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Report for CCDS20016.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
20016.1 Public Mus musculus 6 Klrg2 23 108 98 CCDS HistoryNCBI Gene:74253Re-query CCDS DB by CCDS ID:20016.1Re-query CCDS DB by GeneID:74253See the combined annotation on chromosome 6 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 20016.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000096030.6 ENSMUSP00000093732.3 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000096030.6Link to Ensembl Protein Viewer:ENSMUSP00000093732.3Re-query CCDS DB by Nucleotide ID:ENSMUST00000096030Re-query CCDS DB by Protein ID:ENSMUSP00000093732
Original member Current member NCBI NM_001033171.2 NP_001028343.2 Accepted alive Link to Nucleotide Sequence:NM_001033171.2Link to Protein Sequence:NP_001028343.2Re-query CCDS DB by Nucleotide ID:NM_001033171Re-query CCDS DB by Protein ID:NP_001028343Link to BLAST:NP_001028343.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001028343.2 387 Q3UM83 387 99.7416% 0 1

Chromosomal Locations for CCDS 20016.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 6 (NC_000072.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6See the combined annotation on chromosome 6 in Sequence Viewer

Chromosome Start Stop Links
6 38627605 38627725 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 38628085 38628188 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 38629764 38629909 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 38630281 38630382 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 38636376 38637066 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1164 nt):
ATGGAGCCGCCGCAGGTCCCGGCGGAGGCGCCCCAACCCAGGGCCTCCGAAGACAGCCCGAGGCCGGAGC
GGACCGGGTGGGAGGAGCCGGACGCGCAGCCCCAGGAGCTCCCGGAGAAGTCTCCGTCTCCAGCCCTGTC
CGGTTCCCCTCGCGTACCGCCGCTCAGTCTGGGCTACGGCGCCTTCCGCCGCCTGGGCTCGTGCAGCCGC
GAGCTGCCGTCTCCGAGCCCCTCGTGGGCCGAGCAGCCCCGGGATGGAGAGGCGGAGCTGGAGCCCTGGA
CGGCGTCAGGAGAGCCCGCACCCGCGTCCTGGGCGCCCGTGGAGCTGCAGGTGGACGTGCGCGTGAAGCC
CGTGGGCGCGGCTGGGGCTAGTCGCGCGCCCTCGCCTGCGCCGTCCACGCGCTTTCTCACCGTGCCAGTG
CCCGAATCGCCAGCCTTCGCCCGCCGCTCCGCTCCCACGCTCCAGTGGCTGCCCCGCGCCCCGTCACCAG
GCTCCACGTGGAGCCGAGGATCGCCGCTTGCCGCGAACGCCACCGAGTCTGTCAGCCCCGCTGAGGGTTG
CATGGTCCCCCCGGGCTCGCCCGCCTGCCGCTGCCGCTGCCGCGAGCCCGGACTGACCAAAGAAGATGAC
GCGCTGCTGCAGCGCGCAGGCATAGATGGCAAGAAACTGCCGCGGGCCATCACGCTCATAGGGCTGCCCC
AGTACATGAAGTCTCTGCGCTGGGCTCTGGTGGTCATGGCTGTGCTGCTGGCTGTCTGCACTGTAGCTGT
TGTGGCCCTGGCCTCTAGAGGAGGAACCAAGTGCCAACCATGCCCTCAAGGCTGGATGTGGTCTCAGGAA
CAATGCTACTACCTCTCTGAAGAAGCCCAAGACTGGGAGGGCAGCCAGGCATTCTGCTCAGCCCATCATG
CCACACTGCCTCTGCTGAGCCACACCCAGGACTTCTTAAGAAAATACCGGATCACCAAGGGCTCCTGGGT
GGGGGCCCGACGAGGCCCTGAAGGCTGGCACTGGACTGATGGGGTCCCTTTGCCATCCCAACTATTCCCA
GCAGACAGTGAGGACCACCCAGACTTCAGCTGTGGGGGTTTGGAAGAAGGCAGGCTCGTGGCTCTTGACT
GCAGTTCTCCTAGACCCTGGGTCTGTGCCAGAGAAACCAAATGA

Translation (387 aa):
MEPPQVPAEAPQPRASEDSPRPERTGWEEPDAQPQELPEKSPSPALSGSPRVPPLSLGYGAFRRLGSCSR
ELPSPSPSWAEQPRDGEAELEPWTASGEPAPASWAPVELQVDVRVKPVGAAGASRAPSPAPSTRFLTVPV
PESPAFARRSAPTLQWLPRAPSPGSTWSRGSPLAANATESVSPAEGCMVPPGSPACRCRCREPGLTKEDD
ALLQRAGIDGKKLPRAITLIGLPQYMKSLRWALVVMAVLLAVCTVAVVALASRGGTKCQPCPQGWMWSQE
QCYYLSEEAQDWEGSQAFCSAHHATLPLLSHTQDFLRKYRITKGSWVGARRGPEGWHWTDGVPLPSQLFP
ADSEDHPDFSCGGLEEGRLVALDCSSPRPWVCARETK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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