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Report for CCDS17136.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
17136.1 Public Mus musculus 2 Bmp7 23 108 98 CCDS HistoryNCBI Gene:12162Re-query CCDS DB by CCDS ID:17136.1See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 17136.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000009143.7 ENSMUSP00000009143.7 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000009143.7Link to Ensembl Protein Viewer:ENSMUSP00000009143.7Re-query CCDS DB by Nucleotide ID:ENSMUST00000009143Re-query CCDS DB by Protein ID:ENSMUSP00000009143
Original member Current member NCBI NM_007557.3 NP_031583.2 Accepted alive Link to Nucleotide Sequence:NM_007557.3Link to Protein Sequence:NP_031583.2Re-query CCDS DB by Nucleotide ID:NM_007557Re-query CCDS DB by Protein ID:NP_031583Link to BLAST:NP_031583.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_031583.2 430 P23359 430 100% 0 0

Chromosomal Locations for CCDS 17136.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 2 (NC_000068.7)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 172870137 172870286 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 172872872 172872982 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 172875215 172875291 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 172879326 172879523 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 172893448 172893596 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 172916467 172916659 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 172939655 172940069 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1293 nt):
ATGCACGTGCGCTCGCTGCGCGCTGCGGCGCCACACAGCTTCGTGGCGCTCTGGGCGCCTCTGTTCTTGC
TGCGCTCCGCCCTGGCCGATTTCAGCCTGGACAACGAGGTGCACTCCAGCTTCATCCACCGGCGCCTCCG
CAGCCAGGAGCGGCGGGAGATGCAGCGGGAGATCCTGTCCATCTTAGGGTTGCCCCATCGCCCGCGCCCG
CACCTCCAGGGAAAGCATAATTCGGCGCCCATGTTCATGTTGGACCTGTACAACGCCATGGCGGTGGAGG
AGAGCGGGCCGGACGGACAGGGCTTCTCCTACCCCTACAAGGCCGTCTTCAGTACCCAGGGCCCCCCTTT
AGCCAGCCTGCAGGACAGCCACTTCCTCACTGACGCCGACATGGTCATGAGCTTCGTCAACCTAGTGGAA
CATGACAAAGAATTCTTCCACCCTCGATACCACCATCGGGAGTTCCGGTTTGATCTTTCCAAGATCCCCG
AGGGCGAAGCGGTGACCGCAGCCGAATTCAGGATCTATAAGGACTACATCCGGGAGCGATTTGACAACGA
GACCTTCCAGATCACAGTCTATCAGGTGCTCCAGGAGCACTCAGGCAGGGAGTCGGACCTCTTCTTGCTG
GACAGCCGCACCATCTGGGCTTCTGAGGAGGGCTGGTTGGTGTTTGATATCACAGCCACCAGCAACCACT
GGGTGGTCAACCCTCGGCACAACCTGGGCTTACAGCTCTCTGTGGAGACCCTGGATGGGCAGAGCATCAA
CCCCAAGTTGGCAGGCCTGATTGGACGGCATGGACCCCAGAACAAGCAACCCTTCATGGTGGCCTTCTTC
AAGGCCACGGAAGTCCATCTCCGTAGTATCCGGTCCACGGGGGGCAAGCAGCGCAGCCAGAATCGCTCCA
AGACGCCAAAGAACCAAGAGGCCCTGAGGATGGCCAGTGTGGCAGAAAACAGCAGCAGTGACCAGAGGCA
GGCCTGCAAGAAACATGAGCTGTACGTCAGCTTCCGAGACCTTGGCTGGCAGGACTGGATCATTGCACCT
GAAGGCTATGCTGCCTACTACTGTGAGGGAGAGTGCGCCTTCCCTCTGAACTCCTACATGAACGCCACCA
ACCACGCCATCGTCCAGACACTGGTTCACTTCATCAACCCAGACACAGTACCCAAGCCCTGCTGTGCGCC
CACCCAGCTCAACGCCATCTCTGTCCTCTACTTCGACGACAGCTCTAATGTCATCCTGAAGAAGTACAGA
AACATGGTGGTCCGGGCCTGTGGCTGCCACTAG

Translation (430 aa):
MHVRSLRAAAPHSFVALWAPLFLLRSALADFSLDNEVHSSFIHRRLRSQERREMQREILSILGLPHRPRP
HLQGKHNSAPMFMLDLYNAMAVEESGPDGQGFSYPYKAVFSTQGPPLASLQDSHFLTDADMVMSFVNLVE
HDKEFFHPRYHHREFRFDLSKIPEGEAVTAAEFRIYKDYIRERFDNETFQITVYQVLQEHSGRESDLFLL
DSRTIWASEEGWLVFDITATSNHWVVNPRHNLGLQLSVETLDGQSINPKLAGLIGRHGPQNKQPFMVAFF
KATEVHLRSIRSTGGKQRSQNRSKTPKNQEALRMASVAENSSSDQRQACKKHELYVSFRDLGWQDWIIAP
EGYAAYYCEGECAFPLNSYMNATNHAIVQTLVHFINPDTVPKPCCAPTQLNAISVLYFDDSSNVILKKYR
NMVVRACGCH


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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