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Report for CCDS36233.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
36233.1 Public Mus musculus 11 Ankrd13b 23 108 98 CCDS HistoryNCBI Gene:268445Re-query CCDS DB by CCDS ID:36233.1Re-query CCDS DB by GeneID:268445See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 36233.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000092892.9 ENSMUSP00000090568.3 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000092892.9Link to Ensembl Protein Viewer:ENSMUSP00000090568.3Re-query CCDS DB by Nucleotide ID:ENSMUST00000092892Re-query CCDS DB by Protein ID:ENSMUSP00000090568
Original member Current member NCBI NM_172945.2 NP_766533.2 Accepted alive Link to Nucleotide Sequence:NM_172945.2Link to Protein Sequence:NP_766533.2Re-query CCDS DB by Nucleotide ID:NM_172945Re-query CCDS DB by Protein ID:NP_766533Link to BLAST:NP_766533.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_766533.2 696 Q5F259-2 696 100% 0 0

Chromosomal Locations for CCDS 36233.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 11 (NC_000077.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 77471606 77471878 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 77472014 77472179 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 77472302 77472378 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 77472449 77472612 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 77472725 77472877 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 77473011 77473168 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 77473281 77473411 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 77473580 77473644 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 77474523 77474604 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 77476183 77476249 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 77476327 77476516 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 77476602 77476745 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 77477291 77477336 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 77477420 77477544 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 77477643 77477778 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 77489439 77489552 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2091 nt):
ATGATCCCCGCCAACGCCTCCGCCAGGAAGGGGCCCGAGGGCAAGTACCCGCTGCACTACCTCGTGTGGC
ACAACCGCCACCGGGAGCTGGAGAAGGAGGTCCGCGCCGGCCAGGTGGACATTGAACAACTAGATCCCCG
AGGCCGGACTCCTCTGCACCTGGCTACCACCCTGGGGCACCTGGAATGTGCCCGTGTGCTCTTGGCACAT
GGTGCAGATGTGGGCAGGGAGAATCGCAGTGGTTGGACAGTGCTGCAGGAGGCTGTGAGCACCAGGGACC
TTGAGCTGGTGCAGCTGGTGCTGCGGTACAGGGACTACCAGCGGGTGGTGAAGCGACTGGCGGGTATCCC
CATGCTCCTGGAGAAGCTACGAAAGGCCCAGGATTTCTATGTGGAGATGAAGTGGGAGTTCACAAGTTGG
GTGCCTCTGGTATCCAAGATTTGCCCTAGTGACACATACAAAGTGTGGAAGAGTGGGCAGAACCTGAGGG
TAGACACCACGCTTTTGGGCTTTGACCATATGACCTGGCAGAGGGGGAATCGCAGCTTCGTCTTCAGAGG
TCAAGACACAAGTGCTGTGGTCATGGAGATTGACCATGACCGCCGCGTGGTGTACATGGAGACCCTGGCG
CTGGCCGGGCAGGATCGGGAGCTACTGCTGGCTGCCGCCCAGCCCTCGGAGGAACAGGTGCTGAGCAGGC
TTACTGCGCCCGTTGTCACCACACAGCTCGACACCAAGAACATCTCCTTTGAGAGGAACAAGACTGGCAT
TCTGGGCTGGCGCAGTGAGAAGACAGAGATGGTGAACGGGTACGAGGCCAAGGTATACGGGGCCTCCAAT
GTGGAGCTCATCACCCGGACACGGACAGAGCATCTTTCGGAACAACATAAAGGCAAAGTCAAAGGTTGTA
AGACACCTCTGCAGTCTTTCCTGGGAATTGCCGAGCAGCACGGGGGACCCCAAAATGGGACCCTGATCAC
TCAGACTCTGAGCCAAGCCAACCCCCCTGCCATCACTGCAGAGGAATACTTCAACCCCAACTTTGAGCTT
GGCAACCGGGCCATGGGACGTCCCATGGAGCTGACCACCAAGACGCAGAAGTTCAAGGCCAAGCTGTGGC
TGTGTGAGGAGCACCCCCTGTCCCTGTGTGAGCAGGTGGCTCCCATCATTGACCTCATGGCTGTCAGCAA
CGCACTTTTTGCCAAGCTCCGGGACTTCATCACGTTGCGCCTGCCTCCTGGCTTCCCAGTCAAGATTGAA
ATCCCGATTTTTCACATCCTCAACGCCCGCATCACCTTCGGGAACCTCAATGGCTGCGATGAGCCAGTGC
CCTCGGTGCGAGGTAGCCCCGGCAGCGAGACGCCCTCCCCTGGCAGTGACTCTTCCAGCGTCAGCAGCTC
CAGCTCTACCACCTCCTGTCGTGCCTGTGAGATCTCCCCTGCACTGTTCGAGGCCCCACGTGGCTACAGT
GTGCTGGGCGGCCAGCGAGAGGCTGTGCCTCGTGATGAAGATGATGACCTGCTGCGGTTTGCCATCCAGC
AGAGCCTGCTTGAGGCGGGCAGTGAGTATGACCAGGTCACCATCTGGGAGGCGCTAACCAACAGCAAGCC
AGGCACCCACCCCATGTCCTATGAAGGCCGCCGACAGGACAGGCCCAGAGAACCCTCAGTGCCTTCAACA
CCTGGTATCGAGAACCCGTTATCAAGATGGCTTCTGCCAACCCCCTTTCCTGGCACAGGGAGGGTGGCCA
GTGCTCCAGGCATGTGCAGAGATCAGGGACCTAGCTCCCTGGACCTTCAGACCCTCAACAACAGACAGGT
GTCCCAGGTGTGCCGGGAGCGGGGAGCGCTCGACAAATCCTCCCCGCCCCCAGGAGCGCCCCACCCACGC
CGCAGCGCCAGCCCATGCCCCCGGCTCCAGTGCCCAGCCCTCGGCCCAGCCCAGGTCCCGGCTCCAGCAG
CCATGTGTTCCGGAGCTACGACGAGCAGCTGCGGCTGGCTATGGAGTTGTCCGCTCAGGAGCAGGAGGAG
AGGCGGCGGCGAGTGCGCCAGGAGGAGGAAGAGTTGGAGCGGATCCTGCGGCTCTCGCTGA

Translation (696 aa):
MIPANASARKGPEGKYPLHYLVWHNRHRELEKEVRAGQVDIEQLDPRGRTPLHLATTLGHLECARVLLAH
GADVGRENRSGWTVLQEAVSTRDLELVQLVLRYRDYQRVVKRLAGIPMLLEKLRKAQDFYVEMKWEFTSW
VPLVSKICPSDTYKVWKSGQNLRVDTTLLGFDHMTWQRGNRSFVFRGQDTSAVVMEIDHDRRVVYMETLA
LAGQDRELLLAAAQPSEEQVLSRLTAPVVTTQLDTKNISFERNKTGILGWRSEKTEMVNGYEAKVYGASN
VELITRTRTEHLSEQHKGKVKGCKTPLQSFLGIAEQHGGPQNGTLITQTLSQANPPAITAEEYFNPNFEL
GNRAMGRPMELTTKTQKFKAKLWLCEEHPLSLCEQVAPIIDLMAVSNALFAKLRDFITLRLPPGFPVKIE
IPIFHILNARITFGNLNGCDEPVPSVRGSPGSETPSPGSDSSSVSSSSSTTSCRACEISPALFEAPRGYS
VLGGQREAVPRDEDDDLLRFAIQQSLLEAGSEYDQVTIWEALTNSKPGTHPMSYEGRRQDRPREPSVPST
PGIENPLSRWLLPTPFPGTGRVASAPGMCRDQGPSSLDLQTLNNRQVSQVCRERGALDKSSPPPGAPHPR
RSASPCPRLQCPALGPAQVPAPAAMCSGATTSSCGWLWSCPLRSRRRGGGECARRRKSWSGSCGSR


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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