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Report for CCDS36615.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
36615.1 Public Mus musculus 13 Vmn1r204 23 108 98 CCDS HistoryNCBI Gene:632793Re-query CCDS DB by CCDS ID:36615.1Re-query CCDS DB by GeneID:632793See the combined annotation on chromosome 13 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 36615.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000091728.1 ENSMUSP00000089321.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000091728.1Link to Ensembl Protein Viewer:ENSMUSP00000089321.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000091728Re-query CCDS DB by Protein ID:ENSMUSP00000089321
Original member Current member EBI ENSMUST00000228195.1 ENSMUSP00000154519.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000228195.1Link to Ensembl Protein Viewer:ENSMUSP00000154519.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000228195Re-query CCDS DB by Protein ID:ENSMUSP00000154519
Original member Current member NCBI NM_001045544.1 NP_001039009.1 Accepted alive Link to Nucleotide Sequence:NM_001045544.1Link to Protein Sequence:NP_001039009.1Re-query CCDS DB by Nucleotide ID:NM_001045544Re-query CCDS DB by Protein ID:NP_001039009Link to BLAST:NP_001039009.1

Chromosomal Locations for CCDS 36615.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 13 (NC_000079.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13See the combined annotation on chromosome 13 in Sequence Viewer

Chromosome Start Stop Links
13 22556201 22557109 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (909 nt):
ATGAAGATGATTTGGAGTGACCTCATCGCGGGGACAATTTTCCTTTCACTTATTTTACTTGGAGTTTTAG
GAAACAACATGTTATTTGTGAGACATTTATATGTAGTCATCATAGGTCCTGAGAAGAAAATAATAGATGT
TATTCTAGTCCACTTGGCTTTTGTAAACACAATCATTATTTATTGCATAGGTGTCAGAAACATAGCCACA
AGTTTTTACATCAGAAACTTCCTGGGTGATGTTGGTTGTAAAATTATAATTTATCTAGAAAGGGTTGCCC
GTGGCCTCTCTATCTGCACCACCTGTCTCCTCAGCGTGGTCCAGGCTGTCACCATCAGTCCCAGGACCAC
ACTGTGGAGAAAGTTCAAACCACAGACGGCATGGCATATTCTTGCCTTTCTCCTCCTCTTTTGGATATTT
AATACCCTGATAAGCTCCAATTTGCTTCACTATATCACAGCAGGCAGTAGCATGAACAGTTCTGAAGTTG
GGATGTTTACTGTGTATTGCTATATGCTGCCATCCAGGAACATAGTTAAATGGCTGTTCCTTTCTTTCAT
GGCTTTTCGTGATGTCATTTTCCAAAGTCTCATGGGCTGGAGCAGTGGGTCCATGGCTCTCCATCTGTAT
AAGCATCACAAGCGTGTCCTCTACCTCCACAGCTCCAGGTCTGCAAACAATGCCAGGCCAGAAATCAGAG
CTACACAGAGAGTTCTCACTCTCATGACCTGTTTTCTTTTCTTTTATTTGGCAGATTTCATTTTCTCCTT
ATACATAGGTTCCACAGTGACACATGACTCCACAATACTATATATTAAAGCATTTTTAGTACTTAGTTAT
GTTGGTCTCAGCCCCTTTGTCCTGATCATCTGGGATATTTGTGTTCCTAATCTCTGCTGTGTCCCCTGA

Translation (302 aa):
MKMIWSDLIAGTIFLSLILLGVLGNNMLFVRHLYVVIIGPEKKIIDVILVHLAFVNTIIIYCIGVRNIAT
SFYIRNFLGDVGCKIIIYLERVARGLSICTTCLLSVVQAVTISPRTTLWRKFKPQTAWHILAFLLLFWIF
NTLISSNLLHYITAGSSMNSSEVGMFTVYCYMLPSRNIVKWLFLSFMAFRDVIFQSLMGWSSGSMALHLY
KHHKRVLYLHSSRSANNARPEIRATQRVLTLMTCFLFFYLADFIFSLYIGSTVTHDSTILYIKAFLVLSY
VGLSPFVLIIWDICVPNLCCVP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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