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Report for CCDS11251.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
11251.1 Public Homo sapiens 17 ANKRD13B 24 110 108 CCDS HistoryNCBI Gene:124930Re-query CCDS DB by CCDS ID:11251.1See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)


Attributes
CDS uses downstream AUG

Sequence IDs included in CCDS 11251.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000394859.8 ENSP00000378328.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000394859.8Link to Ensembl Protein Viewer:ENSP00000378328.3Re-query CCDS DB by Nucleotide ID:ENST00000394859Re-query CCDS DB by Protein ID:ENSP00000378328
Original member Current member EBI ENST00000488766.5 ENSP00000431958.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000488766.5Link to Ensembl Protein Viewer:ENSP00000431958.1Re-query CCDS DB by Nucleotide ID:ENST00000488766Re-query CCDS DB by Protein ID:ENSP00000431958
Original member Current member EBI ENST00000614878.4 ENSP00000481530.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000614878.4Link to Ensembl Protein Viewer:ENSP00000481530.1Re-query CCDS DB by Nucleotide ID:ENST00000614878Re-query CCDS DB by Protein ID:ENSP00000481530
Original member Current member NCBI NM_152345.5 NP_689558.4 MANE Select Accepted alive Link to Nucleotide Sequence:NM_152345.5Link to Protein Sequence:NP_689558.4Re-query CCDS DB by Nucleotide ID:NM_152345Re-query CCDS DB by Protein ID:NP_689558Link to BLAST:NP_689558.4

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_689558.4 626 Q86YJ7-1 626 100% 0 0

Chromosomal Locations for CCDS 11251.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 17 (NC_000017.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 29593622 29593735 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 29607742 29607877 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 29607986 29608110 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 29608195 29608240 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 29608851 29608994 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 29609086 29609275 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 29609355 29609421 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 29610685 29610766 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 29611579 29611643 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 29611876 29612006 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 29612116 29612273 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 29612402 29612554 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 29612652 29612815 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 29612887 29612963 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 29613354 29613582 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1881 nt):
ATGATCCCCGCCAACGCCTCCGCCAGGAAGGGGCCCGAGGGCAAGTATCCGCTGCACTACCTCGTGTGGC
ACAACCGCCACCGCGAGCTGGAGAAGGAGGTCCGCGCGGGCCAGGTGGACATCGAGCAGCTGGATCCCCG
CGGCCGGACTCCCCTGCACCTGGCCACCACGCTGGGGCACCTTGAGTGTGCCCGTGTGCTCCTGGCGCAC
GGCGCAGACGTGGGCAGGGAGAATCGCAGCGGCTGGACAGTGCTCCAGGAGGCTGTGAGTACCCGGGACC
TGGAGCTGGTGCAGCTGGTGCTTCGGTACCGGGACTACCAGCGGGTGGTGAAGCGGCTGGCGGGCATCCC
CGTGCTCCTGGAGAAGCTGCGCAAGGCCCAGGACTTCTACGTGGAGATGAAATGGGAGTTCACTAGCTGG
GTGCCCCTGGTGTCCAAGATCTGCCCTAGTGACACCTACAAAGTGTGGAAGAGCGGCCAGAACCTGAGGG
TAGACACCACACTCCTGGGCTTTGACCACATGACCTGGCAGCGAGGGAACCGCAGCTTTGTCTTCAGGGG
CCAAGACACAAGCGCCGTGGTCATGGAGATTGACCACGACCGCCGGGTGGTGTACACAGAGACTCTGGCA
CTGGCTGGGCAGGACCGGGAGCTGCTGCTGGCTGCTGCTCAGCCCACTGAGGAACAGGTGCTGAGCCGGC
TTACCGCGCCCGTCGTCACCACTCAGCTTGACACCAAGAATATCTCCTTTGAGAGGAACAAGACTGGCAT
CCTGGGCTGGCGCAGTGAAAAGACGGAGATGGTGAATGGGTATGAAGCTAAGGTGTATGGGGCATCTAAC
GTGGAGCTCATCACCCGCACACGGACAGAACATCTTTCAGAACAGCACAAGGGCAAGGTCAAAGGCTGTA
AGACACCTTTGCAGTCCTTCCTGGGAATCGCTGAGCAGCACGGGGGCCCCCAAAATGGGACCCTGATCAC
TCAGACTCTGAGCCAAGCCAACCCCACTGCCATCACTGCAGAAGAATACTTCAACCCCAACTTTGAGCTG
GGCAACCGTGATATGGGCCGCCCCATGGAACTGACCACCAAGACACAGAAGTTCAAGGCCAAGCTGTGGC
TGTGTGAGGAGCATCCCCTGTCCCTGTGTGAGCAGGTGGCCCCCATCATTGACCTCATGGCCGTCAGCAA
TGCGCTTTTTGCCAAGCTCCGGGACTTCATCACCCTGCGTCTGCCTCCTGGCTTCCCAGTTAAGATTGAA
ATCCCGATCTTCCACATCCTCAACGCCCGCATCACCTTCGGGAACCTCAACGGCTGCGACGAACCGGTGC
CATCGGTGCGAGGCAGCCCCAGCAGCGAGACGCCTTCCCCAGGCAGCGACTCCTCCAGCGTCAGCAGCTC
CAGCTCCACGACCTCCTGCCGCGGCTGCGAGATCTCCCCAGCGTTGTTCGAGGCCCCGCGCGGCTACAGC
ATGATGGGCGGCCAGCGGGAGGCGGCGACCCGGGACGACGACGACGACCTGCTGCAATTCGCCATCCAGC
AGAGCCTGCTTGAGGCGGGCAGTGAGTATGACCAGGTCACCATCTGGGAGGCGCTAACCAACAGCAAGCC
AGGCACCCACCCCATGTCCTACGAGGGTCGCCGACAGGACAGGAGCGCCCCGCCCACGCCGCAGCGCCAG
CCTGCGCCCCCGGCGTCAGTGCCCAGCCCTCGGCCCAGCTCAGGGCCAGGTTCCGGCGGCCACGTGTTCC
GGAGCTACGACGAGCAGCTGCGGCTGGCGATGGAACTGTCGGCGCAGGAGCAGGAGGAGAGGCGGCGGCG
CGCGCGCCAGGAGGAGGAGGAGCTGGAGCGCATCCTGAGGCTCTCACTGACCGAGCAGTAG

Translation (626 aa):
MIPANASARKGPEGKYPLHYLVWHNRHRELEKEVRAGQVDIEQLDPRGRTPLHLATTLGHLECARVLLAH
GADVGRENRSGWTVLQEAVSTRDLELVQLVLRYRDYQRVVKRLAGIPVLLEKLRKAQDFYVEMKWEFTSW
VPLVSKICPSDTYKVWKSGQNLRVDTTLLGFDHMTWQRGNRSFVFRGQDTSAVVMEIDHDRRVVYTETLA
LAGQDRELLLAAAQPTEEQVLSRLTAPVVTTQLDTKNISFERNKTGILGWRSEKTEMVNGYEAKVYGASN
VELITRTRTEHLSEQHKGKVKGCKTPLQSFLGIAEQHGGPQNGTLITQTLSQANPTAITAEEYFNPNFEL
GNRDMGRPMELTTKTQKFKAKLWLCEEHPLSLCEQVAPIIDLMAVSNALFAKLRDFITLRLPPGFPVKIE
IPIFHILNARITFGNLNGCDEPVPSVRGSPSSETPSPGSDSSSVSSSSSTTSCRGCEISPALFEAPRGYS
MMGGQREAATRDDDDDLLQFAIQQSLLEAGSEYDQVTIWEALTNSKPGTHPMSYEGRRQDRSAPPTPQRQ
PAPPASVPSPRPSSGPGSGGHVFRSYDEQLRLAMELSAQEQEERRRRARQEEEELERILRLSLTEQ


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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