NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq

Report for CCDS89541.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
89541.1 Public Mus musculus 2 Mapkbp1 23 108 98 CCDS HistoryNCBI Gene:26390Re-query CCDS DB by CCDS ID:89541.1Re-query CCDS DB by GeneID:26390See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 23, NCBI annotation release 108, Ensembl annotation release 98

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 89541.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000229024.1 ENSMUSP00000155163.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000229024.1Link to Ensembl Protein Viewer:ENSMUSP00000155163.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000229024Re-query CCDS DB by Protein ID:ENSMUSP00000155163
Original member NCBI NM_001355293.1 NP_001342222.1 Updated not alive Link to Nucleotide Sequence:NM_001355293.1Link to Protein Sequence:NP_001342222.1Re-query CCDS DB by Nucleotide ID:NM_001355293Re-query CCDS DB by Protein ID:NP_001342222
Current member NCBI NM_001355293.2 NP_001342222.1 Accepted alive Link to Nucleotide Sequence:NM_001355293.2Link to Protein Sequence:NP_001342222.1Re-query CCDS DB by Nucleotide ID:NM_001355293Re-query CCDS DB by Protein ID:NP_001342222Link to BLAST:NP_001342222.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001342222.1 1509 Q6NS57-2 1509 99.9337% 0 1

Chromosomal Locations for CCDS 89541.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 2 (NC_000068.7)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 119973052 119973168 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 119998482 119998573 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 120010743 120010805 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 120011002 120011059 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 120011933 120012103 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 120012593 120012730 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 120012912 120013094 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 120013301 120013318 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 120013619 120013779 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 120014623 120014812 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 120015343 120015489 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 120015693 120015868 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 120016780 120016871 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 120017140 120017265 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 120017581 120017651 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 120017756 120017877 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 120018299 120018374 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 120018488 120018599 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 120018922 120018985 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 120019226 120019360 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 120019552 120019688 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 120019878 120019933 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 120021084 120021320 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 120021731 120021897 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 120022090 120022235 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 120022337 120022531 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 120022696 120022780 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 120023032 120023315 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 120023543 120024139 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 120024518 120024603 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 120025104 120025331 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (4530 nt):
ATGATGGCTGGAGAAGGGTCAACCATTACTAGCCGTATCAAGAACTTGCTGAGGTCTCCATCCATCAAAT
TACGCAGAAGTAAAGCAGGAAACCGGAGAGAGGACCTCAGCTCCAAGGTAACCTTGGAGAAGGTCCTGGG
AGTAACAGTATCTGGAGGAAGAGGACTTGCTTGTGACCCCCGATCTGGCTTAGTTGCCTACCCAGCAGGG
TGTGTGGTCGTCCTCTTCAATCCCCGGAAGCACAAACAGCACCACATCCTCAACAGCTCCAGGAAAACCA
TTACTGCCCTTGCCTTCTCCCCTGATGGCAAGTACTTGGTCACTGGAGAGAGTGGGCACATGCCTGCCGT
GCGGGTTTGGGATGTGGCTGAACGTAGCCAGGTGGCAGAGCTACAGGAGCATAAGTATGGTGTGGCTTGT
GTGGCTTTCTCCCCAAGTGCCAAGTACATTGTGTCTGTGGGCTACCAGCATGACATGATTGTCAACGTGT
GGGCCTGGAAGAAAAACATTGTAGTGGCCTCCAACAAAGTATCCAGTCGGGTAACCGCAGTGTCCTTTTC
TGAAGACTGCAGCTACTTTGTCACTGCAGGCAACCGGCACATCAAATTCTGGTACCTGGATGACAGTAAG
ACCTCAAAGGTGAACGCCACTGTGCCCCTGCTGGGCCGCTCGGGGCTGCTGGGGGAGCTGAGGAACAACC
TGTTCACTGATGTGGCCTGTGGCCGAGGGGAAAAGGCTGATAGCACTTTCTGTATCACGTCGTCGGGGCT
GCTGTGCGAGTTCAGCGATCGCAGGCTTCTGGACAAATGGGTGGAGCTAAGGAACACAGACAGCTTCACA
ACCACTGTGGCCCACTGCATCTCTGTCACCCAAGAATACATCTTCTGTGGCTGTGCTGATGGCACGGTGC
GCCTTTTCAATCCTTCCAACCTGCACTTCCTCAGTACCCTACCTAGACCCCATGCTCTTGGAACAGACAT
TGCCAGCATCACTGAGGCCAGTCGCCTCTTTTCTGGAGGGGTCAATGCAAGGTACCCAGACACCATTGCC
TTGACCTTCGATCCAACTAATCAGTGGCTATCTTGTGTATACAACGACCACAGCATATATGTTTGGGATG
TGAGGGACCCCAAGAAAGTGGGGAAGGTGTACTCCGCTCTGTATCACTCCTCCTGTGTCTGGAGTGTGGA
GGTCTACCCTGAGATCAAGGACAGTCACCAGGCCTGTCTTCCCCCCAGTTCCTTTATTACTTGCTCCTCA
GACAACACCATCCGCCTGTGGAACACAGAGAGCTCTGGGGTACATGGCTCTACCCTGCACCGTAACATCC
TCAGCAATGATCTCATTAAGATCATCTATGTGGATGGGAACACTCAGGCTTTGTTGGACACTGAGCTGCC
TGGAGGAGACAAAGCTGATGGGTCGCTGATGGACCCCCGAGTGGGCATCCGGTCCGTGTGTATTAGCCCC
AATGGACAGCACCTGGCCTCCGGAGACCGCATGGGGACACTTAGGATACATGAACTGCAGTCCCTGAGTG
AGATGCTGAAAGTGGAGGCCCACGACTCTGAGATCTTGTGCCTGGAGTACTCTAAGCCAGACACAGGTTT
GAAACTGCTAGCATCGGCAAGCCGGGACCGTCTGATCCACGTGCTGGATGCTGGCCGGGAATATAGTCTA
CAGCAGACACTGGATGAGCATTCATCTTCCATCACTGCTGTCAAGTTTGCAGCCAGTGATGGGCAAGTGC
GAATGATCAGCTGTGGTGCAGACAAGAGCATTTACTTCCGAACTGCACAGAAGTCTGGAGAAGGAGTACA
GTTTACACGAACGCACCACGTGGTACGGAAGACAACTCTCTATGACATGGACGTGGAGCCCAGCTGGAAG
TACACGGCCATCGGCTGCCAAGACCGGAATATTCGGATCTTTAACATTAGCAGCGGAAAGCAGAAAAAGC
TGTTTAAAGGGTCACAGGGTGAAGATGGCACTCTCATTAAGGTGCAGACAGACCCCTCAGGGATCTACAT
TGCCACTAGCTGTTCCGATAAGAATCTCTCCATTTTTGACTTCTCCTCAGGCGAGTGTGTGGCCACCATG
TTTGGCCACTCAGAGATTGTCACTGGCATGAAATTTAGTAACGATTGCAAACATCTCATCTCTGTGTCAG
GGGACAGCTGCATCTTTGTCTGGCGTCTGAGCTCTGAGATGACCATCAGCATGAGGCAGCGCTTGGCTGA
GCTGCGGCAGCGCCAGCGAGGGATCAAGCAGCAAGGACCAACCTCTCCCCAGAGGGCTTCTGGAGCCAAG
CAGCACCATGCTCCAGTGGTACCCCCTTCTGGACCAGCTCTTTCCTCAGACAGTGACAAGGAGGGAGAAG
ATGAGGGTACTGAAGAAGAAGAACTGCCAGCTCTGCCCATCCTTAGCAAGAGCACCAAGAAAGAACTAGC
CTCAGGCTCTAGTCCAGCCTTGCTCCGAAGCCTGTCCCACTGGGAAATGAGTCGGGCACAAGAGACCATG
GAGTACCTGGACCCAGCTCCTGTAGCTAACACAGGACCTAAAAGAAGAGGGCGCTGGGCTCAGCCAGGCG
TGGAGCTGAGTGTTCGCTCCATGTTGGACCTGAGACAGATAGAGACCTTAGCCCCAAGCCCTCGAGGCCC
CAGCCAGGACTCACTGGCTGTGTCCCCAGCTGGTCCTGGGAAGCATGGTCCACAGGGCCCTGAGCTGTCA
TGTGTCAGTCAGAATGAAAGGGCCCCTCGGCTTCAGACCTCCCAACCCTGCTCCTGCCCCCACATTATCC
AATTGTTGTCACAAGAGGAAGGAGTCTTTGCCCAAGATCTGGAGCCTGCACCCATTGAAGATGGTATTGT
CTACCCGGAACCCAGTGACAGCCCTACCATGGATACCAGTGCGTTTCAGGTGCAGGCTCCAACCGGAGGA
TCCCTAGGAAGAATGTACCCAGGCAGCAGGGGCTCAGAAAAGCACAGTCCTGACAGTGCATGCTCTGTGG
ATTACAGCAGCAGCCGGCTTTCCAGCCCTGAACACCCTAATGAAGACTCTGAGAGCACAGAGCCCCTAAG
TGTGGATGGCATCTCCTCAGACCTGGAAGAGCCAGCCGAGGGTGATGAAGACGAGGAAGAAGAGGGAGGC
ACTGGCCTCTGTGGGCTACAAGAAGGCGGCCCTCATACCCCAGATCAGGAACAGTTTCTAAAACAGCACT
TTGAGACTCTGGCCAATGGGACTGCTCCAGGGGGCCCAGCACGGGTGCTAGAGAGGACAGAGTCTCAGAG
CATCTCATCACGATTCCTTCTGCAAGTGCAGACCTCCCCACTCAGGGAACCATCCCTATCCTCCTCAGGC
TTGGCCCTGACGTCCAGACCTGACCAGGTATCACAGGTGTCTGGTGAGCAGCTGAAAGGCAGTGGTGCCA
CTCCTCCAGGAGCACCCCCAGAAATGGAACCCTCTTCTGGCAACTCTGGCCCCAAGCAGGTGGCTCCTGT
GCTGTTGACACGACGGCATAACAACTTGGACAACAGCTGGGCCTCCAAGAAAATGGCTGCAACCCGGCCT
TTAGCTGGACTCCAGAAAGCCCAGTCTGTGCATAGTTTGGTACCACAGGATGAGGTGCCTTCATCACGTC
CACTGCTCTTCCAGGAGGCAGAGACCCAGGGCAGCTTAGGATCCCTGCCACAAGCTGGTGGCTGCTCATC
TCAGCCCCACTCCTACCAGAACCACACCACCAGTTCTATGGCCAAGCTAGCGCGTAGTATTTCTGTTGGC
GAGAATCCGGGCCTGGCAACTGAACCTCAAGCTCCTGTACCGATCCGAATCTCACCATTCAACAAACTAG
CTCTGCCTAGCAGGGCTCACCTTGTCCTGGACATCCCCAAACCACTTCCTGACCGTCCTACTCTGACCAC
ATTCTCACCTGTATCCAAGGGCCTGGCCCACAATGAAACAGAACAATCGGGCCCCTTGGTGAGCCTAGGA
AAGGCTCATACTACAGTTGAAAAGCACTCCTGTTTAGGGGAGGGTACTACTCATAAATCTAGGACAGAGT
GCCAGGCTTATCCTGGACCCAACCACCCCTGTGCCCAGCAACTGCCAGTCAACAACCTTCTCCAAGGCCC
TGAGAGCTTGCAGCCCCTGTCCCCTGAGAAGACTCGTAACCCAGTGGAAAGCAGCAGGCCAGGGGTAGCC
CTGAGCCAGGACTCAGAACTGGCCTTGAGTCTGCAACAGTGTGAACAGCTCGTGGCAGAGCTCCAGGGGA
ATGTACGCCAGGCAGTGGAGCTCTACCGAGCGGTGACCAGCTATAAGACACCTTCGGCAGAGCAAAGTCA
CATCACCCGTCTCCTGAGAGACACCTTCTCTTCGGTGCGACAGGAGCTCGAGGTTCTGGCTGGGGCGGTG
CTGTCCAGCCCAGGTGGCAGCCCTGGGGCTGTGGGGGCTGAGCAGACGCAGGCCCTGTTGGAGCAATACT
CCGAGCTACTGCTAAGAGCTGTGGAGCGGCGCATGGAGCGTAGACTCTGA

Translation (1509 aa):
MMAGEGSTITSRIKNLLRSPSIKLRRSKAGNRREDLSSKVTLEKVLGVTVSGGRGLACDPRSGLVAYPAG
CVVVLFNPRKHKQHHILNSSRKTITALAFSPDGKYLVTGESGHMPAVRVWDVAERSQVAELQEHKYGVAC
VAFSPSAKYIVSVGYQHDMIVNVWAWKKNIVVASNKVSSRVTAVSFSEDCSYFVTAGNRHIKFWYLDDSK
TSKVNATVPLLGRSGLLGELRNNLFTDVACGRGEKADSTFCITSSGLLCEFSDRRLLDKWVELRNTDSFT
TTVAHCISVTQEYIFCGCADGTVRLFNPSNLHFLSTLPRPHALGTDIASITEASRLFSGGVNARYPDTIA
LTFDPTNQWLSCVYNDHSIYVWDVRDPKKVGKVYSALYHSSCVWSVEVYPEIKDSHQACLPPSSFITCSS
DNTIRLWNTESSGVHGSTLHRNILSNDLIKIIYVDGNTQALLDTELPGGDKADGSLMDPRVGIRSVCISP
NGQHLASGDRMGTLRIHELQSLSEMLKVEAHDSEILCLEYSKPDTGLKLLASASRDRLIHVLDAGREYSL
QQTLDEHSSSITAVKFAASDGQVRMISCGADKSIYFRTAQKSGEGVQFTRTHHVVRKTTLYDMDVEPSWK
YTAIGCQDRNIRIFNISSGKQKKLFKGSQGEDGTLIKVQTDPSGIYIATSCSDKNLSIFDFSSGECVATM
FGHSEIVTGMKFSNDCKHLISVSGDSCIFVWRLSSEMTISMRQRLAELRQRQRGIKQQGPTSPQRASGAK
QHHAPVVPPSGPALSSDSDKEGEDEGTEEEELPALPILSKSTKKELASGSSPALLRSLSHWEMSRAQETM
EYLDPAPVANTGPKRRGRWAQPGVELSVRSMLDLRQIETLAPSPRGPSQDSLAVSPAGPGKHGPQGPELS
CVSQNERAPRLQTSQPCSCPHIIQLLSQEEGVFAQDLEPAPIEDGIVYPEPSDSPTMDTSAFQVQAPTGG
SLGRMYPGSRGSEKHSPDSACSVDYSSSRLSSPEHPNEDSESTEPLSVDGISSDLEEPAEGDEDEEEEGG
TGLCGLQEGGPHTPDQEQFLKQHFETLANGTAPGGPARVLERTESQSISSRFLLQVQTSPLREPSLSSSG
LALTSRPDQVSQVSGEQLKGSGATPPGAPPEMEPSSGNSGPKQVAPVLLTRRHNNLDNSWASKKMAATRP
LAGLQKAQSVHSLVPQDEVPSSRPLLFQEAETQGSLGSLPQAGGCSSQPHSYQNHTTSSMAKLARSISVG
ENPGLATEPQAPVPIRISPFNKLALPSRAHLVLDIPKPLPDRPTLTTFSPVSKGLAHNETEQSGPLVSLG
KAHTTVEKHSCLGEGTTHKSRTECQAYPGPNHPCAQQLPVNNLLQGPESLQPLSPEKTRNPVESSRPGVA
LSQDSELALSLQQCEQLVAELQGNVRQAVELYRAVTSYKTPSAEQSHITRLLRDTFSSVRQELEVLAGAV
LSSPGGSPGAVGAEQTQALLEQYSELLLRAVERRMERRL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH