NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS73795.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
73795.1 Public Homo sapiens 16 NPRL3 24 110 108 CCDS HistoryNCBI Gene:8131Re-query CCDS DB by CCDS ID:73795.1Re-query CCDS DB by GeneID:8131See the combined annotation on chromosome 16 in Sequence Viewer

Public since: CCDS release 17, NCBI annotation release 106, Ensembl annotation release 76

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 73795.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000611875.5 ENSP00000478273.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000611875.5Link to Ensembl Protein Viewer:ENSP00000478273.1Re-query CCDS DB by Nucleotide ID:ENST00000611875Re-query CCDS DB by Protein ID:ENSP00000478273
Original member Current member NCBI NM_001077350.3 NP_001070818.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001077350.3Link to Protein Sequence:NP_001070818.1Re-query CCDS DB by Nucleotide ID:NM_001077350Re-query CCDS DB by Protein ID:NP_001070818Link to BLAST:NP_001070818.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001070818.1 569 Q12980 569 100% 0 0

Chromosomal Locations for CCDS 73795.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 16 (NC_000016.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16See the combined annotation on chromosome 16 in Sequence Viewer

Chromosome Start Stop Links
16 86705 86870 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 88698 88890 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 89713 89902 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 92596 92725 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 93219 93325 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 98145 98301 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 100372 100509 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 110525 110606 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 112622 112775 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 117301 117375 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 119126 119255 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 130522 130591 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 138150 138267 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1710 nt):
ATGCGGGACAACACCAGCCCCATCAGCGTGATTCTGGTGAGCTCGGGGAGCAGGGGCAATAAGCTGCTGT
TCAGGTACCCCTTCCAGAGAAGCCAGGAGCACCCGGCGTCCCAGACAAGTAAGCCGCGTAGCAGATACGC
TGCCAGCAACACGGGCGACCATGCTGATGAGCAGGACGGCGATTCCAGGTTTTCAGATGTTATTCTGGCA
ACAATTTTGGCAACCAAGTCTGAAATGTGTGGCCAAAAATTTGAACTGAAGATTGATAATGTGCGATTTG
TTGGGCACCCAACACTGCTACAGCATGCTCTGGGGCAGATCTCCAAAACAGATCCTTCCCCGAAGAGGGA
AGCACCTACTATGATTCTTTTTAATGTGGTGTTTGCACTGAGGGCCAACGCAGACCCGTCAGTGATAAAC
TGTCTGCATAACCTGTCCCGTCGTATCGCCACCGTGCTGCAGCACGAGGAGCGCCGCTGCCAGTACCTCA
CCCGGGAGGCCAAGCTGATCCTGGCGCTCCAGGATGAGGTGTCCGCCATGGCTGATGGAAATGAAGGTCC
TCAGTCCCCATTCCATCACATCCTGCCCAAGTGCAAGCTGGCCAGGGACCTCAAGGAAGCTTATGACAGC
CTGTGCACGTCGGGCGTAGTTCGGCTTCACATCAACAGCTGGCTGGAGGTGAGCTTCTGCCTGCCCCACA
AGATCCACTATGCGGCCTCCAGTCTGATCCCCCCAGAGGCCATCGAACGGAGCCTGAAAGCCATCCGCCC
CTACCATGCCCTGCTGCTGCTCAGTGATGAGAAGTCCTTGCTGGGTGAGCTTCCTATTGACTGCTCCCCT
GCCCTAGTGCGGGTGATCAAGACCACATCTGCTGTGAAGAACCTGCAGCAGCTAGCCCAAGATGCGGACC
TGGCCTTGCTGCAGGTTTTCCAGCTTGCAGCTCATCTGGTGTACTGGGGCAAGGCCATCATCATCTACCC
GCTGTGTGAGAACAACGTCTACATGCTGTCTCCCAATGCCAGCGTATGTCTGTACTCCCCGCTGGCCGAG
CAGTTCTCCCACCAGTTCCCATCTCATGACCTGCCGTCCGTTCTTGCCAAGTTCTCCTTGCCGGTCTCCT
TGTCAGAATTTAGGAATCCCCTGGCCCCCGCTGTGCAGGAGACCCAGCTCATCCAGATGGTGGTGTGGAT
GCTGCAGCGCCGGCTTCTCATCCAGCTGCACACCTATGTCTGCCTGATGGCCTCACCCAGCGAGGAGGAG
CCCCGTCCGCGAGAGGACGACGTCCCCTTCACTGCCCGGGTCGGCGGTCGCAGCCTCAGCACGCCCAACG
CCCTCAGCTTTGGCTCCCCAACCAGCAGCGATGACATGACCCTCACCAGCCCCAGCATGGACAACTCCAG
CGCAGAGCTACTTCCCAGCGGGGACTCGCCACTGAACCAGAGGATGACGGAGAACCTGCTGGCCAGCCTG
TCGGAGCATGAACGCGCAGCCATCCTCAGTGTACCCGCAGCCCAGAACCCTGAGGACCTCCGCATGTTTG
CCAGGCTCCTTCACTACTTCCGCGGCCGCCACCACCTGGAGGAGATTATGTACAACGAGAACACGCGGCG
CTCCCAGCTGCTCATGCTGTTTGACAAGTTCCGCAGCGTGCTGGTGGTGACCACCCACGAGGACCCTGTC
ATTGCCGTCTTCCAGGCTCTGCTCCCCTGA

Translation (569 aa):
MRDNTSPISVILVSSGSRGNKLLFRYPFQRSQEHPASQTSKPRSRYAASNTGDHADEQDGDSRFSDVILA
TILATKSEMCGQKFELKIDNVRFVGHPTLLQHALGQISKTDPSPKREAPTMILFNVVFALRANADPSVIN
CLHNLSRRIATVLQHEERRCQYLTREAKLILALQDEVSAMADGNEGPQSPFHHILPKCKLARDLKEAYDS
LCTSGVVRLHINSWLEVSFCLPHKIHYAASSLIPPEAIERSLKAIRPYHALLLLSDEKSLLGELPIDCSP
ALVRVIKTTSAVKNLQQLAQDADLALLQVFQLAAHLVYWGKAIIIYPLCENNVYMLSPNASVCLYSPLAE
QFSHQFPSHDLPSVLAKFSLPVSLSEFRNPLAPAVQETQLIQMVVWMLQRRLLIQLHTYVCLMASPSEEE
PRPREDDVPFTARVGGRSLSTPNALSFGSPTSSDDMTLTSPSMDNSSAELLPSGDSPLNQRMTENLLASL
SEHERAAILSVPAAQNPEDLRMFARLLHYFRGRHHLEEIMYNENTRRSQLLMLFDKFRSVLVVTTHEDPV
IAVFQALLP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH