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Report for CCDS60458.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
60458.1 Public Homo sapiens 1 RGS7 24 110 108 CCDS HistoryNCBI Gene:6000Re-query CCDS DB by CCDS ID:60458.1Re-query CCDS DB by GeneID:6000See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 14, NCBI annotation release 105, Ensembl annotation release 73

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 60458.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000366564.5 ENSP00000355522.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000366564.5Link to Ensembl Protein Viewer:ENSP00000355522.1Re-query CCDS DB by Nucleotide ID:ENST00000366564Re-query CCDS DB by Protein ID:ENSP00000355522
Original member Current member NCBI NM_001282778.2 NP_001269707.1 Accepted alive Link to Nucleotide Sequence:NM_001282778.2Link to Protein Sequence:NP_001269707.1Re-query CCDS DB by Nucleotide ID:NM_001282778Re-query CCDS DB by Protein ID:NP_001269707Link to BLAST:NP_001269707.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001269707.1 469 P49802-2 469 100% 0 0

Chromosomal Locations for CCDS 60458.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 240776163 240776213 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 240802904 240802993 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 240806140 240806326 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 240811918 240812043 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 240813618 240813728 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 240814716 240814777 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 240816317 240816415 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 240827098 240827172 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 240868587 240868668 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 240868776 240868852 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 240870055 240870119 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 240930717 240930768 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 240936600 240936706 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 240983079 240983129 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 241098666 241098762 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 241355699 241355776 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1410 nt):
ATGGCCCAGGGGAATAATTATGGGCAGACCAGCAACGGGGTGGCCGATGAATCACCCAACATGCTGGTGT
ACAGAAAGATGGAAGACGTCATAGCACGGATGCAAGATGAAAAAAATGGAATTCCTATTCGTACGGTCAA
AAGCTTTCTTTCCAAGATACCTAGCGTCTTCTCTGGTTCAGACATTGTTCAATGGTTGATAAAGAACTTA
ACTATAGAAGATCCAGTGGAGGCGCTCCATTTGGGAACATTAATGGCTGCCCACGGCTACTTCTTTCCAA
TCTCAGATCATGTCCTCACACTCAAGGATGATGGCACCTTTTACCGGTTTCAAACCCCCTATTTTTGGCC
ATCAAATTGTTGGGAGCCGGAAAACACAGATTATGCCGTTTACCTCTGCAAGAGAACAATGCAAAACAAG
GCACGACTGGAGCTCGCAGACTATGAGGCTGAGAGCCTGGCCAGGCTGCAGAGAGCATTTGCCCGGAAGT
GGGAGTTCATTTTCATGCAAGCAGAAGCACAAGCAAAAGTGGACAAGAAGAGAGACAAGATTGAAAGGAA
GATCCTTGACAGCCAAGAGAGAGCGTTCTGGGACGTGCACAGGCCCGTGCCTGGATGTGTAAATACAACT
GAAGTGGACATTAAGAAGTCATCCAGAATGAGAAACCCCCACAAAACACGGAAGTCTGTCTATGGTTTAC
AAAATGATATTAGAAGTCACAGTCCTACCCACACACCCACACCAGAAACTAAACCTCCAACAGAAGATGA
GTTACAACAACAGATAAAATATTGGCAAATACAGTTAGATAGACATCGGTTAAAAATGTCAAAAGTCGCT
GACAGTCTACTAAGTTACACGGAACAGTATTTAGAATACGACCCGTTTCTTTTGCCACCTGACCCTTCTA
ACCCATGGCTGTCCGATGACACCACTTTCTGGGAACTTGAGGCAAGCAAAGAACCGAGCCAGCAGAGGGT
AAAACGATGGGGTTTTGGCATGGACGAGGCATTGAAAGACCCAGTTGGGAGAGAACAGTTCCTTAAATTT
CTAGAGTCAGAATTCAGCTCGGAAAATTTAAGATTCTGGCTGGCAGTGGAGGACCTGAAAAAGAGGCCTA
TTAAAGAAGTACCCTCAAGAGTTCAGGAAATATGGCAAGAGTTTCTGGCTCCCGGAGCCCCCAGTGCTAT
TAACTTGGATTCCAAGAGTTATGACAAAACCACACAGAACGTGAAGGAACCTGGACGATACACATTTGAA
GATGCTCAGGAGCACATTTACAAACTGATGAAAAGTGATTCATACCCACGTTTTATAAGATCCAGTGCCT
ATCAGGAGCTTCTACAGGCAAAGAAAAAGGGGAAATCTCTCACGTCCAAGAGGTTAACAAGCCTTGCTCA
GTCTTACTAA

Translation (469 aa):
MAQGNNYGQTSNGVADESPNMLVYRKMEDVIARMQDEKNGIPIRTVKSFLSKIPSVFSGSDIVQWLIKNL
TIEDPVEALHLGTLMAAHGYFFPISDHVLTLKDDGTFYRFQTPYFWPSNCWEPENTDYAVYLCKRTMQNK
ARLELADYEAESLARLQRAFARKWEFIFMQAEAQAKVDKKRDKIERKILDSQERAFWDVHRPVPGCVNTT
EVDIKKSSRMRNPHKTRKSVYGLQNDIRSHSPTHTPTPETKPPTEDELQQQIKYWQIQLDRHRLKMSKVA
DSLLSYTEQYLEYDPFLLPPDPSNPWLSDDTTFWELEASKEPSQQRVKRWGFGMDEALKDPVGREQFLKF
LESEFSSENLRFWLAVEDLKKRPIKEVPSRVQEIWQEFLAPGAPSAINLDSKSYDKTTQNVKEPGRYTFE
DAQEHIYKLMKSDSYPRFIRSSAYQELLQAKKKGKSLTSKRLTSLAQSY


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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