ENSMUSP00000070601.5Re-query CCDS DB by Nucleotide ID:ENSMUST00000070577Re-query CCDS DB by Protein ID:ENSMUSP00000070601
Original member Current member EBI ENSMUST00000213068.1 ENSMUSP00000148789.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000213068.1Link to Ensembl Protein Viewer:ENSMUSP00000148789.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000213068Re-query CCDS DB by Protein ID:ENSMUSP00000148789
Original member Current member NCBI NM_001357253.1 NP_001344182.1 Accepted alive Link to Nucleotide Sequence:NM_001357253.1Link to Protein Sequence:NP_001344182.1Re-query CCDS DB by Nucleotide ID:NM_001357253Re-query CCDS DB by Protein ID:NP_001344182Link to BLAST:NP_001344182.1
Original member Current member NCBI NM_001357254.1 NP_001344183.1 Accepted alive Link to Nucleotide Sequence:NM_001357254.1Link to Protein Sequence:NP_001344183.1Re-query CCDS DB by Nucleotide ID:NM_001357254Re-query CCDS DB by Protein ID:NP_001344183Link to BLAST:NP_001344183.1
Original member Current member NCBI NM_027103.3 NP_081379.1 Accepted alive Link to Nucleotide Sequence:NM_027103.3Link to Protein Sequence:NP_081379.1Re-query CCDS DB by Nucleotide ID:NM_027103Re-query CCDS DB by Protein ID:NP_081379Link to BLAST:NP_081379.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001344182.1 409 Q8BHB7-1 409 100% 0 0
NP_001344183.1 409 Q8BHB7-1 409 100% 0 0
NP_081379.1 409 Q8BHB7-1 409 100% 0 0

Chromosomal Locations for CCDS 22695.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 8 (NC_000074.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 116971137 116972156 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 116973452 116973661 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1230 nt):
ATGGATGTCTGTGAGGAAAGCGAGACTTTTTTAGAAAATACAGAAAATCAGAAAATTGAAGCTACGGAAG
AGACGGCACCAACTTTACATTGTCCGGACGAGAAAAGTGAAAGGAGTCATGTCTGCTGCCTTCTTGGTGT
CAGCGACCTCACACTGGAAGAGGATGGGAGGGCCAGCGAGTGTGCCATCAGCACCGGGTGGGAGGAAGCT
GTCCATGGCTGGGGAAGGACCTCACCAACTGCCTGCATCTGGTCAAAGAAGAAAGTGAAAAGGGGGAGGG
CCAGAGAAGGCACCAATGGTGGCAACGACTGCTTGTTCTGTATGAGTCTTTCCCAAGGGAGTCTGGAGCC
CCGGTCCCTCTTGGAGGTTGGGAAACTGGAGGCGGGTGCTGAGGCCGAGGTGAGCACCCAGAAGAGCTGG
AGCTCTGAGAAGAACTGGAGCGGCCTCTCCCAGGGCCCCGGCACTGCTTCCAGAGAGCAGTCTAACAAAC
TCTGCATTCCCACCGACGTGCATGGAGAAAAAAAAAGCCTGCAACTCAAGGAGTTTATCTGGTGCATGGA
GGAGTGGCCTATGCCCGAGACAGTTAGCAGCAAGGCCGGCAGGAACCCCAGCGGAAGCCCCGAGCAAGGG
CTCTCCACCCCTGACTCCCTTGCAGCCAAGGCTCTTGTGGTTCTTCCCCCGCTGAAAAGCTCTCCCCACA
ACTTGGACGTCCTGAGTAAGAAAAGCAGGAATATTTTCTGGCAGCCGGAAGAAAAGGTGCTGAGGGTGGA
AAAAGACGATTGTATGGCTTGTGCAGATGGACTGAAAGGAGTAGACGGGAAAGGTGAAAAGAGACACTTT
GAGCTGGCCAGCCACGTGAAGGTCACCAACGTACTGCCTTTCCCACCCACTGCGGCCCAGACCCACCTGC
TGTCAGCCGAGTCCCAAAGGTGCTGCCTGCACTGGTCCCTCCTGCCCCAGAAAAGCACTGTGTTCCCACC
TAACCCCAGCGACATCCACTACCTTGCCACCCTGCAGGTTTTGGGGCAACAGGGAAAGCAAAGCTGCAGA
ACTAGGCTCAAAACCAAGGACACAAAACCTCCCAGGACCACTGCCAAGCATATTATCACAGAGGCCAAGC
AGCAAAACAGGCCCCACGTGCTAGAAAGCAAAGTCTTCCCTAAACCTCTCTTGCCATCCCTCACAGTGAG
CAGAGTTGTCATCCCCGTCTCCACCCACAGAGTACTCTGA

Translation (409 aa):
MDVCEESETFLENTENQKIEATEETAPTLHCPDEKSERSHVCCLLGVSDLTLEEDGRASECAISTGWEEA
VHGWGRTSPTACIWSKKKVKRGRAREGTNGGNDCLFCMSLSQGSLEPRSLLEVGKLEAGAEAEVSTQKSW
SSEKNWSGLSQGPGTASREQSNKLCIPTDVHGEKKSLQLKEFIWCMEEWPMPETVSSKAGRNPSGSPEQG
LSTPDSLAAKALVVLPPLKSSPHNLDVLSKKSRNIFWQPEEKVLRVEKDDCMACADGLKGVDGKGEKRHF
ELASHVKVTNVLPFPPTAAQTHLLSAESQRCCLHWSLLPQKSTVFPPNPSDIHYLATLQVLGQQGKQSCR
TRLKTKDTKPPRTTAKHIITEAKQQNRPHVLESKVFPKPLLPSLTVSRVVIPVSTHRVL


Links Key
 Links to:   History report
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  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
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