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Genome Displays Related Resources Gene HomoloGene MANE RefSeq
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Report for CCDS50583.1 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
50583.1 |
Public |
Mus musculus |
2 |
Rif1 |
23 |
108 |
98 |
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Public since: CCDS release 7, NCBI annotation release 37.2, Ensembl annotation release 61
Review status: Reviewed (by RefSeq and Havana) Sequence IDs included in CCDS 50583.1
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
Status in CCDS |
Seq. Status |
Links |
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EBI |
ENSMUST00000112693.9 |
ENSMUSP00000108313.2 |
Accepted |
alive |
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NCBI |
NM_001355414.1 |
NP_001342343.1 |
Accepted |
alive |
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NCBI |
NM_175238.6 |
NP_780447.4 |
Accepted |
alive |
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Chromosomal Locations for CCDS 50583.1
Assembly GRCm38.p6 (GCF_000001635.26)
CCDS Sequence Data |
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Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (7281 nt): ATGACGGCCCCAGGTCGCAGCCCCCTGGAGCCGCTTCTGGAGACTTGGGAAGACCCCTCGGTGCCTCCGG GAGAGCAGACGGACGCCTACCTAACTCTGACCAGTCGTATGACTGGAGAAGAAGGAAAAGAAGTCATTGC AGAAATCGAGAAAAACCTTTCTCGGCTGTACACGGTTTTAAAGGCTCACATTTCCAGTCAGAACTCAGAA CTGAGCAGTGCTGCTTTGCAAGCCTTGGGATTTTGTTTATATAATCCCAGAATTACCTCAGGATTGTCAG AGGCAAATATTCAAGAACTGCTTTTAACCTTGAATGGTATCATTAAGAGTTCAGACAAAAATGTGTGTAC CAGGGCACTGTGGGTAATATCCAAACAGACGTTTCCTGCTGAACTTGTTAGCAAAATGGTATCCAGTATT ATTGATTCATTGGAAGTGATACTAAGTAAAGGAGAGATACATTCTGCTGTTGTTGATTTTGAAGCATTAA ATGTTATTATAAGTCATTGGTTTCTTCATTGTAGGCTAATTGAACAAGCCCCAGTTCAAATGGGAGAAGA GTCTGTGAGGTGGGCCAAATTGGTCATACCATTAGTTGTTCACTCAGCACAAAAAGTACATTTGCGGGGA GCCACTGCTCTAGAGATGGGGATGCCATTGCTGCTTCAGAAACAACAAGAAATAGCCTTGATTACAGAGC ACCTTATGACTACTAAATTAATCTCAGAACTCCAAAAACTATTTAAGAATAAAAATGAGACTTATGTGTT AAAACTATGGCCTTTGTTTGTCAAACTTCTTGGAAAGACCTTGCACCGAAGTGGGAGTTTCATCAACTCT TTGTTACAGCTGGAAGAACTGGGCTTCCGTAGTGGAACACCCATGATTAAAAAAATCGCTTTCATTGCTT GGAAAAGCTTAATAGATAATTTTGCTTTAAACCCAGATATACTTTGTAGTGCAAAAAGACTGAAGTTGTT AATGCAACCCTTGAGTTCCATCCATGTGAGAACAGAAACTTTAGCATTAACAAAACTAGAAGTCTGGTGG TATTTACTGATGAGACTTGGACCTCAGCTCCCTGCCAATTTTGAACAGGTGTGCGTGCCACTGATTCAGA GTACAATAAGTGTTGATAGTATTCCTTCACCTCAAGGCAATTCATCTCGAGGGTCTGCTTCTCCAGGCTT AAGTCCACTGACTCCGGGACATAAAGGTGCTTCTCCTTATGGAAGTCCCCGTGGGAACCTGAGTTCAAAT ACAGGTGGAATGGCTGCAATCCCTTCTATTCAGCTTTTGGGACTGGAAATGATGCTTCATTTTTTGTTGG GCCCAGAAGTTTTGAGTTTTGCCAAGCAACACAAGATTGTATTGAGTTTAGAGCCACTGGAACACCCGCT AATCAGCAGCCCTTCTTTCTTCTCCAAGTATGCGCATACACTTATCACTGCTGTTCATGATAGCTTTGTC TCAGTTGGAAAGGATGCCTCAGATGCAGTAGTCAGTGCTATCTGGAAGGAGCTAATTAGCTTGGTGAAGT CAGTTACTGAAGCAGGAAACAGAAAAGAAAAATCAGGTTCTGAAGTTTTGACCCTTCTACTAAAATCTTT GGAAAACATAGTGAAGTCAGAAGTATTTCCTGTATCAAAAACACTGGTTCTCATGGAAATTACAGTTAAA GGACTTCCTCCGAAAGTACTAGGTTCACCAGCATATCAGGTTGCTAATATGGATATTCTTAATGGAACTC CAGCATTGTTTTTAATCCAGTTAATTTTCAACAACAATCTTTTAGAATGTGGTGTAGAAGATGAGAAGTT TTTTCTCAATCTAGAAACACTTGTAGGCTGTGTACTTTCTGGTCCAACATCACCACTGGCTTTTAGTGAT TCTGTTCTAACTGTGATTAATCAGAATGCAAAGCAGTTGGTAAACAAGGAGCATCTCTGGAGAATGTGGA GTATGATAGTCAGTCCACTGACTGATGTGATTCACCAGACCAATGAAGTGAATCAAGGCGATGCCTTAGA ACATAATTTTAGTGCCATCTATGGTGCATTGACTTTACCAATAAACCATATTTTTTCAGCTCAGACATTT CCCACGGGTACCATGAAAGCTTTACTTAAAACTTGGTCAGAATTGTATAGAGCATTTACTCGCTGTGCTT CTTTGGTGGCAACAGCAGAAGAGAATCTGTGCTGTGAAGAACTTTCTTCTAAAATAATGTGCAGTTTGGA AGATGAAGTCCTTTCAGATTTGCTATTCTTGGACAGGATCTCTCATATTATTATTGTAATGGTTGATTGT ATCGACTTTTCACCATATAATAAGAAATACCAGCCAAAAATCAAATCACCGCAGAGATCTTCAGATTGGT CCAGAAAGAAGAAGGAGCCTCTAGGGAAATTGGCTTCTTTATTTAAGCTAATTGTGAAAGTCATCGATAC TTTCCACACTCTAAGCCTCAAGGAAACATTCTCTGATACACTGCTTGCTATTGGTAACTCTATCATTAGC ATGCTTTCCAATGTATTTGGACATATTTCCTTGCCCTCTATGATCCGAGAAATATTTGCAACTTTTACAA GACCTCTGGCTTTACTGTATGAAAACTCAAAGCTGGATGAGGCTCCTAAAGTGTATACTAGTCTGAACAA CAAGTTAGAAAAGCTATTGGGAGAAATTGTTGCATGCCTACAGTTCAGCTATCTTGGAGCCTATGACAGT GAACTTCTTGAACATCTTTCTCCACTCCTGTGCGTAATATTTCTTCACAAGAATAAACAGATTCGGAAAC AGAGTGCTCTGTTGTGGAATGCCACATTTGCTAAAGCGACAGCTCTGGTTTATCCTGAGGAATTAAAACC AATATTAAGACAAGCCAAACAGAAAATTTTGCTTCTGCTGCCTGGTTTGGAAAATGTTGAAATGATGGAT GAGTCCAGTGAACCGTATTCAGAATCAACAGAGAATTCACAATTAAATGTCAAGATAAGTGGCATGGAAA GAAAATCAAGTGGAAAAAGAGATTCCATTTTGGCACATACAAAGGATAAAAAAAAAAAAGTGAAACTGTC GGCCAAACTGAAACTAGAATCTTCATCTCCAAAAATAAAGAGTGGTAAGCTTTTGGAAGAGGAAAAGTCT ACCGACTTTGTCTTCATTCCTCCAGAAGGAAAAGAGACAAAGGCAAGGGTTCTAACTGAGCATCAGAAAG AAGTACTCAAAACAAAACGGTGTGATATTCCTGCCTTGTATAATAATCTGGATGCTTCACAGGACACTTT ATTTTCTGCTCAGTTTAGTCAAGAAGAATCAATGGAAAGCCTCACTTTAACTGAAAAACCAAAAGAAGAT GCCAAGATAATTAAGGAAGAGCAAATGGAAAGTACTATTTTCATCCATCAAGATGCCCCGGAGAACTGTG GAATAGATGAACATTCTGAGAATGCTTCTTTACCAAATTGTGGTGGCTCTGTTGCTGAAACCAATCCAGA AACATTGATCACTGGTTTTGATGCTAGAAAAGAAGTATTAATTTCATCAAAGATATTGTCTGCTGAAAGT TCATCTAGTACAGAAACTTCGGTGGTCAGCAGTAGTTCAGTTTCTAATGCCACTTTTTCTGGAACTCCTC CACAGCCTACAAGTCGGAGACAAACCTTTATTACTTTGGAGAAATTTGATGGCTCAGAAACTAGACCTTT TAGTCCATCCCCCTTGAATAACATATCTTCCACTGTTACAGTGAGAAATAACCAGGATAACACAACTAAC ACTGACATGCCACCAAAAGCAAGGAAAAGAGAAGTGACGAACTCAAAATCTGATTCAGAAAATTTAGCGA ATGCAGGTAAGAAATCAAGTCGGAGATGGAGTAAAGCTGAGCAGTCAGTTACTAAAAAGTCTAAGCCATC ACTGACATCTGAACAGGAAGAGCACTCATCCGAAAATAACTCTCCTGATCTGCTCAGCCCAACAGAACAT GTGTCAGAAAATGATGATCATCCTTCTGAAGCTACCCTAGAGCATAAAGATGGAGATCCTAAACCAGCAG TAGAAAATGCTTCATTGGAAGACTTAACAACAGAAGAGAAAAATGTAGGCATTAATATGGAATCTAAAGA AAGTACAGCCTCAGTTGTAGCACGAACAGAACAAATAGTAAATGAAGATAGTCAGGCTGCTGCACTAGCC CCAAATCCAAAAACACTCCGACGGTCTTCGAGGCGGCGTTCAGAAGCTGTAGATTCTTGCAGTGACAGCC AAGAGAGAGAGAGTGGTCAGCAAAAAAAGGAAAGACGAAAGGAAGAAGAAAAAATAATCTCCAAGAGTCC GTTGCGTATCAAAGATGATAAGTTGCCCACGCAAAAACTAACTGATGAGTCACCTATACAGGAAAATTTA ACTGAAAAGGGAAATACTTTACCTGAGAGAACTTCAGGGGAACCCAGTGTTAATGCTGAAATTGACCAAA ATAGAAGAAAACCAGACCTTGAGAATGTTAGTTCTGAAGGAGGTGGTGGTACCCTGGACAATCTAGACAA GTCGTCTGAGAAACCTTTAAGAGGACGGACACGTTATCAAACAAGAAGAGCTTCGCAGGGTTTGATTTCT GCTGTTGAAAACTCAGAATCTGACAGTTCTGAGGCAAAGGAAGAAGTTTCTAGAAAGAAACGATCAGGGA AATGGAAAAATAGAAGCAGTGACAGTGTTGACATTGAAGAACAAGAAGAAAAAAAGGCTGAAGAGGAAGT TATGAAAACTGCAAATCAGACACTCGATGGCCAGGCAGTTCCTGATGTTGATGTAAATGCAGCGGCTCAG GTTTGTGAAAAAAGTACAAATAACAACAGGGTCATCCTCCAGGATTCTGCTGGGCCTGCAGATTCACTGC AAGCTCCACCCAAAGGCGAGGAGAAAAGTAAGATTAACAAATGTGTAGACAGTTCATTTGTAAGTCTACC TGTGCCAGAGTCAAACCTCAGGACTAGGAATGCCAGTAAGAGATTATTATATAAACAAGATAATGATAGT AATGTGAGGGTATCAGACAGCTCTCTGTCTCCCGAAAAATTCACCCAAGTTGAATGCCAACACAAGAGAA GTAGGAGAGTCAGGAGATCTAAAAGTTGTGACTGCTGTGGCGAAAAATCACAGTCCCAGGAAAAGTCATT TATTGGGTTAAAGAACACAGAAAGTTATGCTATAAAGAGTGTGGAGAAAAAAAAGACAGATCTACAAGTA CCTGAGACTGCCCCTGAAACTCGTGAAGCTCGTGACCATGCTGAAACAAAGTTGGCAGGCGAAGAGCCTC TTGTGAATTTTCATGTGGGTCTTAAAGAAGAGAATTGTACTACTGGTGATTCAGTTAAGTCTGAGGCTGA