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Report for CCDS36692.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
36692.1 Public Mus musculus 13 Tpbpb 23 108 98 CCDS HistoryNCBI Gene:116913Re-query CCDS DB by CCDS ID:36692.1See the combined annotation on chromosome 13 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 36692.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000080766.7 ENSMUSP00000079588.6 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000080766.7Link to Ensembl Protein Viewer:ENSMUSP00000079588.6Re-query CCDS DB by Nucleotide ID:ENSMUST00000080766Re-query CCDS DB by Protein ID:ENSMUSP00000079588
Original member Current member EBI ENSMUST00000223698.1 ENSMUSP00000153438.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000223698.1Link to Ensembl Protein Viewer:ENSMUSP00000153438.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000223698Re-query CCDS DB by Protein ID:ENSMUSP00000153438
Original member Current member NCBI NM_026429.4 NP_080705.1 Accepted alive Link to Nucleotide Sequence:NM_026429.4Link to Protein Sequence:NP_080705.1Re-query CCDS DB by Nucleotide ID:NM_026429Re-query CCDS DB by Protein ID:NP_080705Link to BLAST:NP_080705.1

Chromosomal Locations for CCDS 36692.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 13 (NC_000079.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13See the combined annotation on chromosome 13 in Sequence Viewer

Chromosome Start Stop Links
13 60901555 60901563 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 60901860 60901997 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 60902095 60902214 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 60902537 60902635 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (366 nt):
ATGACTCCTACAGTCTTCTTGGTCATCCTGTGCCTGGGTGTGGCCTCAGCTGCTATAATCCCTGAACCAA
CTTTGGATACTGAAGTGCAAGAGCAGAAGGATAAAGAAGGACTCAAAAAAGCAACGTGGAATGAGTTTGT
CATGAAACTGAACAATAGCAAAAATGACCAGGAGAAGGATGGCATCGACATAGAATTGAGAGTCTTCTTT
GGTCAGCTGACTGATGAAGAACTAATGAAAATAATGACTAACATTTTCCACCCAATGTTGGAAGAGGAGA
AAACACAGCCAGTTGTTGATGACCCTGAATTTGAGGATTACACAGAGAGTGGCGATGGGTTTTTTGTACC
AAATCAGCCACAGTAA

Translation (121 aa):
MTPTVFLVILCLGVASAAIIPEPTLDTEVQEQKDKEGLKKATWNEFVMKLNNSKNDQEKDGIDIELRVFF
GQLTDEELMKIMTNIFHPMLEEEKTQPVVDDPEFEDYTESGDGFFVPNQPQ


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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