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Report for CCDS16874.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
16874.1 Public Mus musculus 2 Angpt4 23 108 98 CCDS HistoryNCBI Gene:11602Re-query CCDS DB by CCDS ID:16874.1See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 16874.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000028955.5 ENSMUSP00000028955.5 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000028955.5Link to Ensembl Protein Viewer:ENSMUSP00000028955.5Re-query CCDS DB by Nucleotide ID:ENSMUST00000028955Re-query CCDS DB by Protein ID:ENSMUSP00000028955
Original member Current member NCBI NM_009641.2 NP_033771.1 Accepted alive Link to Nucleotide Sequence:NM_009641.2Link to Protein Sequence:NP_033771.1Re-query CCDS DB by Nucleotide ID:NM_009641Re-query CCDS DB by Protein ID:NP_033771Link to BLAST:NP_033771.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_033771.1 509 Q9WVH6 509 100% 0 0

Chromosomal Locations for CCDS 16874.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 2 (NC_000068.7)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 151911332 151911667 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 151925387 151925542 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 151927064 151927185 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 151929380 151929618 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 151934407 151934522 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 151936667 151936768 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 151938905 151939071 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 151943304 151943434 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 151944494 151944654 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1530 nt):
ATGCTCTGCCAGCCAGCTATGCTACTAGATGGCCTCCTCCTGCTGGCCACCATGGCTGCAGCCCAGCACA
GAGGGCCAGAAGCCGGTGGGCACCGCCAGATTCACCAGGTCCGGCGTGGCCAGTGCAGCTACACCTTTGT
GGTGCCGGAGCCTGATATCTGCCAGCTGGCGCCGACAGCGGCGCCTGAGGCTTTGGGGGGCTCCAATAGC
CTCCAGAGGGACTTGCCTGCCTCGAGGCTGCACCTAACAGACTGGCGAGCCCAGAGGGCCCAGCGGGCCC
AGCGTGTGAGCCAGCTGGAGAAGATACTAGAGAATAACACTCAGTGGCTGCTGAAGCTGGAGCAGTCCAT
CAAGGTGAACTTGAGGTCACACCTGGTGCAGGCCCAGCAGGACACAATCCAGAACCAGACAACTACCATG
CTGGCACTGGGTGCCAACCTCATGAACCAGACCAAAGCTCAGACCCACAAGCTGACTGCTGTGGAGGCAC
AGGTCCTAAACCAGACATTGCACATGAAGACCCAAATGCTGGAGAACTCACTGTCCACCAACAAGCTGGA
GCGGCAGATGCTGATGCAGAGCCGAGAGCTGCAGCGGCTGCAGGGTCGCAACAGGGCCCTGGAGACCAGG
CTGCAGGCACTGGAAGCACAACATCAGGCCCAGCTTAACAGCCTCCAAGAGAAGAGGGAACAACTGCACA
GTCTCCTGGGCCATCAGACCGGGACCCTGGCTAACCTGAAGCACAATCTGCACGCTCTCAGCAGCAATTC
CAGCTCCCTGCAGCAGCAGCAGCAGCAACTGACGGAGTTTGTACAGCGCCTGGTACGGATTGTAGCCCAG
GACCAGCATCCGGTTTCCTTAAAGACACCTAAGCCAGTGTTCCAGGACTGTGCAGAGATCAAGCGCTCCG
GGGTTAATACCAGCGGTGTCTATACCATCTATGAGACCAACATGACAAAGCCTCTCAAGGTGTTCTGTGA
CATGGAGACTGATGGAGGTGGCTGGACCCTCATCCAGCACCGGGAGGATGGAAGCGTAAATTTCCAGAGG
ACCTGGGAAGAATACAAAGAGGGTTTTGGTAATGTGGCCAGAGAGCACTGGCTGGGCAATGAGGCTGTGC
ACCGCCTCACCAGCAGAACGGCCTACTTGCTACGCGTGGAACTGCATGACTGGGAAGGCCGCCAGACCTC
CATCCAGTATGAGAACTTCCAGCTGGGCAGCGAGAGGCAGCGGTACAGCCTCTCTGTGAATGACAGCAGC
AGTTCAGCAGGGCGCAAGAACAGCCTGGCTCCTCAGGGCACCAAGTTCAGCACCAAAGACATGGACAATG
ATAACTGCATGTGTAAATGTGCTCAGATGCTGTCTGGAGGGTGGTGGTTTGATGCCTGTGGCCTCTCCAA
CCTCAATGGCATCTACTATTCAGTTCATCAGCACTTGCACAAGATCAATGGCATCCGCTGGCACTACTTC
CGAGGCCCCAGCTACTCACTGCACGGCACACGCATGATGCTGAGGCCAATGGGTGCCTGA

Translation (509 aa):
MLCQPAMLLDGLLLLATMAAAQHRGPEAGGHRQIHQVRRGQCSYTFVVPEPDICQLAPTAAPEALGGSNS
LQRDLPASRLHLTDWRAQRAQRAQRVSQLEKILENNTQWLLKLEQSIKVNLRSHLVQAQQDTIQNQTTTM
LALGANLMNQTKAQTHKLTAVEAQVLNQTLHMKTQMLENSLSTNKLERQMLMQSRELQRLQGRNRALETR
LQALEAQHQAQLNSLQEKREQLHSLLGHQTGTLANLKHNLHALSSNSSSLQQQQQQLTEFVQRLVRIVAQ
DQHPVSLKTPKPVFQDCAEIKRSGVNTSGVYTIYETNMTKPLKVFCDMETDGGGWTLIQHREDGSVNFQR
TWEEYKEGFGNVAREHWLGNEAVHRLTSRTAYLLRVELHDWEGRQTSIQYENFQLGSERQRYSLSVNDSS
SSAGRKNSLAPQGTKFSTKDMDNDNCMCKCAQMLSGGWWFDACGLSNLNGIYYSVHQHLHKINGIRWHYF
RGPSYSLHGTRMMLRPMGA


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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