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Report for CCDS21010.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
21010.1 Public Mus musculus 7 Cyp2f2 23 108 98 CCDS HistoryNCBI Gene:13107Re-query CCDS DB by CCDS ID:21010.1Re-query CCDS DB by GeneID:13107See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 21010.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000003100.9 ENSMUSP00000003100.8 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000003100.9Link to Ensembl Protein Viewer:ENSMUSP00000003100.8Re-query CCDS DB by Nucleotide ID:ENSMUST00000003100Re-query CCDS DB by Protein ID:ENSMUSP00000003100
Original member NCBI NM_007817.2 NP_031843.2 Updated not alive Link to Nucleotide Sequence:NM_007817.2Link to Protein Sequence:NP_031843.2Re-query CCDS DB by Nucleotide ID:NM_007817Re-query CCDS DB by Protein ID:NP_031843
Current member NCBI NM_007817.3 NP_031843.2 Accepted alive Link to Nucleotide Sequence:NM_007817.3Link to Protein Sequence:NP_031843.2Re-query CCDS DB by Nucleotide ID:NM_007817Re-query CCDS DB by Protein ID:NP_031843Link to BLAST:NP_031843.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_031843.2 491 P33267 491 100% 0 0

Chromosomal Locations for CCDS 21010.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 27121571 27121741 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 27121835 27121997 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 27124854 27125003 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 27129191 27129351 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 27129717 27129893 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 27130294 27130435 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 27131170 27131357 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 27132474 27132615 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 27133216 27133397 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1476 nt):
ATGGATGGTGTGAGCACAGCCATCTTGCTTCTCCTCCTGGCTGTCATCTCTCTGTCCCTGACCTTCAGCT
CACGGGGCAAGGGCCAGCTGCCTCCAGGACCCAAACCTCTCCCAATCCTGGGAAACCTGCTGCAGCTTCG
CTCCCAAGACTTGCTGACCTCCCTCACCAAGCTTAGCAAGGAGTATGGGTCGGTGTTCACGGTGTACCTG
GGGTCCAGGCCTGTGATAGTCCTCAGCGGATACCAAACTGTGAAGGAGGCTCTTGTGGACAAAGGGGAGG
AGTTCAGTGGCCGAGGCGCATACCCCGTCTTTTTCAACTTCACCAGGGGCAACGGCATCGCCTTCTCCGA
TGGAGAGCGCTGGAAGATCCTCAGAAGGTTCTCTGTCCAAATCCTGCGGAACTTTGGCATGGGAAAAAGA
AGCATCGAGGAGCGGATCCTGGAAGAAGGCAGCTTCCTGCTGGAGGTGCTGAGGAAAATGGAAGGCAAGC
CCTTTGACCCCGTGTTTATCCTGAGCCGCTCTGTGTCCAACATTATCTGCTCTGTCGTCTTCGGAAGTCG
CTTCGACTATGACGATGAGCGTCTGCTCACCATCATCCACTTTATCAATGACAACTTCAAGATTATGAGC
AGCCCTTGGGGCGAGATGTACAACATCTTCCCAAGTGTCCTTGATTGGATACCTGGGCCACACAAACGCT
TGTTCCGGAACTTTGGAGGCATGAAAGATCTCATTGCCCGCAGCGTCCGCGAACACCAGGATTCCCTGGA
CCCCAACTCTCCCCGGGACTTCATCGACTGCTTCCTCACAAAGATGGCACAGGAGAAGCAAGACCCACTG
AGCCACTTCAATATGGATACCCTGCTGATGACCACACACAACCTGCTCTTCGGTGGCACAGAAACCGTGG
GCACCACACTGCGTCACGCCTTCCTTATTCTTATGAAATACCCCAAAGTGCAAGCCCGCGTGCAGGAAGA
GATTGACCGTGTGGTGGGGCGCTCGCGGATGCCGACGCTGGAAGACCGTACATCCATGCCTTACACAGAT
GCAGTGATCCACGAAGTGCAACGCTTTGCTGACGTCATCCCCATGAACCTGCCTCACCGTGTCACTCGGG
ACACACCTTTCCGGGGCTTCCTGATACCCAAGGGCACAGATGTCATCACACTCCTTAACACTGTGCACTA
CGACTCGGACCAGTTCAAGACGCCTCAGGAGTTCAATCCTGAACATTTTCTGGACGACAATCATTCTTTC
AAAAAGAGCCCCGCCTTCATGCCATTTTCGGCTGGACGTCGACTGTGTCTGGGAGAGCCACTGGCGCGCA
TGGAGCTCTTCATATACTTCACCTCCATTCTGCAGAACTTCACATTGCAGCCGCTGGTGGATCCTGAGGA
CATCGACCTGACCCCGCTCAGCTCAGGGCTGGGCAATTTGCCAAGGCCTTTCCAGCTGTGTATGCACATT
CGCTGA

Translation (491 aa):
MDGVSTAILLLLLAVISLSLTFSSRGKGQLPPGPKPLPILGNLLQLRSQDLLTSLTKLSKEYGSVFTVYL
GSRPVIVLSGYQTVKEALVDKGEEFSGRGAYPVFFNFTRGNGIAFSDGERWKILRRFSVQILRNFGMGKR
SIEERILEEGSFLLEVLRKMEGKPFDPVFILSRSVSNIICSVVFGSRFDYDDERLLTIIHFINDNFKIMS
SPWGEMYNIFPSVLDWIPGPHKRLFRNFGGMKDLIARSVREHQDSLDPNSPRDFIDCFLTKMAQEKQDPL
SHFNMDTLLMTTHNLLFGGTETVGTTLRHAFLILMKYPKVQARVQEEIDRVVGRSRMPTLEDRTSMPYTD
AVIHEVQRFADVIPMNLPHRVTRDTPFRGFLIPKGTDVITLLNTVHYDSDQFKTPQEFNPEHFLDDNHSF
KKSPAFMPFSAGRRLCLGEPLARMELFIYFTSILQNFTLQPLVDPEDIDLTPLSSGLGNLPRPFQLCMHI
R


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
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