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Report for CCDS27022.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
27022.1 Public Mus musculus 14 Or11h4b 23 108 98 CCDS HistoryNCBI Gene:258264Re-query CCDS DB by CCDS ID:27022.1Re-query CCDS DB by GeneID:258264See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 27022.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000078075.4 ENSMUSP00000077220.4 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000078075.4Link to Ensembl Protein Viewer:ENSMUSP00000077220.4Re-query CCDS DB by Nucleotide ID:ENSMUST00000078075Re-query CCDS DB by Protein ID:ENSMUSP00000077220
Original member Current member EBI ENSMUST00000205373.2 ENSMUSP00000145625.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000205373.2Link to Ensembl Protein Viewer:ENSMUSP00000145625.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000205373Re-query CCDS DB by Protein ID:ENSMUSP00000145625
Original member Current member EBI ENSMUST00000213238.1 ENSMUSP00000149081.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000213238.1Link to Ensembl Protein Viewer:ENSMUSP00000149081.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000213238Re-query CCDS DB by Protein ID:ENSMUSP00000149081
Original member Current member NCBI NM_207156.2 NP_997039.2 Accepted alive Link to Nucleotide Sequence:NM_207156.2Link to Protein Sequence:NP_997039.2Re-query CCDS DB by Nucleotide ID:NM_207156Re-query CCDS DB by Protein ID:NP_997039Link to BLAST:NP_997039.2

Chromosomal Locations for CCDS 27022.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 14 (NC_000080.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 50680691 50681632 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (942 nt):
ATGAACAGATCAGTAGCACATGTAACTGAATTTGTTCTCTTGGGATTTCCTGGTTCCTGGAAGATACAGA
TTTTCCTCTTCGTGTTGTTTTTGGTGTTTTATGTCTTGACATTGTTGGGAAATGGAGCCATCATCTGTGC
AGTAAGATGTGACTCACGTCTACATACCCCCATGTACTTCCTCCTGGGAAATTTTGCCTTCCTTGAAATC
TGGTATGTTTCCTCCACTATTCCTAACATACTAGCCAACATTCTGTCTAAGACCAAGGCCATCTCATTTT
CAGGGTGCTTCCTGCAGTTCTATTTCTTCTTTTCACTGGGTACAACTGAATGTCTCTTCCTGGCAGTAAT
GGCTTATGATAGGTACCTGGCCATTTGCCGCCCATTACATTACCCTACTATCATGACTAGGAGGCTGTGT
TGCATTCTGGTATCCTCATGCTGGCTCATTGGATTTCTTGGGTACCCAATCCCTATCTTCTCCATTTCCC
AGCTTCCCTTCTGTGGTTCTAATATCATTGATCACTTCCTCTGTGACATGGACCCATTGATGGCTTTGTC
CTGTGCCCCAGCTCCTATTACTGAATTTATTTTTTATGCCCAAAGTTCCTTTGTCCTCTTTTTCACTATT
GCATACATTCTTCGGTCCTATATTTTGTTGCTCAAGGCTATTTTTCAGGTTCCTTCTGCAGCTGGCCGAC
GAAAGGCCTTCTCTACCTGTGGTTCCCATTTAGTTGTGGTGTCACTCTTCTATGGGACAGTAATGATAAT
GTACATGAGTCCTACATATGGCATTTCAACTTTGATGCAGAAGATCCTTACACTTGTATACTCTGTAATG
ACTCCTCTCTTTAATCCTCTGATTTATAGCCTTCGTAACAAGGACATGAAACTTGCTCTGAGGAAAGTTC
TGTTAGGAATGAGAATTGTCAAAAATATATGA

Translation (313 aa):
MNRSVAHVTEFVLLGFPGSWKIQIFLFVLFLVFYVLTLLGNGAIICAVRCDSRLHTPMYFLLGNFAFLEI
WYVSSTIPNILANILSKTKAISFSGCFLQFYFFFSLGTTECLFLAVMAYDRYLAICRPLHYPTIMTRRLC
CILVSSCWLIGFLGYPIPIFSISQLPFCGSNIIDHFLCDMDPLMALSCAPAPITEFIFYAQSSFVLFFTI
AYILRSYILLLKAIFQVPSAAGRRKAFSTCGSHLVVVSLFYGTVMIMYMSPTYGISTLMQKILTLVYSVM
TPLFNPLIYSLRNKDMKLALRKVLLGMRIVKNI


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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