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Report for CCDS21403.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
21403.1 Public Mus musculus 7 Ap3b2 23 108 98 CCDS HistoryNCBI Gene:11775Re-query CCDS DB by CCDS ID:21403.1See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 21403.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000082090.14 ENSMUSP00000080739.7 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000082090.14Link to Ensembl Protein Viewer:ENSMUSP00000080739.7Re-query CCDS DB by Nucleotide ID:ENSMUST00000082090Re-query CCDS DB by Protein ID:ENSMUSP00000080739
Original member Current member NCBI NM_021492.3 NP_067467.2 Accepted alive Link to Nucleotide Sequence:NM_021492.3Link to Protein Sequence:NP_067467.2Re-query CCDS DB by Nucleotide ID:NM_021492Re-query CCDS DB by Protein ID:NP_067467Link to BLAST:NP_067467.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_067467.2 1082 Q9JME5 1082 100% 0 0

Chromosomal Locations for CCDS 21403.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 81460651 81460801 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 81460928 81461066 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 81462904 81463001 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 81463241 81463325 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 81463684 81463912 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 81464091 81464197 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 81464442 81464502 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 81464631 81464811 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 81465140 81465257 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 81465657 81465765 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 81466171 81466289 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 81467435 81467621 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 81471822 81471998 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 81473000 81473109 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 81473387 81473519 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 81473857 81473919 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 81476280 81476351 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 81476741 81476795 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 81476946 81477229 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 81477316 81477498 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 81477588 81477654 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 81477906 81478066 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 81484426 81484521 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 81484836 81484910 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 81485034 81485109 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 81493508 81493620 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3249 nt):
ATGTCGGCCGCTCCGGCCTACAGCGAAGACAAGGGCGGCTCAGCCGGTCCCGGGGAGCCAGAATATGGCC
AC
GACCCGGCGAGCGGCGGTATCTTCTCCTCGGACTACAAGCGGCATGATGACCTGAAAGAGATGTTGGA
C
ACCAACAAGGACTCCCTCAAGCTGGAGGCCATGAAGAGGATTGTGGCAATGATCGCCCGGGGAAAGAAT
GCC
TCGGACCTGTTCCCTGCAGTGGTGAAGAATGTGGCCTGTAAGAACATAGAGGTGAAGAAGCTTGTCT
AC
GTGTATCTGGTCCGATATGCCGAGGAGCAGCAAGACCTCGCTCTACTGTCCATCTCTACTTTCCAACG
T
GGCCTAAAGGATCCCAACCAGCTGATCCGTGCCAGTGCGCTCCGGGTTCTCTCTAGCATCCGTGTGCCC
ATC
ATAGTGCCCATCATGATGCTAGCCATCAAGGAAGCTGCCTCGGACATGTCACCCTACGTTCGGAAAA
CA
GCTGCTCATGCCATCCCCAAACTCTACAGTTTGGACTCCGATCAGAAGGACCAGCTGATAGAAGTCAT
T
GAGAAGCTTTTGGCAGATAAGACCACGCTGGTGGCAGGCAGTGTAGTGATGGCCTTTGAAGAGGTATGT
CCA
GAACGTATTGACCTGATTCACAAAAACTACCGGAAGCTCTGCAACCTGCTCATTGATGTGGAGGAGT
GG
GGCCAGGTGGTGATTATCAGCATGCTCACGCGTTATGCGCGAACGCAATTCCTGAGCCCTACGCAGAA
T
GAGTCCTTGCTGGAGGAGAATCCCGAGAAGGCCTTCTATGGCTCCGAGGAGGACGAGGCCAAAGGCCCT
GGA
TCAGAGGAGGCAGCCACTGCGGCGCTGCCCGCTCGGAAGCCCTATGTAATGGACCCAGATCACCGGC
TG
CTGCTGCGGAACACCAAGCCCCTGCTGCAGAGCCGCAGCGCCGCGGTGGTCATGGCGGTGGCGCAGCT
T
TACTTCCACCTAGCGCCTAAGGCAGAGGTGGGCGTCATCGCCAAGGCGCTGGTACGCCTGCTGCGCAGC
CAC
AGTGAGGTGCAGTACGTAGTGCTCCAGAACGTGGCCACCATGTCCATCAAGCGCAGGGGTATGTTTG
AA
CCCTACCTGAAGAGCTTCTACATTAGGTCCACGGATCCTACCCAGATCAAGATCCTGAAGCTGGAAGT
G
CTGACCAACCTGGCCAATGAGACTAACATCCCCACTGTTCTCCGGGAATTCCAGACCTACATTCGCAGC
ATG
GACAAAGACTTTGTGGCAGCCACGATCCAGGCCATTGGACGATGTGCAACGAACATAGGCCGAGTCC
GT
GACACCTGTCTCAATGGCTTGGTGCAGCTTCTGTCCAACCGTGACGAGCTTGTGGTTGCAGAGTCAGT
G
GTGGTCATTAAGAAGCTGCTGCAAATGCAGCCAGCGCAGCACGGTGAGATCATCAAACACTTGGCAAAG
CTC
ACAGACAACATCCAGGTGCCCATGGCACGAGCCAGCATCCTCTGGCTCATTGGAGAGTACTGTGAGC
AT
GTCCCCAAGATCGCACCTGATGTCCTGAGAAAAATGGCCAAGTCCTTCACAGCAGAGGAGGACATCGT
G
AAGCTGCAGGTCATCAACCTGGCAGCCAAGCTGTACCTGACTAACTCAAAGCAGACCAAGCTCTTGACC
CAG
TATGTGCTGAGTCTGGCCAAGTACGACCAGAACTATGATATCCGGGATCGAGCCCGCTTCACCCGGC
AG
CTCATTGTTCCCTCTGAGCAGGGTGGTGCCCTCAGTCGCCATGCCAAGAAACTCTTCCTGGCCCCTAA
G
CCAGCCCCTATCTTGGAGTCATCCTTCAAAGATCGTGACCATTTCCAGCTGGGCTCACTGTCACACCTG
CTC
AATGCAAAGGCTACAGGCTACCAGGAGCTCCCGGACTGGCCAGAGGAAGCCCCAGATCCATCTGTGC
GC
AATGTGGAGGTACCTGAATGGACCAAATGTTCAAATCGGGAGAAGAGGAAGGAGAAGGAAAAGCCTTT
C
TATTCTGACTCCGAGGGGGAGTCTGGCCCCACTGAGTCTGCAGACAGCGAGCCTGAATCTGAGAGTGAG
TCA
GAGAGTAAGAGCAGCAGTGGGAGTGGCTCCGGGGAGTCTAGCAGTGAGTCGGACAATGAAGAAGAGG
AT
GAGGAGAAAGGCGGAGGCAGCGAGAGTGAACAGAGTGAGGAGGAAGATGAGAAGAAGAAGAAGACAAA
G
AAGAAGAAGGCATCAGAGGGACACAGAGAAGGCTCATCATCAGAAGAGGGCAGTGACTCCAGCAGCAGC
TCA
GAGTCTGAGGTGACGTCAGAGTCGGAGGAGGAACAGGTGGAACCTGCCTCCTGGAGGAAGAAAACGC
CT
CCAGGCAGCAAGAGTGCCCCTGTAGCCAAGGAGATTTCCCTGCTGGACCTAGAGGATTTCACCCCTCC
T
AGTGTCCAGCCTGTGTCTCCTCCCATGGTTGTGTCTACCAGTCTGGCTGCTGACCTGGAAGGGCTGACA
CTC
ACAGACTCCTCTCTGGTGCCTTCGCTGCTGAGTCCAGTGTCCAGCATTGGGAGGCAGGAGCTGCTGC
AC
CGGGTAGCTGGAGAGGGGCTGTCTGTGGACTATGCCTTCAGCCGCCAGCCTTTCTCTGGGGATCCCCA
C
ATGGTGTCTCTGCATATCTACTTCTCCAACAACTCGGAGACTCCCATCAAGGGGCTGCATGTGGGCACT
CCC
AAGCTGCCTGCTGGCATCAGCATTCAAGAATTCCCTGAAATCGAGTCCCTGGCACCTGGAGAATCCA
CC
ACTACTGTGATGGGCATTAACTTCTGCGACTCAACCCAGGCAGCCAACTTCCAGCTGTGCACCCAAAC
C
CGACAGTTCTATGTCTCCATTCAGCCACCTGTCGGGGAGCTGATGGCCCCTGTATTTATGAGTGAGAAT
GAG
TTCAAGAAGGAACAGGGAAAGCTGACAGGCATGAATGAGATCACAGAGAAGCTTACATTGCCAGACA
CC
TGTCGAAGTGATCACATGGTGGTGCAGAAAGTGACTGCCACCGCCAACCTAGGTCGTGTCCCATGTGG
G
ACATCTGATGAGTACAGGTTTGCAGGGAGGACATTAACTAGTGGGAGTCTGGTCCTGCTGACTCTGGAT
GCC
CGGGCAGCTGGAGCCGCCCAGCTGACCGTCAACAGTGAGAAGATGGTGATTGGCACCATGCTGGTGA
AG
GATGTGATTCAGGCTCTGACCCAGTGA


Translation (1082 aa):
MSAAPAYSEDKGGSAGPGEPEYGHDPASGGIFSSDYKRHDDLKEMLDTNKDSLKLEAMKRIVAMIARGKN
A
SDLFPAVVKNVACKNIE
VKKLVYVYLVRYAEEQQDLALLSISTFQRGLKDPNQLIRASALRVLSSIRVP
I
IVPIMMLAIKEAASDMSPYVRKTAAHAIPKLY
SLDSDQKDQLIEVIEKLLADKTTLVAGSVVMAFEEVC
P
ERIDLIHKNYRKLCNLLIDVEEWGQVVIISMLTRYARTQFLSPTQN
ESLLEENPEKAFYGSEEDEAKGP
G
SEEAATAALPARKPYVMDPDHRLLLRNTKPLLQSRSAAVVMAVAQLYFHLAPKAEVGVIAKALVRLLRS
H
SEVQYVVLQNVATMSIKRRGMFEPYLKSFYIRSTDPTQIKILKLEVLTNLANETNIPTVLREFQTYIRS
M
DKDFVAATIQAIGRCATNIGRVRDTCLNGLVQLLSNRD
ELVVAESVVVIKKLLQMQPAQHGEIIKHLAK
L
TDNIQ
VPMARASILWLIGEYCEHVPKIAPDVLRKMAKSFTAEEDIVKLQVINLAAKLYLTNSKQTKLLT
Q
YVLSLAKYDQNYDIRDRARFTRQLIVPSEQGGALSRHAKKLFLAPKPAPILESSFK
DRDHFQLGSLSHL
L
NAKATGYQELPDWPEEAPDPSVRNVE
VPEWTKCSNREKRKEKEKPFYSDSEGESGPTESADSEPESESE
S
ESKSSSGSGSGESSSESDNEEEDEEKGGGSE
SEQSEEEDEKKKKTKKKKASEGHREGSSSEEGSDSSSS
S
ESEVTSESEEEQVEPASWRKKT
PPGSKSAPVAKEISLLDLEDFTPPSVQPVSPPMVVSTSLAADLEGLT
L
TDSSLVPS
LLSPVSSIGRQELLHRVAGEGLSVDYAFSRQPFSGDPHMVSLHIYFSNNSETPIKGLHVGT
P
KLPAGISIQEFPEI
ESLAPGESTTTVMGINFCDSTQAANFQLCTQTRQFYVSIQPPVGELMAPVFMSEN
E
FKKEQ
GKLTGMNEITEKLTLPDTCRSDHMVVQKVTATANLGRVPCGTSDEYRFAGRTLTSGSLVLLTLD
A
RAAGAAQLTVNSEKMVIGTMLVKDVIQALTQ




Links Key
 Links to:   History report
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  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser