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Report for CCDS25323.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
25323.1 Public Mus musculus 11 Mllt6 23 108 98 CCDS HistoryNCBI Gene:246198Re-query CCDS DB by CCDS ID:25323.1Re-query CCDS DB by GeneID:246198See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 25323.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000044730.11 ENSMUSP00000045445.5 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000044730.11Link to Ensembl Protein Viewer:ENSMUSP00000045445.5Re-query CCDS DB by Nucleotide ID:ENSMUST00000044730Re-query CCDS DB by Protein ID:ENSMUSP00000045445
Original member NCBI NM_139311.2 NP_647472.2 Updated not alive Link to Nucleotide Sequence:NM_139311.2Link to Protein Sequence:NP_647472.2Re-query CCDS DB by Nucleotide ID:NM_139311Re-query CCDS DB by Protein ID:NP_647472
Current member NCBI NM_139311.3 NP_647472.2 Accepted alive Link to Nucleotide Sequence:NM_139311.3Link to Protein Sequence:NP_647472.2Re-query CCDS DB by Nucleotide ID:NM_139311Re-query CCDS DB by Protein ID:NP_647472Link to BLAST:NP_647472.2

Chromosomal Locations for CCDS 25323.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 11 (NC_000077.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 97663572 97663680 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 97664955 97665034 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 97665486 97665540 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 97665730 97665839 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 97666790 97666893 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 97667075 97667168 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 97669424 97669636 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 97670253 97670351 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 97672457 97672592 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 97673460 97674071 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 97674438 97674619 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 97674774 97674882 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 97676139 97676205 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 97676370 97676512 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 97676862 97677059 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 97677148 97677236 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 97678314 97678663 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 97678965 97679055 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 97680470 97680826 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 97681546 97681587 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3240 nt):
ATGAAGGAGATGGTAGGAGGCTGCTGCGTATGTTCGGACGAGAGGGGCTGGGCCGAAAACCCGCTGGTCT
ACTGCGATGGGCACGCGTGCAGCGTGGCCGTCCACCAAGCTTGCTATGGCATCGTCCAGGTGCCAACAGG
ACCCTGGTTCTGCAGGAAATGTGAATCTCAGGAGCGTGCAGCCAGGGTGAGGTGTGAGCTGTGCCCGCAC
AAAGATGGGGCATTGAAGAGGACTGACAATGGAGGCTGGGCCCATGTGGTGTGCGCCCTCTACATCCCGG
AGGTGCAGTTCGCCAACGTGCTCACGATGGAGCCCATCGTTCTGCAGTACGTGCCTCATGATCGCTTCAA
CAAGACCTGTTACATCTGTGAGGAACAGGGCCGGGAGAGCAAAGCTGCCTCGGGAGCCTGCATGACCTGT
AACCGCCACGGATGCCGACAAGCTTTCCATGTCACCTGTGCCCAGATGGCTGGCCTGCTGTGTGAGGAAG
AAGTCCTGGAGGTGGACAACGTCAAGTACTGCGGCTACTGCAAATACCACTTCAGCAAGATGAAGACATC
CCGGCACTCCAGCGGGGGAGGAGGAGGAGCAGGAGGAGGCAGCAGCGGCGGGGGAGGAGGTGGCAGCAGT
AGTGCCAGCGGTGGTGGAGGTGGCACCGGGGGAGGCAGCGGCAACAGCTTCCTTAGCGGCAGGAGAAGCC
GGTCAGCCTCGCCATCCACCCAGCCGGAGAAGCACCCTACCCACCATGAGAAGGGCCAGAAGAAGAGTCG
AAAGGACAAAGAACGCCTTAAACAGAAGCACAAGAAGCGGCCTGAGTCCCCCCCCAGCGTCCTCGCCCCG
CCTGCGGTTCCCACTGCTGATAAGGTCTCCTCAGCGACTTCTTCCTCCCACCATGAGGCCAGCACTCAGG
AGACCTCTGAGAGTAGCAGGGACTCAAAGGGGAGAAAGTCTTCCAGCCATAGCCTGAGTCATAAGGACAA
GAAACTGGGCACTGGGAAAGGCTCGTCTCTGCAGAGCTCTCCTGACTTTGCAGCGTTCCCCAAGCTGGAA
CAGCCGGAGGAAGACAAATATCCCAAGCCTGCGGACCCCACCCCGCCGGCCCCTCCCTCGCCCACGGCCC
CTGAGCCCCCAAAGGCTGACCTCTTTGAACAGAAAGTTGTCTTCTCTGGCTTTGGGCCCATCATGCGCTT
CACCACCACCGCCTCCAGCTCCAGCCGGGCCCGAGCCCCTTCACCTGGAGACTATAAGTCTCCCCATATT
ACCGGGGCCGGGGCCTCAGCAGGCACCCACAAACGGATGCCCGCACTGAGTGCCACCCTTGGACCTGCTG
AGGAGGCCCCTGAGACCACCCTGAAGGAGAAGAAACACAAAGCCAGCAAAAGGAGCCGACACGGGCCAGG
CCGACCCAAAGGGAGCAGAGGCAAGGAGGGTGCTTCAGGCCCGACTGCCTCCCTCCCTGCGGCTCAGCTC
GCTGGCTTCACTGCCACTGCGGCCTCACCCTTCTCTGGGGGCTCCCTGGTCAGCGCTGGCCTGGGGGGTC
TGGCCTCCCGTACCTTTGGGCCTTCAGGAAGCTTGCCCAGCTTGAGCTTAGAGTCATCTCTGCTGGGGGC
AGGCATCTATACCAGTAATAAGGATCCCATCTCTCATGGTGGAGGGATGCTGCGGGCTGTCTGCAGCACC
CCACTCTCTTCCAGCCTGCTGGGGCCCACAGGAACCTCAGCCTTGCCGCGCCTCAGCCGGTCCCCCTTCA
CCAGCACCCTTGCATCCTCTTCTGCTTCCATCTCCACCACTCAGGTGTTTTCTCTGGCTGGCTCAACCTT
CAGCCTCCCTTCATCCCACATCTTTGGAACCCCCATGGGCACTGTTAACCCCCTCCTCACCCAAGCGGAG
AGCAGCCACACAGAGCCAGACCTAGAAGACTGCAGCTTCCGGTGTCACGGGACCTCCCCCCAGGAGAGTC
TCTCTTCCATGTCTCCCATCAGCAGCCTCCCTGCGCTCTTCGACCAGACGTCGGCGCCCTGTGCGGGTGG
CCAGTTAGACTCCACAGCCCCCGGGACAACCAACATGGAGCAGCTGCTGGAGAAGCAGGGTGACGGAGAG
GCTGGTGTCAACATTGTGGAGATGCTGAAGGCCCTGCATGCGCTGCAGAAGGAAAACCAGCGGCTGCAGG
AGCAGATCCTTAGCCTGACAGCGAAGAAGGAGCGGCTCCAAGTCCTCAACGTGCAGCTCTCCGTTCCCTT
CCCCGCCCTGCCTGCTGCCCTGCCGGCCACTAACGGCCCCATCCCAGGGCCCTATGGACTGCTTCCTCAA
GCTGGCAGCAGTGACTCCCTGAGCGTCAGCAAGAGCCCTCCCGGGAAGAACAGCCTCGGCCTGGACAATT
CCCTGTCCACCTCTTCCGAGGACCCACACTCAGGCTGCCCGAGCCGCAGCAGCTCTTCGCTCTCCTTCCA
CAGCACGCCCCCACCGCTGCCCCTGCTCCAGCAGAGCCCGGCTACTCTGCCCTTGGCCCTGCCTGGGGCT
CCTGCCCCACTCCCACCCCAGCCACAGAACGGGCTGGGCCGGGCGCCTGGAGCAACGGGGCTGGGAGCCA
TGCCCATGGCTGAGGGGCTGTTGGGTGGGCTGGCAGGCAGCGGGAGCCTGCCCCTCAATGGGCTTCTGGG
AGGGTTGAATGGGGCTGCTGCTCCCAACCCCGCGGGCTTGAGCCAGGCTGGCGGGGCCCCCACGCTTCAA
CTGCCAGGTTGTCTCAACAGCCTGACAGAGCAGCAGAGACACCTCCTTCAGCAGCAAGAGCAGCAGCTGC
AGCAACTGCAGCAGCTCCTGGCCTCTCCACAGCTGACCCCAGAGCACCAGACTGTGGTCTACCAGATGAT
CCAGCAGATGCAGCAGAAACGGGAGCTGCAGCGGCTACAGATGGCTGGGGGCTCTCAGCTGCCCATGGCC
AGTCTACTGGCTGGAAGCTCCACCCCACTGCTGTCCGCGGGCACCCCTGGCCTGCTGCCCACAGCATCAG
CCCCACCCCTGCTGCCTGCTGGAGCCCTGGTGGCCCCTTCACTGGGCAGCAATACAAGTCTAATGGCTGC
AGCGGCTGCAGCCGCAGCGGTGGCGGCGGCAGGCGGACCTCCAGTCCTCACTGCTCAGACCAACCCTTTT
CTCAGCCTGCCTGGGGCAGACGCCAGTGGGAATGGCCCCAAAGGAGGGACCGCTGACAAAGGAGCCTCAA
CCAGCCAGGAAAAAGGCTAA

Translation (1079 aa):
MKEMVGGCCVCSDERGWAENPLVYCDGHACSVAVHQACYGIVQVPTGPWFCRKCESQERAARVRCELCPH
KDGALKRTDNGGWAHVVCALYIPEVQFANVLTMEPIVLQYVPHDRFNKTCYICEEQGRESKAASGACMTC
NRHGCRQAFHVTCAQMAGLLCEEEVLEVDNVKYCGYCKYHFSKMKTSRHSSGGGGGAGGGSSGGGGGGSS
SASGGGGGTGGGSGNSFLSGRRSRSASPSTQPEKHPTHHEKGQKKSRKDKERLKQKHKKRPESPPSVLAP
PAVPTADKVSSATSSSHHEASTQETSESSRDSKGRKSSSHSLSHKDKKLGTGKGSSLQSSPDFAAFPKLE
QPEEDKYPKPADPTPPAPPSPTAPEPPKADLFEQKVVFSGFGPIMRFTTTASSSSRARAPSPGDYKSPHI
TGAGASAGTHKRMPALSATLGPAEEAPETTLKEKKHKASKRSRHGPGRPKGSRGKEGASGPTASLPAAQL
AGFTATAASPFSGGSLVSAGLGGLASRTFGPSGSLPSLSLESSLLGAGIYTSNKDPISHGGGMLRAVCST
PLSSSLLGPTGTSALPRLSRSPFTSTLASSSASISTTQVFSLAGSTFSLPSSHIFGTPMGTVNPLLTQAE
SSHTEPDLEDCSFRCHGTSPQESLSSMSPISSLPALFDQTSAPCAGGQLDSTAPGTTNMEQLLEKQGDGE
AGVNIVEMLKALHALQKENQRLQEQILSLTAKKERLQVLNVQLSVPFPALPAALPATNGPIPGPYGLLPQ
AGSSDSLSVSKSPPGKNSLGLDNSLSTSSEDPHSGCPSRSSSSLSFHSTPPPLPLLQQSPATLPLALPGA
PAPLPPQPQNGLGRAPGATGLGAMPMAEGLLGGLAGSGSLPLNGLLGGLNGAAAPNPAGLSQAGGAPTLQ
LPGCLNSLTEQQRHLLQQQEQQLQQLQQLLASPQLTPEHQTVVYQMIQQMQQKRELQRLQMAGGSQLPMA
SLLAGSSTPLLSAGTPGLLPTASAPPLLPAGALVAPSLGSNTSLMAAAAAAAAVAAAGGPPVLTAQTNPF
LSLPGADASGNGPKGGTADKGASTSQEKG


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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