GTTGCAAGAAGCTTCCCTTCCACCTGAAATAGTAACTGTGAAAGAGAAGACTTACGATACAGACGCTAGT GAAGCAGTGTCTGAAATCCAAGGGCCATGTAGTGAGAACCACAGCCCTGCTGAGGACCCAGGCTTAAGTG AGTGCAAAGACATTTCACAGAAGCAGCTTTCAGAGAACGGAGAGCTTGACATCAGCGATGTAGGGAAGGC ATGCAAAGTCATAGCTGGGTCCAGTCCAGAGGGAGTTGAAACTATGGAATTAAATGTAAGAAATGATGCA TTTGTAGCTGCTGACTCTGAAAAGAGTACCCAAATGGATGTTTCTGTAGATGTGGCAACAGAGGAAGATA ATAAAAAAGATGAATGTGAAGCAGTCACAACTGAAGTGAATGTTGAAGGAGTAGCCACTGAGGACTTTAA TTCAGGTATGGATCTTTCTGATACTCCCATACCTGTAAGCAAGGATGTTGAGACTGAGCACGCAGCTAGT GGGGAAATAGAGGGGGAGAGCAATGAATCTGATTCAGGCTCATGTGAGGAAATGAACAAAGAAATGGGAA GTCACAAAGCCCAGATGAGCACTGAAATTGACAGTGCCAGGGTAAAGGAGACGGACATACTTGCCAGTGC CTCTAAATCTGAAGAAGCGCTGATTGGAAGACTAGACGTCAACACCCAGAGCTTTGTTAGTGACATTGAA ATGAGTTCTGGAGAAAGAACTGTTAATTGCAAAACTGAGACATCCATTGAACTTAATAAATTAGATGAAG CAAAATTAAGTGGCAATGAAGCTACAGTGGGAAATGATACTCTGCAGGAAGTTTGCTTTACTTCAGAGAA AGTGGAGAAATTACCACAGTGTCTGCTAGTTCAAGTGGCTTCTGAACTTGGAGCAGAAAGCAATACTACG TCTCCCGAAAAGTTAGAGCTGGATTCTTTTGGATCAGTAAATGAAAGTCCTAGTGGTATGCAGCAGGCAC GTTGTGTCTGGTCACCTTTGGCTTCTCCATCCACAAGCATTTTAAAGAGAGGACTAAAAAGATCCCAAGA AGATGAGATCTCACCAGTTAACAAGATTAGACGTGTCTCGTTTGCAGATCCAATATACCAAGCAGGATTG GCAGATGACATTGATAGGCGTTGCTCTGTTGTTAGATCTCATTCTTCAAATAGCTCTCCCATAATAAAAA GTGTTAAAACTTCACCTACTTCACACTCTAAGCATAATACCACTTCAGCCAAAGGATTTCTGTCCCCAGG ATCACAGAGCTCTAAATTTAAGAGCCCAAAGAAGTGTTTAATTACAGAAATGGCCCAAGAATCCATGCTG TCCCCAACAGAAAGTGTTTACCCAGCTTTGGTGAACTGTGCAGCATCAGTTGACATCATTTTACCTCAGA TTACATCAAATATGTGGGCAAGAGGTCTTGGGCAACTCATCAGAGCCAAGAATATAAAAACCATTGGGGA TTTGAGTACGCTTACGGCATCTGAAATAAAAACTCTGCCTATCCGTTCTCCAAAGGTGTTTAATGTAAAA AAGGCCCTCAGAGTATACCATGAGCAACAGATGAAATCTCGTGGACTTGAAGAAATTCCAATTTTTGATA TTTCTGAGAAGGCAGTAAATGGAGTGGAGAGCAGGACTGTCTCCACGGATGAAGAAAGGTTCGCCTCAGA TTTGATTGAACCTGTGACCCTAGATACCCCATTGTCTAAAAATCTTGTGGCACAAATTAGTGCTCTTGCT CTTCAACTGGACTCAGAAGATCTCTACAGTTACACTGGAAGCCAGCTATTTGAAATGCATGAAAAACTTG GTACCATGGCAAACTCTATAATAAGAAATCTACAGTCACGTTGGAGATCACCAGCCCATGAAAATTCTTA G
