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Report for CCDS39284.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
39284.1 Public Mus musculus 5 Zfp664 23 108 98 CCDS HistoryNCBI Gene:269704Re-query CCDS DB by CCDS ID:39284.1Re-query CCDS DB by GeneID:269704See the combined annotation on chromosome 5 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 39284.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000111417.8 ENSMUSP00000107048.2 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000111417.8Link to Ensembl Protein Viewer:ENSMUSP00000107048.2Re-query CCDS DB by Nucleotide ID:ENSMUST00000111417Re-query CCDS DB by Protein ID:ENSMUSP00000107048
Original member NCBI NM_001081750.1 NP_001075219.1 Updated not alive Link to Nucleotide Sequence:NM_001081750.1Link to Protein Sequence:NP_001075219.1Re-query CCDS DB by Nucleotide ID:NM_001081750Re-query CCDS DB by Protein ID:NP_001075219
Current member NCBI NM_001081750.2 NP_001075219.1 Accepted alive Link to Nucleotide Sequence:NM_001081750.2Link to Protein Sequence:NP_001075219.1Re-query CCDS DB by Nucleotide ID:NM_001081750Re-query CCDS DB by Protein ID:NP_001075219Link to BLAST:NP_001075219.1

Chromosomal Locations for CCDS 39284.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 5 (NC_000071.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5See the combined annotation on chromosome 5 in Sequence Viewer

Chromosome Start Stop Links
5 124885544 124886329 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (786 nt):
ATGATCTACAAGTGCCCCATGTGCAGGGAATTTTTCTCTGAGAGAGCAGATCTTTTTATGCATCAGAAAA
TCCATACAGCAGAGAAACCCCATAAATGTGACAAATGTGATAAGGGTTTCTTTCACATATCAGAGCTTCA
TATTCATTGGCGAGACCACACAGGAGAGAAGGTGTATAAATGTGACGATTGCGGTAAGGATTTTAGCACG
ACGACCAAACTTAATAGACACAAGAAAATCCACACTGTGGAAAAGCCCTATAAATGCTATGAGTGTGGCA
AAGCCTTCAACTGGAGCTCCCACCTTCAAATCCACATGAGAGTCCACACTGGGGAGAAGCCGTACGTCTG
CAGTGAGTGCGGGAGGGGCTTCAGCAATAGTTCTAACCTCTGCATGCACCAGAGAGTCCACACTGGGGAG
AAGCCCTTCAAATGTGAAGAGTGTGGGAAAGCCTTCAGGCATACCTCCAGCCTCTGCATGCATCAAAGAG
TCCACACTGGAGAGAAGCCCTATAAATGTTATGAGTGTGGGAAGGCCTTCAGTCAGAGCTCCAGCCTCTG
CATCCACCAGAGAGTGCACACAGGGGAGAAGCCCTATAGGTGTTGTGGGTGTGGGAAGGCCTTCAGTCAG
AGTTCCAGCCTCTGCATCCACCAGAGAGTGCACACAGGGGAGAAGCCTTTTAAGTGTGATGAGTGTGGCA
AGGCCTTCAGCCAGAGTACAAGCCTTTGCATCCATCAGAGAGTACACACCAAGGAGAGGAACCATCTCAA
AATATCAGTTATATAA

Translation (261 aa):
MIYKCPMCREFFSERADLFMHQKIHTAEKPHKCDKCDKGFFHISELHIHWRDHTGEKVYKCDDCGKDFST
TTKLNRHKKIHTVEKPYKCYECGKAFNWSSHLQIHMRVHTGEKPYVCSECGRGFSNSSNLCMHQRVHTGE
KPFKCEECGKAFRHTSSLCMHQRVHTGEKPYKCYECGKAFSQSSSLCIHQRVHTGEKPYRCCGCGKAFSQ
SSSLCIHQRVHTGEKPFKCDECGKAFSQSTSLCIHQRVHTKERNHLKISVI


Links Key
 Links to:   History report
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  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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