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Report for CCDS20914.2 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
20914.2 Public Mus musculus 7 Bcl3 23 108 98 CCDS HistoryNCBI Gene:12051Re-query CCDS DB by CCDS ID:20914.2See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq, Havana and CCDS collaboration)

Sequence IDs included in CCDS 20914.2

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000120537.7 ENSMUSP00000113851.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000120537.7Link to Ensembl Protein Viewer:ENSMUSP00000113851.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000120537Re-query CCDS DB by Protein ID:ENSMUSP00000113851
Original member Current member NCBI NM_033601.3 NP_291079.2 Accepted alive Link to Nucleotide Sequence:NM_033601.3Link to Protein Sequence:NP_291079.2Re-query CCDS DB by Nucleotide ID:NM_033601Re-query CCDS DB by Protein ID:NP_291079Link to BLAST:NP_291079.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_291079.2 448 Q9Z2F6 448 100% 0 0

Chromosomal Locations for CCDS 20914.2

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 19808872 19809056 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 19809142 19809259 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 19809496 19809663 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 19811057 19811134 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 19811320 19811408 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 19811495 19811699 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 19812405 19812513 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 19820047 19820200 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 19822437 19822677 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1347 nt):
ATGCCCCGATGCCCCGCGGGGGCCATGGACGAGGGGCCCGTGGACCTGCGCACCCGGCCCAAGGGCACCC
CGGGCGCCGCGCTGCCACTCCGCAAACGCCCGCTGCGCCCCGCGTCCCCAGAGCCCGCAACCACGCGCAG
CCCCGCTGGACCCCTGGACGCCCTGCGCAGCGGCTGCGACGTCCCGGTTGTCCCTGGGCCCCCCCACTGT
GTGGCCAGGCCGGAGGCCCTTTACTACCAGGGACCTTTGATGCCCATTTACTCTACCCCGACGATGGCCC
CCCACTTTCCGCTGCTGAACCTGCCTACTCACCCCTACTCCATGATATGCCCCATGGAACACCCCCTTTC
AGCTGATATTGCCATGGCCACTCGGGTGGATGAGGATGGAGACACGCCTCTCCACATCGCTGTGGTCCAG
AATAACATAGCCGCTGTCTACCGAATACTCAGCCTTTTCAAGCTTGGGAGCCGCGAAGTAGACGTCCATA
ACAACCTGCGGCAGACCCCGCTCCACCTGGCTGTCATCACCACATTACCAGACATGGTCCGGCTCTTGGT
GACAGCTGGTGCCAGCCCCATGGCCCTGGATCGTCACGGCCAGACTGCAATTCACCTGGCATGCGAGCAC
CGCAGCCCCAGCTGCCTGCAGGCCCTGCTGGACAGCGCAACCTCAGGCTCCGTGGACCTGGAGGTTCGCA
ATTATGAAGGGCTCACTGCCCTGCACGTGGCCGTGAACACCGGGTGCCAGGAGGCTGTTCTGCTGCTCCT
GGAGCGTGGCGCGGACATCGATGCAGTGGATATCAAGAGCGGCCGCTCCCCACTCATCCACGCCGTGGAG
AACAACAGCCTGAACATGGTGCAACTCCTGCTGCTGCACGGCGCCAACGTGAACGCTCAGATGTATTCTG
GCAGCTCGGCTCTGCATTCTGCGTCTGGCCGCGGGCTTCTGCCTCTGGTGCGCACGCTGGTGCGCAGCGG
GGCTGACAGCGGCCTCAAGAACTGTCACAATGACACACCTCTCATGGTGGCGCGCAGCCGCAGGGTCATT
GATATCTTAAGGGGGAAGGCCTCTCGGGCTGCTTCAGGGTCACAGCCTGAGCCATCCCCAGACCAAAGTG
CCACCAACTCCCCCGAGAGCAGCAGTCGTCTCAGCTCCAATGGCCTCCAGTCCTCGCCAAGCTCCTCACC
CTCGCTGTCTCCCCCGAAAGATGCTCCTGGCTTCCCCGCGACTCCCCAAAACTTTTTCCTTCCCACAACA
TCTACACCTGCCTTCCTGCCCTTCCCAGGAGTCCTCCGAGGCCCTGGCCGGCCCGTACCCCCTTCCCCAG
CTCCAGGAAGCAGCTGA

Translation (448 aa):
MPRCPAGAMDEGPVDLRTRPKGTPGAALPLRKRPLRPASPEPATTRSPAGPLDALRSGCDVPVVPGPPHC
VARPEALYYQGPLMPIYSTPTMAPHFPLLNLPTHPYSMICPMEHPLSADIAMATRVDEDGDTPLHIAVVQ
NNIAAVYRILSLFKLGSREVDVHNNLRQTPLHLAVITTLPDMVRLLVTAGASPMALDRHGQTAIHLACEH
RSPSCLQALLDSATSGSVDLEVRNYEGLTALHVAVNTGCQEAVLLLLERGADIDAVDIKSGRSPLIHAVE
NNSLNMVQLLLLHGANVNAQMYSGSSALHSASGRGLLPLVRTLVRSGADSGLKNCHNDTPLMVARSRRVI
DILRGKASRAASGSQPEPSPDQSATNSPESSSRLSSNGLQSSPSSSPSLSPPKDAPGFPATPQNFFLPTT
STPAFLPFPGVLRGPGRPVPPSPAPGSS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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