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Report for CCDS9074.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
9074.1 Public Homo sapiens 12 ACTR6 24 110 108 CCDS HistoryNCBI Gene:64431Re-query CCDS DB by CCDS ID:9074.1Re-query CCDS DB by GeneID:64431See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 9074.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000188312.7 ENSP00000188312.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000188312.7Link to Ensembl Protein Viewer:ENSP00000188312.2Re-query CCDS DB by Nucleotide ID:ENST00000188312Re-query CCDS DB by Protein ID:ENSP00000188312
Original member Current member NCBI NM_022496.5 NP_071941.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_022496.5Link to Protein Sequence:NP_071941.1Re-query CCDS DB by Nucleotide ID:NM_022496Re-query CCDS DB by Protein ID:NP_071941Link to BLAST:NP_071941.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_071941.1 396 Q9GZN1-1 396 100% 0 0

Chromosomal Locations for CCDS 9074.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 12 (NC_000012.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 100200852 100200919 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 100204940 100205057 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 100205676 100205744 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 100207663 100207786 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 100210073 100210208 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 100210295 100210351 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 100212256 100212354 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 100212450 100212528 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 100218415 100218586 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 100220008 100220146 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 100223786 100223915 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1191 nt):
ATGACGACCTTAGTGCTGGATAATGGAGCTTACAACGCCAAAATCGGTTACAGCCATGAAAATGTGTCGG
TTATTCCTAATTGTCAGTTCCGGTCAAAAACAGCACGTCTTAAAACTTTTACTGCCAACCAGATAGATGA
AATAAAAGACCCTTCTGGACTCTTTTACATCCTCCCTTTTCAAAAGGGCTACTTGGTGAATTGGGATGTT
CAGAGACAAGTTTGGGATTACCTTTTTGGAAAAGAAATGTATCAGGTTGATTTTTTAGATACTAATATTA
TTATCACTGAACCATACTTTAACTTCACTTCAATTCAAGAATCAATGAATGAAATTCTATTTGAAGAATA
CCAGTTTCAAGCAGTATTAAGAGTAAATGCTGGGGCTCTCAGTGCACATAGGTATTTCCGAGATAATCCT
TCCGAATTATGCTGTATCATTGTTGATAGTGGATATTCCTTTACACATATAGTTCCTTATTGTAGAAGTA
AAAAGAAAAAAGAAGCAATTATTCGGATAAATGTGGGAGGAAAACTCTTAACCAATCATCTAAAGGAGAT
CATATCTTACAGGCAGCTACATGTTATGGATGAAACACATGTGATTAATCAAGTGAAAGAAGATGTATGC
TATGTGTCTCAGGATTTTTATAGAGACATGGATATTGCAAAGTTGAAAGGAGAAGAAAATACAGTAATGA
TAGACTATGTCTTGCCTGACTTCAGTACAATTAAAAAGGGCTTTTGTAAGCCAAGGGAAGAGATGGTGTT
GAGTGGAAAATACAAATCTGGGGAACAAATTCTTCGTTTGGCCAATGAGAGATTTGCTGTTCCGGAAATA
CTCTTTAATCCTTCTGATATAGGCATTCAAGAAATGGGAATTCCAGAAGCTATTGTCTATTCAATTCAAA
ATCTACCTGAAGAAATGCAGCCGCATTTTTTTAAGAACATTGTCTTGACAGGAGGAAATTCCCTTTTCCC
AGGATTTAGGGATCGGGTTTACTCAGAAGTTCGATGTCTTACTCCAACAGATTATGATGTTTCTGTTGTG
CTGCCTGAAAACCCTATTACTTATGCCTGGGAAGGTGGAAAATTGATATCAGAGAATGATGATTTTGAAG
ATATGGTGGTAACAAGAGAAGATTACGAAGAAAATGGACATAGCGTCTGTGAAGAGAAATTTGATATTTA
A

Translation (396 aa):
MTTLVLDNGAYNAKIGYSHENVSVIPNCQFRSKTARLKTFTANQIDEIKDPSGLFYILPFQKGYLVNWDV
QRQVWDYLFGKEMYQVDFLDTNIIITEPYFNFTSIQESMNEILFEEYQFQAVLRVNAGALSAHRYFRDNP
SELCCIIVDSGYSFTHIVPYCRSKKKKEAIIRINVGGKLLTNHLKEIISYRQLHVMDETHVINQVKEDVC
YVSQDFYRDMDIAKLKGEENTVMIDYVLPDFSTIKKGFCKPREEMVLSGKYKSGEQILRLANERFAVPEI
LFNPSDIGIQEMGIPEAIVYSIQNLPEEMQPHFFKNIVLTGGNSLFPGFRDRVYSEVRCLTPTDYDVSVV
LPENPITYAWEGGKLISENDDFEDMVVTREDYEENGHSVCEEKFDI


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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