NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq

Report for CCDS37156.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
37156.1 Public Mus musculus 15 Cenpm 23 108 98 CCDS HistoryNCBI Gene:66570Re-query CCDS DB by CCDS ID:37156.1Re-query CCDS DB by GeneID:66570See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 37156.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000089155.5 ENSMUSP00000086558.4 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000089155.5Link to Ensembl Protein Viewer:ENSMUSP00000086558.4Re-query CCDS DB by Nucleotide ID:ENSMUST00000089155Re-query CCDS DB by Protein ID:ENSMUSP00000086558
Original member Current member NCBI NM_178269.3 NP_840000.2 Accepted alive Link to Nucleotide Sequence:NM_178269.3Link to Protein Sequence:NP_840000.2Re-query CCDS DB by Nucleotide ID:NM_178269Re-query CCDS DB by Protein ID:NP_840000Link to BLAST:NP_840000.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_840000.2 168 Q9CQA0-2 168 100% 0 0

Chromosomal Locations for CCDS 37156.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 15 (NC_000081.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 82234313 82234509 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 82239879 82239958 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 82241327 82241419 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 82244133 82244212 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 82244623 82244679 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (507 nt):
ATGTCGGTGCTGAGGTCGATGGACAAGCTGCCCGACCTGAACAGGGCTACCGTCTTGCTGGTGAGCACCG
AGGATGCGCTTCTGCAGCAGCTGGCGGAGTCGATGCTCAAAGATGACTGTGCGTCCGAGCTGAGGGTCCA
CTTGGCCAACTCCCTCCCTCTGCCCTCCAATGTGAACCGGCCCCGAATTGACCTGATTGTGTTTGTGATT
AACCTGCACAGCAAATACAGTCTCCAGAAAGTGGAGGAGTTTCTGCAGCACGTGGACAGCAGCTTCTTCC
TGGGGAAAGTGTGCTTCCTTGTCACAGGGGGTGGAAAGCTTTCGTGCAGCCATGGCGCGGCGTCTGGTGC
GCATTCTGCAGATCTGCGCTGGCCATGTGCCAGGCGTCTCCGCGCTGAACCTGATGTCCTTGCTGCGGAG
CCCCGAGAACCCCCCATCCAAGGAGCTGTGAGCATTACTGCCCTCCACACGTTTGCTGCCAGTTCCAAAA
GCAGCCACTGTTGGTGA

Translation (168 aa):
MSVLRSMDKLPDLNRATVLLVSTEDALLQQLAESMLKDDCASELRVHLANSLPLPSNVNRPRIDLIVFVI
NLHSKYSLQKVEEFLQHVDSSFFLGKVCFLVTGGGKLSCSHGAASGAHSADLRWPCARRLRAEPDVLAAE
PREPPIQGAVSITALHTFAASSKSSHCW


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH