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Report for CCDS17825.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
17825.1 Public Mus musculus 3 Neurog2 23 108 98 CCDS HistoryNCBI Gene:11924Re-query CCDS DB by CCDS ID:17825.1See the combined annotation on chromosome 3 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 17825.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000029587.8 ENSMUSP00000029587.7 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000029587.8Link to Ensembl Protein Viewer:ENSMUSP00000029587.7Re-query CCDS DB by Nucleotide ID:ENSMUST00000029587Re-query CCDS DB by Protein ID:ENSMUSP00000029587
Original member NCBI NM_009718.3 NP_033848.1 Updated not alive Link to Nucleotide Sequence:NM_009718.3Link to Protein Sequence:NP_033848.1Re-query CCDS DB by Nucleotide ID:NM_009718Re-query CCDS DB by Protein ID:NP_033848
Current member NCBI NM_009718.4 NP_033848.1 Accepted alive Link to Nucleotide Sequence:NM_009718.4Link to Protein Sequence:NP_033848.1Re-query CCDS DB by Nucleotide ID:NM_009718Re-query CCDS DB by Protein ID:NP_033848Link to BLAST:NP_033848.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_033848.1 263 P70447 263 99.6198% 0 1

Chromosomal Locations for CCDS 17825.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 3 (NC_000069.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3See the combined annotation on chromosome 3 in Sequence Viewer

Chromosome Start Stop Links
3 127633729 127634520 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (792 nt):
ATGTTCGTCAAATCTGAGACTCTGGAGTTGAAGGAGGAAGAGGAGGTACTGATGCTGCTGGGCTCGGCTT
CCCCGGCCTCGGCGACCCTGACCCCGATGTCCTCCAGCGCGGACGAGGAGGAGGACGAGGAGCTGCGCCG
GCCGGGCTCCGCGCGTGGGCAGCGTGGAGCGGAAGCCGGGCAGGGGGTGCAGGGCAGTCCGGCGTCGGGT
GCCGGGGGTTGCCGGCCAGGGCGGCTGCTGGGCCTGATGCACGAGTGCAAGCGTCGCCCGTCGCGCTCAC
GGGCCGTCTCCCGAGGTGCCAAGACGGCGGAGACGGTGCAGCGCATCAAGAAGACCCGCAGGCTCAAGGC
CAACAACCGCGAGCGCAACCGCATGCACAACCTAAACGCCGCGCTGGACGCGCTGCGCGAGGTGCTGCCC
ACCTTCCCCGAGGATGCCAAGCTCACGAAGATCGAGACGCTGCGCTTCGCCCACAATTACATCTGGGCGC
TCACCGAGACTCTGCGCCTGGCGGACCACTGCGCCGGCGCCGGTGGCCTCCAGGGGGCGCTCTTCACGGA
GGCGGTGCTCCTGAGCCCGGGAGCTGCGCTCGGCGCCAGCGGGGACAGCCCTTCTCCACCTTCCTCCTGG
AGCTGCACCAACAGCCCGGCGTCATCCTCCAACTCCACGTCCCCATACAGCTGCACTTTATCGCCCGCTA
GCCCCGGGTCAGACGTGGACTACTGGCAGCCCCCACCTCCGGAGAAGCATCGTTATGCGCCTCACCTGCC
CCTCGCCAGGGACTGTATCTAG

Translation (263 aa):
MFVKSETLELKEEEEVLMLLGSASPASATLTPMSSSADEEEDEELRRPGSARGQRGAEAGQGVQGSPASG
AGGCRPGRLLGLMHECKRRPSRSRAVSRGAKTAETVQRIKKTRRLKANNRERNRMHNLNAALDALREVLP
TFPEDAKLTKIETLRFAHNYIWALTETLRLADHCAGAGGLQGALFTEAVLLSPGAALGASGDSPSPPSSW
SCTNSPASSSNSTSPYSCTLSPASPGSDVDYWQPPPPEKHRYAPHLPLARDCI


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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