Translation (2426 aa): MTAPGRSPLEPLLETWEDPSVPPGEQTDAYLTLTSRMTGEEGKEVIAEIEKNLSRLYTVLKAHISSQNSE LSSAALQALGFCLYNPRITSGLSEANIQELLLTLNGIIKSSDKNVCTRALWVISKQTFPAELVSKMVSSI IDSLEVILSKGEIHSAVVDFEALNVIISHWFLHCRLIEQAPVQMGEESVRWAKLVIPLVVHSAQKVHLRG ATALEMGMPLLLQKQQEIALITEHLMTTKLISELQKLFKNKNETYVLKLWPLFVKLLGKTLHRSGSFINS LLQLEELGFRSGTPMIKKIAFIAWKSLIDNFALNPDILCSAKRLKLLMQPLSSIHVRTETLALTKLEVWW YLLMRLGPQLPANFEQVCVPLIQSTISVDSIPSPQGNSSRGSASPGLSPLTPGHKGASPYGSPRGNLSSN TGGMAAIPSIQLLGLEMMLHFLLGPEVLSFAKQHKIVLSLEPLEHPLISSPSFFSKYAHTLITAVHDSFV SVGKDASDAVVSAIWKELISLVKSVTEAGNRKEKSGSEVLTLLLKSLENIVKSEVFPVSKTLVLMEITVK GLPPKVLGSPAYQVANMDILNGTPALFLIQLIFNNNLLECGVEDEKFFLNLETLVGCVLSGPTSPLAFSD SVLTVINQNAKQLVNKEHLWRMWSMIVSPLTDVIHQTNEVNQGDALEHNFSAIYGALTLPINHIFSAQTF PTGTMKALLKTWSELYRAFTRCASLVATAEENLCCEELSSKIMCSLEDEVLSDLLFLDRISHIIIVMVDC IDFSPYNKKYQPKIKSPQRSSDWSRKKKEPLGKLASLFKLIVKVIDTFHTLSLKETFSDTLLAIGNSIIS MLSNVFGHISLPSMIREIFATFTRPLALLYENSKLDEAPKVYTSLNNKLEKLLGEIVACLQFSYLGAYDS ELLEHLSPLLCVIFLHKNKQIRKQSALLWNATFAKATALVYPEELKPILRQAKQKILLLLPGLENVEMMD ESSEPYSESTENSQLNVKISGMERKSSGKRDSILAHTKDKKKKVKLSAKLKLESSSPKIKSGKLLEEEKS TDFVFIPPEGKETKARVLTEHQKEVLKTKRCDIPALYNNLDASQDTLFSAQFSQEESMESLTLTEKPKED AKIIKEEQMESTIFIHQDAPENCGIDEHSENASLPNCGGSVAETNPETLITGFDARKEVLISSKILSAES SSSTETSVVSSSSVSNATFSGTPPQPTSRRQTFITLEKFDGSETRPFSPSPLNNISSTVTVRNNQDNTTN TDMPPKARKREVTNSKSDSENLANAGKKSSRRWSKAEQSVTKKSKPSLTSEQEEHSSENNSPDLLSPTEH VSENDDHPSEATLEHKDGDPKPAVENASLEDLTTEEKNVGINMESKESTASVVARTEQIVNEDSQAAALA PNPKTLRRSSRRRSEAVDSCSDSQERESGQQKKERRKEEEKIISKSPLRIKDDKLPTQKLTDESPIQENL TEKGNTLPERTSGEPSVNAEIDQNRRKPDLENVSSEGGGGTLDNLDKSSEKPLRGRTRYQTRRASQGLIS AVENSESDSSEAKEEVSRKKRSGKWKNRSSDSVDIEEQEEKKAEEEVMKTANQTLDGQAVPDVDVNAAAQ VCEKSTNNNRVILQDSAGPADSLQAPPKGEEKSKINKCVDSSFVSLPVPESNLRTRNASKRLLYKQDNDS NVRVSDSSLSPEKFTQVECQHKRSRRVRRSKSCDCCGEKSQSQEKSFIGLKNTESYAIKSVEKKKTDLQV PETAPETREARDHAETKLAGEEPLVNFHVGLKEENCTTGDSVKSEAELQEASLPPEIVTVKEKTYDTDAS EAVSEIQGPCSENHSPAEDPGLSECKDISQKQLSENGELDISDVGKACKVIAGSSPEGVETMELNVRNDA FVAADSEKSTQMDVSVDVATEEDNKKDECEAVTTEVNVEGVATEDFNSGMDLSDTPIPVSKDVETEHAAS GEIEGESNESDSGSCEEMNKEMGSHKAQMSTEIDSARVKETDILASASKSEEALIGRLDVNTQSFVSDIE MSSGERTVNCKTETSIELNKLDEAKLSGNEATVGNDTLQEVCFTSEKVEKLPQCLLVQVASELGAESNTT SPEKLELDSFGSVNESPSGMQQARCVWSPLASPSTSILKRGLKRSQEDEISPVNKIRRVSFADPIYQAGL ADDIDRRCSVVRSHSSNSSPIIKSVKTSPTSHSKHNTTSAKGFLSPGSQSSKFKSPKKCLITEMAQESML SPTESVYPALVNCAASVDIILPQITSNMWARGLGQLIRAKNIKTIGDLSTLTASEIKTLPIRSPKVFNVK KALRVYHEQQMKSRGLEEIPIFDISEKAVNGVESRTVSTDEERFASDLIEPVTLDTPLSKNLVAQISALA LQLDSEDLYSYTGSQLFEMHEKLGTMANSIIRNLQSRWRSPAHENS
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